RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
CCDC144A-202ENST00000340621 ROBO2Q9HCK4 1378 aa20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 SKAP1Q86WV1 359 aa20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 RARSP54136 660 aaKnown RBP20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 ANP32EQ9BTT0 268 aa20.65■□□□□ 0.9
CCDC144A-202ENST00000340621 ANKRD26Q9UPS8 1709 aa20.64■□□□□ 0.9
CCDC144A-202ENST00000340621 NME9Q86XW9 330 aa20.64■□□□□ 0.89
CCDC144A-202ENST00000340621 ZRANB1Q9UGI0 708 aa20.63■□□□□ 0.89
CCDC144A-202ENST00000340621 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
CCDC144A-202ENST00000340621 TRIM35Q9UPQ4 493 aa20.63■□□□□ 0.89
CCDC144A-202ENST00000340621 PLEKHG1Q9ULL1 1385 aa20.63■□□□□ 0.89
CCDC144A-202ENST00000340621 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
CCDC144A-202ENST00000340621 PDE3AQ14432 1141 aa20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 SLC26A8Q96RN1 970 aa20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 MAPK8IP3Q9UPT6 1336 aa20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 ADGRB2O60241 1585 aa20.62■□□□□ 0.89
CCDC144A-202ENST00000340621 MS4A1P11836 297 aa20.61■□□□□ 0.89
CCDC144A-202ENST00000340621 FRAT1Q92837 279 aaPredicted RBP20.61■□□□□ 0.89
CCDC144A-202ENST00000340621 CPS1P31327 1500 aa20.61■□□□□ 0.89
CCDC144A-202ENST00000340621 CANXP27824 592 aaKnown RBP20.6■□□□□ 0.89
CCDC144A-202ENST00000340621 EID1Q9Y6B2 187 aa20.6■□□□□ 0.89
CCDC144A-202ENST00000340621 PANK1Q8TE04 598 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 KIF20BQ96Q89 1820 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 FCHSD2O94868 740 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 PDE4AP27815 886 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 RIPK4P57078 832 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
CCDC144A-202ENST00000340621 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.89
CCDC144A-202ENST00000340621 TSR2Q969E8 191 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-202ENST00000340621 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
CCDC144A-202ENST00000340621 TRHP20396 242 aaPredicted RBP20.58■□□□□ 0.88
CCDC144A-202ENST00000340621 ZNF692Q9BU19 519 aaPredicted RBP20.58■□□□□ 0.88
CCDC144A-202ENST00000340621 BCL2L13Q9BXK5 485 aa20.57■□□□□ 0.88
CCDC144A-202ENST00000340621 COG6Q9Y2V7 657 aa20.57■□□□□ 0.88
CCDC144A-202ENST00000340621 COG3Q96JB2 828 aa20.57■□□□□ 0.88
CCDC144A-202ENST00000340621 BACH2Q9BYV9 841 aa20.56■□□□□ 0.88
CCDC144A-202ENST00000340621 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
CCDC144A-202ENST00000340621 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
CCDC144A-202ENST00000340621 PTPRUQ92729 1446 aa20.55■□□□□ 0.88
CCDC144A-202ENST00000340621 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
CCDC144A-202ENST00000340621 PRKAR2BP31323 418 aa20.54■□□□□ 0.88
CCDC144A-202ENST00000340621 TNNQ9UQP3 1299 aa20.54■□□□□ 0.88
CCDC144A-202ENST00000340621 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
CCDC144A-202ENST00000340621 IL13P35225 146 aa20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 AATKQ6ZMQ8 1374 aa20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 HMOX1P09601 288 aa20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 RRS1Q15050 365 aaKnown RBP20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 THEMISQ8N1K5 641 aaPredicted RBP20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
CCDC144A-202ENST00000340621 RLBP1P12271 317 aa20.52■□□□□ 0.88
CCDC144A-202ENST00000340621 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
CCDC144A-202ENST00000340621 IL16Q14005 1332 aa20.52■□□□□ 0.88
CCDC144A-202ENST00000340621 IGHDP01880 384 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 ACEP12821 1306 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 C3P01024 1663 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 CLUAP1Q96AJ1 413 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 ARHGAP23Q9P227 1491 aa20.51■□□□□ 0.87
CCDC144A-202ENST00000340621 CT47B1P0C2W7 299 aaPredicted RBP20.5■□□□□ 0.87
CCDC144A-202ENST00000340621 ANP32AP39687 249 aaKnown RBP20.5■□□□□ 0.87
CCDC144A-202ENST00000340621 SLIT1O75093 1534 aa20.5■□□□□ 0.87
CCDC144A-202ENST00000340621 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
CCDC144A-202ENST00000340621 NEFMP07197 916 aa20.48■□□□□ 0.87
CCDC144A-202ENST00000340621 LRRC7Q96NW7 1537 aa20.48■□□□□ 0.87
CCDC144A-202ENST00000340621 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
CCDC144A-202ENST00000340621 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
CCDC144A-202ENST00000340621 ERICH6Q7L0X2 663 aa20.46■□□□□ 0.87
CCDC144A-202ENST00000340621 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
CCDC144A-202ENST00000340621 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
CCDC144A-202ENST00000340621 MON2Q7Z3U7 1717 aa20.46■□□□□ 0.87
CCDC144A-202ENST00000340621 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
CCDC144A-202ENST00000340621 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
CCDC144A-202ENST00000340621 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
CCDC144A-202ENST00000340621 NPM2Q86SE8 214 aaKnown RBP20.44■□□□□ 0.86
CCDC144A-202ENST00000340621 FER1L4A9Z1Z3 1794 aa20.43■□□□□ 0.86
CCDC144A-202ENST00000340621 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
CCDC144A-202ENST00000340621 RGS3P49796 1198 aa20.43■□□□□ 0.86
CCDC144A-202ENST00000340621 AAMPQ13685 434 aa20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 THUMPD2Q9BTF0 503 aaKnown RBP20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 NOP58Q9Y2X3 529 aaKnown RBP20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 PAK3O75914 559 aaPredicted RBP20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 LAS1LQ9Y4W2 734 aaKnown RBP20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 USP6P35125 1406 aa20.42■□□□□ 0.86
CCDC144A-202ENST00000340621 DZIP1LQ8IYY4 767 aaKnown RBP20.41■□□□□ 0.86
CCDC144A-202ENST00000340621 ITSN1Q15811 1721 aa20.41■□□□□ 0.86
CCDC144A-202ENST00000340621 MVPQ14764 893 aaKnown RBP20.41■□□□□ 0.86
CCDC144A-202ENST00000340621 PTCH1Q13635 1447 aa20.4■□□□□ 0.86
CCDC144A-202ENST00000340621 TRIM27P14373 513 aa20.39■□□□□ 0.86
CCDC144A-202ENST00000340621 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.86
CCDC144A-202ENST00000340621 NOB1Q9ULX3 412 aaKnown RBP20.39■□□□□ 0.86
CCDC144A-202ENST00000340621 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms