RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ITSN1Q15811 1721 aa18.04■□□□□ 0.48
CDC42-202ENST00000344548 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
CDC42-202ENST00000344548 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
CDC42-202ENST00000344548 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
CDC42-202ENST00000344548 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
CDC42-202ENST00000344548 NALCNQ8IZF0 1738 aa18.02■□□□□ 0.48
CDC42-202ENST00000344548 TTC21BQ7Z4L5 1316 aa18.02■□□□□ 0.47
CDC42-202ENST00000344548 NEFLP07196 543 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 USP6P35125 1406 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
CDC42-202ENST00000344548 NRKQ7Z2Y5 1582 aa18.01■□□□□ 0.47
CDC42-202ENST00000344548 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
CDC42-202ENST00000344548 SSH2Q76I76 1423 aa18■□□□□ 0.47
CDC42-202ENST00000344548 PNPLA6Q8IY17 1366 aa18■□□□□ 0.47
CDC42-202ENST00000344548 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
CDC42-202ENST00000344548 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
CDC42-202ENST00000344548 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
CDC42-202ENST00000344548 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
CDC42-202ENST00000344548 PDE3BQ13370 1112 aa17.99■□□□□ 0.47
CDC42-202ENST00000344548 RRS1Q15050 365 aaKnown RBP17.99■□□□□ 0.47
CDC42-202ENST00000344548 COG3Q96JB2 828 aa17.98■□□□□ 0.47
CDC42-202ENST00000344548 FMN2Q9NZ56 1722 aa17.98■□□□□ 0.47
CDC42-202ENST00000344548 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
CDC42-202ENST00000344548 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
CDC42-202ENST00000344548 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
CDC42-202ENST00000344548 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
CDC42-202ENST00000344548 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.47
CDC42-202ENST00000344548 RUNDC1Q96C34 613 aa17.96■□□□□ 0.47
CDC42-202ENST00000344548 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
CDC42-202ENST00000344548 IQSEC2Q5JU85 1478 aa17.94■□□□□ 0.46
CDC42-202ENST00000344548 OVOS2A0A0J9YW53 1432 aa17.94■□□□□ 0.46
CDC42-202ENST00000344548 OVOS2Q6IE36 1432 aa17.94■□□□□ 0.46
CDC42-202ENST00000344548 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
CDC42-202ENST00000344548 DIAPH1O60610 1272 aaKnown RBP17.94■□□□□ 0.46
CDC42-202ENST00000344548 ADGRL3Q9HAR2 1447 aa17.94■□□□□ 0.46
CDC42-202ENST00000344548 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
CDC42-202ENST00000344548 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
CDC42-202ENST00000344548 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
CDC42-202ENST00000344548 SOX12O15370 315 aa17.93■□□□□ 0.46
CDC42-202ENST00000344548 SLFN5Q08AF3 891 aa17.92■□□□□ 0.46
CDC42-202ENST00000344548 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
CDC42-202ENST00000344548 RCAN3Q9UKA8 241 aa17.92■□□□□ 0.46
CDC42-202ENST00000344548 NWD1Q149M9 1564 aa17.92■□□□□ 0.46
CDC42-202ENST00000344548 C14orf37Q86TY3 774 aa17.91■□□□□ 0.46
CDC42-202ENST00000344548 NUTM2GQ5VZR2 741 aa17.91■□□□□ 0.46
CDC42-202ENST00000344548 PROSER2Q86WR7 435 aaPredicted RBP17.91■□□□□ 0.46
CDC42-202ENST00000344548 STRCP1A6NGW2 1772 aa17.9■□□□□ 0.46
CDC42-202ENST00000344548 TRMT2AQ8IZ69 625 aaKnown RBP17.9■□□□□ 0.46
CDC42-202ENST00000344548 ORAI2Q96SN7 254 aa17.89■□□□□ 0.46
CDC42-202ENST00000344548 PHF23Q9BUL5 403 aaPredicted RBP17.89■□□□□ 0.46
CDC42-202ENST00000344548 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.46
CDC42-202ENST00000344548 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.45
CDC42-202ENST00000344548 IL13P35225 146 aa17.89■□□□□ 0.45
CDC42-202ENST00000344548 ESCO1Q5FWF5 840 aa17.89■□□□□ 0.45
CDC42-202ENST00000344548 PIK3C2AO00443 1686 aa17.88■□□□□ 0.45
CDC42-202ENST00000344548 HMOX1P09601 288 aa17.88■□□□□ 0.45
CDC42-202ENST00000344548 TTC21AQ8NDW8 1320 aa17.87■□□□□ 0.45
CDC42-202ENST00000344548 USP31Q70CQ4 1352 aa17.87■□□□□ 0.45
CDC42-202ENST00000344548 CDK12Q9NYV4 1490 aaPredicted RBP17.87■□□□□ 0.45
CDC42-202ENST00000344548 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
CDC42-202ENST00000344548 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
CDC42-202ENST00000344548 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
CDC42-202ENST00000344548 PLIN1O60240 522 aa17.85■□□□□ 0.45
CDC42-202ENST00000344548 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
CDC42-202ENST00000344548 RRP1P56182 461 aaKnown RBP17.85■□□□□ 0.45
CDC42-202ENST00000344548 NLRP6P59044 892 aa17.85■□□□□ 0.45
CDC42-202ENST00000344548 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
CDC42-202ENST00000344548 LRRC7Q96NW7 1537 aa17.85■□□□□ 0.45
CDC42-202ENST00000344548 XPCQ01831 940 aaPredicted RBP17.84■□□□□ 0.45
CDC42-202ENST00000344548 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
CDC42-202ENST00000344548 PRKAR2BP31323 418 aa17.84■□□□□ 0.45
CDC42-202ENST00000344548 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
CDC42-202ENST00000344548 MARF1Q9Y4F3 1742 aaKnown RBP17.84■□□□□ 0.45
CDC42-202ENST00000344548 TMEM94Q12767 1356 aa17.84■□□□□ 0.45
CDC42-202ENST00000344548 STRCQ7RTU9 1775 aa17.83■□□□□ 0.45
CDC42-202ENST00000344548 FOXO3O43524 673 aa17.83■□□□□ 0.45
CDC42-202ENST00000344548 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.45
CDC42-202ENST00000344548 EIF4A2Q14240 407 aaKnown RBP17.83■□□□□ 0.44
CDC42-202ENST00000344548 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
CDC42-202ENST00000344548 FCHSD2O94868 740 aa17.82■□□□□ 0.44
CDC42-202ENST00000344548 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
CDC42-202ENST00000344548 E9PSI1 815 aa17.82■□□□□ 0.44
CDC42-202ENST00000344548 C19orf44Q9H6X5 657 aa17.82■□□□□ 0.44
CDC42-202ENST00000344548 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
CDC42-202ENST00000344548 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
CDC42-202ENST00000344548 PSME1Q06323 249 aa17.8■□□□□ 0.44
CDC42-202ENST00000344548 MAPK8IP3Q9UPT6 1336 aa17.79■□□□□ 0.44
CDC42-202ENST00000344548 B4GALNT3Q6L9W6 998 aa17.79■□□□□ 0.44
CDC42-202ENST00000344548 RIPK4P57078 832 aa17.78■□□□□ 0.44
CDC42-202ENST00000344548 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
CDC42-202ENST00000344548 WDR63Q8IWG1 891 aa17.78■□□□□ 0.44
CDC42-202ENST00000344548 DDX17Q92841 729 aaKnown RBP17.78■□□□□ 0.44
CDC42-202ENST00000344548 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
CDC42-202ENST00000344548 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.44
CDC42-202ENST00000344548 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
CDC42-202ENST00000344548 PLEKHG5O94827 1062 aa17.77■□□□□ 0.43
CDC42-202ENST00000344548 BCAR3O75815 825 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms