RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
CDK5RAP3-201ENST00000338399 LRRC7Q96NW7 1537 aa19.84■□□□□ 0.77
CDK5RAP3-201ENST00000338399 CENPBP07199 599 aaPredicted RBP19.84■□□□□ 0.77
CDK5RAP3-201ENST00000338399 ATF3P18847 181 aa19.84■□□□□ 0.77
CDK5RAP3-201ENST00000338399 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
CDK5RAP3-201ENST00000338399 SSH2Q76I76 1423 aa19.82■□□□□ 0.76
CDK5RAP3-201ENST00000338399 DCCP43146 1447 aa19.82■□□□□ 0.76
CDK5RAP3-201ENST00000338399 ORAI2Q96SN7 254 aa19.82■□□□□ 0.76
CDK5RAP3-201ENST00000338399 MSH6P52701 1360 aa19.81■□□□□ 0.76
CDK5RAP3-201ENST00000338399 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
CDK5RAP3-201ENST00000338399 MTHFSP49914 203 aa19.8■□□□□ 0.76
CDK5RAP3-201ENST00000338399 HNRNPUQ00839 825 aaKnown RBP eCLIP19.8■□□□□ 0.76
CDK5RAP3-201ENST00000338399 COG3Q96JB2 828 aa19.8■□□□□ 0.76
CDK5RAP3-201ENST00000338399 CADPS2Q86UW7 1296 aa19.79■□□□□ 0.76
CDK5RAP3-201ENST00000338399 TTC21AQ8NDW8 1320 aa19.79■□□□□ 0.76
CDK5RAP3-201ENST00000338399 MST1RQ04912 1400 aa19.79■□□□□ 0.76
CDK5RAP3-201ENST00000338399 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-201ENST00000338399 FBLN1P23142 703 aa19.76■□□□□ 0.75
CDK5RAP3-201ENST00000338399 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 PSME1Q06323 249 aa19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 WDR43Q15061 677 aaKnown RBP eCLIP19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 PAK3O75914 559 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 PIK3C2AO00443 1686 aa19.75■□□□□ 0.75
CDK5RAP3-201ENST00000338399 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
CDK5RAP3-201ENST00000338399 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
CDK5RAP3-201ENST00000338399 FOXO3O43524 673 aa19.74■□□□□ 0.75
CDK5RAP3-201ENST00000338399 CFAP53Q96M91 514 aa19.74■□□□□ 0.75
CDK5RAP3-201ENST00000338399 ADAMTS8Q9UP79 889 aa19.73■□□□□ 0.75
CDK5RAP3-201ENST00000338399 POLKQ9UBT6 870 aa19.72■□□□□ 0.75
CDK5RAP3-201ENST00000338399 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CDK5RAP3-201ENST00000338399 AATKQ6ZMQ8 1374 aa19.71■□□□□ 0.75
CDK5RAP3-201ENST00000338399 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
CDK5RAP3-201ENST00000338399 XPCQ01831 940 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-201ENST00000338399 ABTB2Q8N961 1025 aa19.71■□□□□ 0.75
CDK5RAP3-201ENST00000338399 NLRP6P59044 892 aa19.7■□□□□ 0.74
CDK5RAP3-201ENST00000338399 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
CDK5RAP3-201ENST00000338399 SENP3-EIF4A1A0A087X0R7 540 aa19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 EMILIN1Q9Y6C2 1016 aa19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 MARF1Q9Y4F3 1742 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 RRS1Q15050 365 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 KRT28Q7Z3Y7 464 aa19.69■□□□□ 0.74
CDK5RAP3-201ENST00000338399 INSRP06213 1382 aa19.68■□□□□ 0.74
CDK5RAP3-201ENST00000338399 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-201ENST00000338399 USP54Q70EL1 1684 aa19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 SOX12O15370 315 aa19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 COL3A1P02461 1466 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 TRPM3Q9HCF6 1732 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 PNPLA6Q8IY17 1366 aa19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 SLAIN2Q9P270 581 aa19.67■□□□□ 0.74
CDK5RAP3-201ENST00000338399 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
CDK5RAP3-201ENST00000338399 DDX17Q92841 729 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-201ENST00000338399 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-201ENST00000338399 ZBED9Q6R2W3 1325 aa19.66■□□□□ 0.74
CDK5RAP3-201ENST00000338399 BRINP3Q76B58 766 aa19.64■□□□□ 0.73
CDK5RAP3-201ENST00000338399 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-201ENST00000338399 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-201ENST00000338399 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
CDK5RAP3-201ENST00000338399 NUDCQ9Y266 331 aa19.62■□□□□ 0.73
CDK5RAP3-201ENST00000338399 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
CDK5RAP3-201ENST00000338399 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
CDK5RAP3-201ENST00000338399 U2SURPO15042 1029 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-201ENST00000338399 U2AF1L5P0DN76 240 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-201ENST00000338399 U2AF1Q01081 240 aaKnown RBP eCLIP19.6■□□□□ 0.736e-9■■■□□ 17
CDK5RAP3-201ENST00000338399 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
CDK5RAP3-201ENST00000338399 PEAK1Q9H792 1746 aa19.6■□□□□ 0.73
CDK5RAP3-201ENST00000338399 ALS2Q96Q42 1657 aa19.6■□□□□ 0.73
CDK5RAP3-201ENST00000338399 MAP3K19Q56UN5 1328 aa19.59■□□□□ 0.73
CDK5RAP3-201ENST00000338399 PXDNQ92626 1479 aa19.58■□□□□ 0.72
CDK5RAP3-201ENST00000338399 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
CDK5RAP3-201ENST00000338399 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
CDK5RAP3-201ENST00000338399 IL13P35225 146 aa19.56■□□□□ 0.72
CDK5RAP3-201ENST00000338399 AMPHP49418 695 aa19.56■□□□□ 0.72
CDK5RAP3-201ENST00000338399 HSP90AB2PQ58FF8 381 aa19.55■□□□□ 0.72
CDK5RAP3-201ENST00000338399 LTN1O94822 1766 aa19.55■□□□□ 0.72
CDK5RAP3-201ENST00000338399 NFAT5O94916 1531 aa19.55■□□□□ 0.72
CDK5RAP3-201ENST00000338399 APAF1O14727 1248 aa19.54■□□□□ 0.72
CDK5RAP3-201ENST00000338399 KCNH5Q8NCM2 988 aa19.54■□□□□ 0.72
CDK5RAP3-201ENST00000338399 RUNDC1Q96C34 613 aa19.54■□□□□ 0.72
CDK5RAP3-201ENST00000338399 SLIT3O75094 1523 aa19.54■□□□□ 0.72
CDK5RAP3-201ENST00000338399 TNS3Q68CZ2 1445 aa19.54■□□□□ 0.72
CDK5RAP3-201ENST00000338399 FLT4P35916 1363 aa19.53■□□□□ 0.72
CDK5RAP3-201ENST00000338399 GCP02774 474 aa19.53■□□□□ 0.72
CDK5RAP3-201ENST00000338399 USP19O94966 1318 aa19.53■□□□□ 0.72
CDK5RAP3-201ENST00000338399 SPATA31A3Q5VYP0 1347 aa19.53■□□□□ 0.72
CDK5RAP3-201ENST00000338399 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
CDK5RAP3-201ENST00000338399 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-201ENST00000338399 NHSL1Q5SYE7 1610 aa19.51■□□□□ 0.71
CDK5RAP3-201ENST00000338399 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-201ENST00000338399 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
CDK5RAP3-201ENST00000338399 HOXC9P31274 260 aa19.5■□□□□ 0.71
CDK5RAP3-201ENST00000338399 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
CDK5RAP3-201ENST00000338399 FCHSD2O94868 740 aa19.49■□□□□ 0.71
CDK5RAP3-201ENST00000338399 HMOX1P09601 288 aa19.49■□□□□ 0.71
CDK5RAP3-201ENST00000338399 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
CDK5RAP3-201ENST00000338399 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
CDK5RAP3-201ENST00000338399 ROBO1Q9Y6N7 1651 aa19.49■□□□□ 0.71
CDK5RAP3-201ENST00000338399 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms