RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 TNPO1Q92973 898 aaKnown RBP6□□□□□ -1.45
SKP1-202ENST00000353411 MPHOSPH9Q99550 1183 aa6□□□□□ -1.45
SKP1-202ENST00000353411 BRMS1Q9HCU9 246 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 POTEB2H3BUK9 544 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 NPHP1O15259 732 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 TUBB4AP04350 444 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 SRPK2P78362 688 aaKnown RBP5.99□□□□□ -1.45
SKP1-202ENST00000353411 PPM1EQ8WY54 764 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 USP47Q96K76 1375 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 CCDC88BA6NC98 1476 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 LRCH2Q5VUJ6 765 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 WDR33Q9C0J8 1336 aaKnown RBP5.99□□□□□ -1.45
SKP1-202ENST00000353411 H3BQV1 296 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 IFFO2Q5TF58 517 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 BICD2Q8TD16 824 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 HOOK1Q9UJC3 728 aaKnown RBP5.99□□□□□ -1.45
SKP1-202ENST00000353411 ZNF500O60304 480 aaPredicted RBP5.99□□□□□ -1.45
SKP1-202ENST00000353411 SF3A1Q15459 793 aaKnown RBP5.99□□□□□ -1.45
SKP1-202ENST00000353411 LRRCC1Q9C099 1032 aa5.99□□□□□ -1.45
SKP1-202ENST00000353411 TMCO5BA8MYB1 307 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 SMC2O95347 1197 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 MAP9Q49MG5 647 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 TOMM22Q9NS69 142 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 POGZQ7Z3K3 1410 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 RRBP1Q9P2E9 1410 aaKnown RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 A0A1B0GUA9 196 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 GBP6Q6ZN66 633 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 DZIP1LQ8IYY4 767 aaKnown RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 CAGE1Q8TC20 777 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 SMC3Q9UQE7 1217 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 CCDC171Q6TFL3 1326 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 LMAN1P49257 510 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 FOXD4L6Q3SYB3 417 aaPredicted RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 LRSAM1Q6UWE0 723 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 FOXD4L3Q6VB84 417 aaPredicted RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 GPATCH3Q96I76 525 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 PUS7Q96PZ0 661 aaKnown RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 UACAQ9BZF9 1416 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 POLR3GO15318 223 aaPredicted RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 GORABQ5T7V8 394 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 C10orf67Q8IYJ2 551 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 CCDC102AQ96A19 550 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 MAP2K2P36507 400 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 NOL8Q76FK4 1167 aaKnown RBP5.98□□□□□ -1.45
SKP1-202ENST00000353411 FMNL3Q8IVF7 1028 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 CCDC183Q5T5S1 534 aa5.98□□□□□ -1.45
SKP1-202ENST00000353411 ATP6V1AP38606 617 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 JAKMIP3Q5VZ66 844 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 LMOD2Q6P5Q4 547 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 CCDC73Q6ZRK6 1079 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 MPHOSPH10O00566 681 aaKnown RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 EZRP15311 586 aaKnown RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 PNISRQ8TF01 805 aaKnown RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 SMTNL1A8MU46 457 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 ZSCAN23Q3MJ62 389 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 IQCEQ6IPM2 695 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 DHX29Q7Z478 1369 aaKnown RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 PDCP20941 246 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 MORC1Q86VD1 984 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 ZFP91Q96JP5 570 aaPredicted RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 CENPHQ9H3R5 247 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 RSPH14Q9UHP6 348 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 ZNF428Q96B54 188 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 LRRFIP2Q9Y608 721 aaKnown RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 ROCK1Q13464 1354 aa5.97□□□□□ -1.45
SKP1-202ENST00000353411 C16orf45Q96MC5 204 aaPredicted RBP5.97□□□□□ -1.45
SKP1-202ENST00000353411 GOLGA6L10A0A0M3HER8 536 aa5.96□□□□□ -1.45
SKP1-202ENST00000353411 CAVIN2O95810 425 aa5.96□□□□□ -1.45
SKP1-202ENST00000353411 CHGAP10645 457 aaKnown RBP5.96□□□□□ -1.45
SKP1-202ENST00000353411 CEP135Q66GS9 1140 aa5.96□□□□□ -1.45
SKP1-202ENST00000353411 PDZRN3Q9UPQ7 1066 aa5.96□□□□□ -1.45
SKP1-202ENST00000353411 ECM2O94769 699 aaPredicted RBP5.96□□□□□ -1.45
SKP1-202ENST00000353411 TUBB4BP68371 445 aa5.96□□□□□ -1.45
SKP1-202ENST00000353411 CARMIL1Q5VZK9 1371 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 PLEKHH1Q9ULM0 1364 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 GAPVD1Q14C86 1478 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 RTF1Q92541 710 aaKnown RBP5.96□□□□□ -1.46
SKP1-202ENST00000353411 STAC3Q96MF2 364 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 ADCY5O95622 1261 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 KIF1CO43896 1103 aaKnown RBP5.96□□□□□ -1.46
SKP1-202ENST00000353411 CNPY4Q8N129 248 aa5.96□□□□□ -1.46
SKP1-202ENST00000353411 SRRTQ9BXP5 876 aaKnown RBP5.96□□□□□ -1.46
SKP1-202ENST00000353411 GBP2P32456 591 aaPredicted RBP5.96□□□□□ -1.46
SKP1-202ENST00000353411 ZSCAN12O43309 604 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 SUDS3Q9H7L9 328 aaPredicted RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 GSDMDP57764 484 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 CRACR2AQ9BSW2 395 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 TMX4Q9H1E5 349 aaPredicted RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 ARFGAP3Q9NP61 516 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 RGL3Q3MIN7 710 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 KRBA2Q6ZNG9 492 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 ERC1Q8IUD2 1116 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 CCDC146Q8IYE0 955 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 TNMDQ9H2S6 317 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 RAPGEF2Q9Y4G8 1499 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 VGFO15240 615 aaPredicted RBP5.95□□□□□ -1.46
SKP1-202ENST00000353411 MIA2Q96PC5 1412 aa5.95□□□□□ -1.46
SKP1-202ENST00000353411 PIBF1Q8WXW3 757 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms