RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 GGNBP2Q9H3C7 697 aa27.31■■□□□ 1.96
SIGMAR1-202ENST00000353468 NRKQ7Z2Y5 1582 aa27.3■■□□□ 1.96
SIGMAR1-202ENST00000353468 MORC1Q86VD1 984 aa27.3■■□□□ 1.96
SIGMAR1-202ENST00000353468 MYBBP1AQ9BQG0 1328 aaKnown RBP27.3■■□□□ 1.96
SIGMAR1-202ENST00000353468 NME9Q86XW9 330 aa27.29■■□□□ 1.96
SIGMAR1-202ENST00000353468 TTC21AQ8NDW8 1320 aa27.29■■□□□ 1.96
SIGMAR1-202ENST00000353468 BRD4O60885 1362 aaPredicted RBP27.29■■□□□ 1.96
SIGMAR1-202ENST00000353468 KIF20BQ96Q89 1820 aa27.28■■□□□ 1.96
SIGMAR1-202ENST00000353468 BRINP3Q76B58 766 aa27.27■■□□□ 1.96
SIGMAR1-202ENST00000353468 KRT28Q7Z3Y7 464 aa27.24■■□□□ 1.95
SIGMAR1-202ENST00000353468 PAK3O75914 559 aaPredicted RBP27.23■■□□□ 1.95
SIGMAR1-202ENST00000353468 ZRANB1Q9UGI0 708 aa27.23■■□□□ 1.95
SIGMAR1-202ENST00000353468 ANKRD26Q9UPS8 1709 aa27.23■■□□□ 1.95
SIGMAR1-202ENST00000353468 NPHP3Q7Z494 1330 aa27.23■■□□□ 1.95
SIGMAR1-202ENST00000353468 PPP2R1AP30153 589 aa27.22■■□□□ 1.95
SIGMAR1-202ENST00000353468 XPCQ01831 940 aaPredicted RBP27.22■■□□□ 1.95
SIGMAR1-202ENST00000353468 COG3Q96JB2 828 aa27.22■■□□□ 1.95
SIGMAR1-202ENST00000353468 NLRP13Q86W25 1043 aa27.22■■□□□ 1.95
SIGMAR1-202ENST00000353468 TNNT2P45379 298 aaPredicted RBP27.21■■□□□ 1.95
SIGMAR1-202ENST00000353468 CCDC184Q52MB2 194 aa27.2■■□□□ 1.94
SIGMAR1-202ENST00000353468 DDX17Q92841 729 aaKnown RBP27.2■■□□□ 1.94
SIGMAR1-202ENST00000353468 ABTB2Q8N961 1025 aa27.19■■□□□ 1.94
SIGMAR1-202ENST00000353468 MRS2Q9HD23 443 aa27.18■■□□□ 1.94
SIGMAR1-202ENST00000353468 USP31Q70CQ4 1352 aa27.17■■□□□ 1.94
SIGMAR1-202ENST00000353468 OVOS2A0A0J9YW53 1432 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 OVOS2Q6IE36 1432 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 TOM1O60784 492 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 NLRP6P59044 892 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 IQSEC2Q5JU85 1478 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 PIK3C2AO00443 1686 aa27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
SIGMAR1-202ENST00000353468 TRPM3Q9HCF6 1732 aaPredicted RBP27.15■■□□□ 1.94
SIGMAR1-202ENST00000353468 CERKQ8TCT0 537 aa27.14■■□□□ 1.94
SIGMAR1-202ENST00000353468 SBNO1A3KN83 1393 aa27.13■■□□□ 1.93
SIGMAR1-202ENST00000353468 NUTM2GQ5VZR2 741 aa27.13■■□□□ 1.93
SIGMAR1-202ENST00000353468 PXDNQ92626 1479 aa27.12■■□□□ 1.93
SIGMAR1-202ENST00000353468 SOS2Q07890 1332 aaPredicted RBP27.11■■□□□ 1.93
SIGMAR1-202ENST00000353468 LMOD2Q6P5Q4 547 aa27.1■■□□□ 1.93
SIGMAR1-202ENST00000353468 MTHFSP49914 203 aa27.09■■□□□ 1.93
SIGMAR1-202ENST00000353468 ROBO1Q9Y6N7 1651 aa27.09■■□□□ 1.93
SIGMAR1-202ENST00000353468 UBAP1LF5GYI3 381 aa27.09■■□□□ 1.93
SIGMAR1-202ENST00000353468 FBLN1P23142 703 aa27.09■■□□□ 1.93
SIGMAR1-202ENST00000353468 AATKQ6ZMQ8 1374 aa27.08■■□□□ 1.93
SIGMAR1-202ENST00000353468 USP54Q70EL1 1684 aa27.08■■□□□ 1.92
SIGMAR1-202ENST00000353468 NHSL1Q5SYE7 1610 aa27.07■■□□□ 1.92
SIGMAR1-202ENST00000353468 SPATA31A3Q5VYP0 1347 aa27.07■■□□□ 1.92
SIGMAR1-202ENST00000353468 TNS3Q68CZ2 1445 aa27.06■■□□□ 1.92
SIGMAR1-202ENST00000353468 ALS2Q96Q42 1657 aa27.06■■□□□ 1.92
SIGMAR1-202ENST00000353468 POLKQ9UBT6 870 aa27.05■■□□□ 1.92
SIGMAR1-202ENST00000353468 MARF1Q9Y4F3 1742 aaKnown RBP27.05■■□□□ 1.92
SIGMAR1-202ENST00000353468 PIP4K2BP78356 416 aa27.04■■□□□ 1.92
SIGMAR1-202ENST00000353468 MAP2P11137 1827 aaKnown RBP27.03■■□□□ 1.92
SIGMAR1-202ENST00000353468 SOX12O15370 315 aa27.03■■□□□ 1.92
SIGMAR1-202ENST00000353468 RRS1Q15050 365 aaKnown RBP27.02■■□□□ 1.92
SIGMAR1-202ENST00000353468 PNISRQ8TF01 805 aaKnown RBP27.02■■□□□ 1.92
SIGMAR1-202ENST00000353468 ARHGEF10O15013 1369 aa27.02■■□□□ 1.92
SIGMAR1-202ENST00000353468 CFAP53Q96M91 514 aa27.01■■□□□ 1.91
SIGMAR1-202ENST00000353468 EMILIN1Q9Y6C2 1016 aa27.01■■□□□ 1.91
SIGMAR1-202ENST00000353468 AHDC1Q5TGY3 1603 aaPredicted RBP27■■□□□ 1.91
SIGMAR1-202ENST00000353468 USP19O94966 1318 aa27■■□□□ 1.91
SIGMAR1-202ENST00000353468 FAM9BQ8IZU0 186 aa27■■□□□ 1.91
SIGMAR1-202ENST00000353468 KCNH5Q8NCM2 988 aa27■■□□□ 1.91
SIGMAR1-202ENST00000353468 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
SIGMAR1-202ENST00000353468 SMG6Q86US8 1419 aaKnown RBP26.97■■□□□ 1.91
SIGMAR1-202ENST00000353468 PLEKHG5O94827 1062 aa26.97■■□□□ 1.91
SIGMAR1-202ENST00000353468 GCP02774 474 aa26.97■■□□□ 1.91
SIGMAR1-202ENST00000353468 SLIT3O75094 1523 aa26.96■■□□□ 1.91
SIGMAR1-202ENST00000353468 LRRC59Q96AG4 307 aaKnown RBP26.96■■□□□ 1.91
SIGMAR1-202ENST00000353468 PNPLA6Q8IY17 1366 aa26.96■■□□□ 1.91
SIGMAR1-202ENST00000353468 MAP3K19Q56UN5 1328 aa26.95■■□□□ 1.91
SIGMAR1-202ENST00000353468 INSRP06213 1382 aa26.94■■□□□ 1.9
SIGMAR1-202ENST00000353468 NFAT5O94916 1531 aa26.93■■□□□ 1.9
SIGMAR1-202ENST00000353468 MED1Q15648 1581 aaPredicted RBP26.93■■□□□ 1.9
SIGMAR1-202ENST00000353468 CDK12Q9NYV4 1490 aaPredicted RBP26.92■■□□□ 1.9
SIGMAR1-202ENST00000353468 AMPHP49418 695 aa26.91■■□□□ 1.9
SIGMAR1-202ENST00000353468 WDR43Q15061 677 aaKnown RBP eCLIP26.91■■□□□ 1.9
SIGMAR1-202ENST00000353468 CABLES1Q8TDN4 633 aa26.91■■□□□ 1.9
SIGMAR1-202ENST00000353468 PHLPP1O60346 1717 aa26.9■■□□□ 1.9
SIGMAR1-202ENST00000353468 COL3A1P02461 1466 aaPredicted RBP26.9■■□□□ 1.9
SIGMAR1-202ENST00000353468 DIAPH1O60610 1272 aaKnown RBP26.89■■□□□ 1.9
SIGMAR1-202ENST00000353468 KIF24Q5T7B8 1368 aa26.88■■□□□ 1.89
SIGMAR1-202ENST00000353468 PEAK1Q9H792 1746 aa26.88■■□□□ 1.89
SIGMAR1-202ENST00000353468 ARHGEF25Q86VW2 580 aa26.88■■□□□ 1.89
SIGMAR1-202ENST00000353468 FLT4P35916 1363 aa26.87■■□□□ 1.89
SIGMAR1-202ENST00000353468 YTHDC1Q96MU7 727 aaKnown RBP26.87■■□□□ 1.89
SIGMAR1-202ENST00000353468 ADAMTS8Q9UP79 889 aa26.87■■□□□ 1.89
SIGMAR1-202ENST00000353468 NUDCQ9Y266 331 aa26.87■■□□□ 1.89
SIGMAR1-202ENST00000353468 PHRF1Q9P1Y6 1649 aaKnown RBP26.87■■□□□ 1.89
SIGMAR1-202ENST00000353468 COL16A1Q07092 1604 aaPredicted RBP26.86■■□□□ 1.89
SIGMAR1-202ENST00000353468 HSP90AB2PQ58FF8 381 aa26.86■■□□□ 1.89
SIGMAR1-202ENST00000353468 CRYBG1Q9Y4K1 1723 aa26.86■■□□□ 1.89
SIGMAR1-202ENST00000353468 SHPRHQ149N8 1683 aa26.85■■□□□ 1.89
SIGMAR1-202ENST00000353468 LTN1O94822 1766 aa26.85■■□□□ 1.89
SIGMAR1-202ENST00000353468 HOXC9P31274 260 aa26.84■■□□□ 1.89
SIGMAR1-202ENST00000353468 ZC3H6P61129 1189 aaKnown RBP26.84■■□□□ 1.89
SIGMAR1-202ENST00000353468 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
SIGMAR1-202ENST00000353468 RTL1A6NKG5 1358 aa26.84■■□□□ 1.89
SIGMAR1-202ENST00000353468 IP6K1Q92551 441 aa26.84■■□□□ 1.89
SIGMAR1-202ENST00000353468 IL13P35225 146 aa26.83■■□□□ 1.89
SIGMAR1-202ENST00000353468 HAP1P54257 671 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms