RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 CCDC61Q9Y6R9 512 aa17.54■□□□□ 0.4
PRIM1-201ENST00000338193 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
PRIM1-201ENST00000338193 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
PRIM1-201ENST00000338193 PXDNQ92626 1479 aa17.54■□□□□ 0.4
PRIM1-201ENST00000338193 COL16A1Q07092 1604 aaPredicted RBP17.53■□□□□ 0.4
PRIM1-201ENST00000338193 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
PRIM1-201ENST00000338193 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
PRIM1-201ENST00000338193 TRPM3Q9HCF6 1732 aaPredicted RBP17.53■□□□□ 0.4
PRIM1-201ENST00000338193 ACEP12821 1306 aa17.52■□□□□ 0.4
PRIM1-201ENST00000338193 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.39
PRIM1-201ENST00000338193 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.39
PRIM1-201ENST00000338193 TMC1Q8TDI8 760 aa17.52■□□□□ 0.39
PRIM1-201ENST00000338193 FBXO41Q8TF61 875 aa17.52■□□□□ 0.39
PRIM1-201ENST00000338193 POLR3AO14802 1390 aaPredicted RBP17.51■□□□□ 0.39
PRIM1-201ENST00000338193 NRKQ7Z2Y5 1582 aa17.51■□□□□ 0.39
PRIM1-201ENST00000338193 A0A1W2PP64 1363 aa17.5■□□□□ 0.39
PRIM1-201ENST00000338193 HAX1O00165 279 aa17.5■□□□□ 0.39
PRIM1-201ENST00000338193 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
PRIM1-201ENST00000338193 HSPA1LP34931 641 aa17.5■□□□□ 0.39
PRIM1-201ENST00000338193 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
PRIM1-201ENST00000338193 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
PRIM1-201ENST00000338193 FXR2P51116 673 aaKnown RBP eCLIP17.48■□□□□ 0.39
PRIM1-201ENST00000338193 NGDNQ8NEJ9 315 aaKnown RBP17.48■□□□□ 0.39
PRIM1-201ENST00000338193 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
PRIM1-201ENST00000338193 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
PRIM1-201ENST00000338193 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
PRIM1-201ENST00000338193 USP6P35125 1406 aa17.46■□□□□ 0.39
PRIM1-201ENST00000338193 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
PRIM1-201ENST00000338193 SLC24A1O60721 1099 aa17.46■□□□□ 0.39
PRIM1-201ENST00000338193 CARD14Q9BXL6 1004 aa17.46■□□□□ 0.39
PRIM1-201ENST00000338193 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
PRIM1-201ENST00000338193 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
PRIM1-201ENST00000338193 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
PRIM1-201ENST00000338193 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
PRIM1-201ENST00000338193 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
PRIM1-201ENST00000338193 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
PRIM1-201ENST00000338193 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
PRIM1-201ENST00000338193 PSME1Q06323 249 aa17.43■□□□□ 0.38
PRIM1-201ENST00000338193 ILDR1Q86SU0 546 aaPredicted RBP17.42■□□□□ 0.38
PRIM1-201ENST00000338193 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
PRIM1-201ENST00000338193 NINLQ9Y2I6 1382 aa17.42■□□□□ 0.38
PRIM1-201ENST00000338193 PANK3Q9H999 370 aa17.41■□□□□ 0.38
PRIM1-201ENST00000338193 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
PRIM1-201ENST00000338193 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
PRIM1-201ENST00000338193 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
PRIM1-201ENST00000338193 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
PRIM1-201ENST00000338193 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
PRIM1-201ENST00000338193 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
PRIM1-201ENST00000338193 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
PRIM1-201ENST00000338193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
PRIM1-201ENST00000338193 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
PRIM1-201ENST00000338193 ABCA3Q99758 1704 aa17.39■□□□□ 0.37
PRIM1-201ENST00000338193 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
PRIM1-201ENST00000338193 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
PRIM1-201ENST00000338193 TERF2IPQ9NYB0 399 aa17.39■□□□□ 0.37
PRIM1-201ENST00000338193 SBNO1A3KN83 1393 aa17.39■□□□□ 0.37
PRIM1-201ENST00000338193 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
PRIM1-201ENST00000338193 MED1Q15648 1581 aaPredicted RBP17.39■□□□□ 0.37
PRIM1-201ENST00000338193 SHPRHQ149N8 1683 aa17.38■□□□□ 0.37
PRIM1-201ENST00000338193 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
PRIM1-201ENST00000338193 NME9Q86XW9 330 aa17.38■□□□□ 0.37
PRIM1-201ENST00000338193 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
PRIM1-201ENST00000338193 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
PRIM1-201ENST00000338193 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
PRIM1-201ENST00000338193 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
PRIM1-201ENST00000338193 LMOD2Q6P5Q4 547 aa17.36■□□□□ 0.37
PRIM1-201ENST00000338193 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
PRIM1-201ENST00000338193 DDX10Q13206 875 aaKnown RBP17.35■□□□□ 0.37
PRIM1-201ENST00000338193 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
PRIM1-201ENST00000338193 PER1O15534 1290 aaPredicted RBP17.34■□□□□ 0.37
PRIM1-201ENST00000338193 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
PRIM1-201ENST00000338193 LRP6O75581 1613 aa17.33■□□□□ 0.36
PRIM1-201ENST00000338193 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
PRIM1-201ENST00000338193 JCADQ9P266 1359 aa17.32■□□□□ 0.36
PRIM1-201ENST00000338193 OVOS2A0A0J9YW53 1432 aa17.32■□□□□ 0.36
PRIM1-201ENST00000338193 OVOS2Q6IE36 1432 aa17.32■□□□□ 0.36
PRIM1-201ENST00000338193 FYB1O15117 783 aa17.31■□□□□ 0.36
PRIM1-201ENST00000338193 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
PRIM1-201ENST00000338193 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
PRIM1-201ENST00000338193 ANKRD26Q9UPS8 1709 aa17.31■□□□□ 0.36
PRIM1-201ENST00000338193 FBLN1P23142 703 aa17.3■□□□□ 0.36
PRIM1-201ENST00000338193 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
PRIM1-201ENST00000338193 SLIT3O75094 1523 aa17.3■□□□□ 0.36
PRIM1-201ENST00000338193 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
PRIM1-201ENST00000338193 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
PRIM1-201ENST00000338193 NLRP6P59044 892 aa17.28■□□□□ 0.36
PRIM1-201ENST00000338193 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
PRIM1-201ENST00000338193 USP19O94966 1318 aa17.28■□□□□ 0.36
PRIM1-201ENST00000338193 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
PRIM1-201ENST00000338193 NUTM2BA6NNL0 878 aaPredicted RBP17.28■□□□□ 0.36
PRIM1-201ENST00000338193 NUTM2EB1AL46 878 aaPredicted RBP17.28■□□□□ 0.36
PRIM1-201ENST00000338193 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
PRIM1-201ENST00000338193 NFAT5O94916 1531 aa17.27■□□□□ 0.36
PRIM1-201ENST00000338193 SOX12O15370 315 aa17.27■□□□□ 0.35
PRIM1-201ENST00000338193 EVX2Q03828 476 aa17.26■□□□□ 0.35
PRIM1-201ENST00000338193 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
PRIM1-201ENST00000338193 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
PRIM1-201ENST00000338193 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
PRIM1-201ENST00000338193 NLRP13Q86W25 1043 aa17.24■□□□□ 0.35
PRIM1-201ENST00000338193 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms