RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
NPLOC4-201ENST00000331134 SMARCA5O60264 1052 aaPredicted RBP22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 ZMYND15Q9H091 742 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 EID1Q9Y6B2 187 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 GNAI3P08754 354 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 TMPOP42166 694 aaKnown RBP22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 SULT6B1Q6IMI4 303 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 GDPD2Q9HCC8 539 aa22.68■■□□□ 1.22
NPLOC4-201ENST00000331134 SYNE3Q6ZMZ3 975 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 TPM1P09493 284 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 FERMT3Q86UX7 667 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 SMC2O95347 1197 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 CABP1Q9NZU7 370 aa22.67■■□□□ 1.22
NPLOC4-201ENST00000331134 ATP2B1P20020 1258 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 SKIDA1Q1XH10 827 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 CBX1P83916 185 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 FILIP1Q7Z7B0 1213 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 ARGLU1Q9NWB6 273 aaPredicted RBP22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 DAPK1P53355 1430 aa22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 AKAP17AQ02040 695 aaKnown RBP22.66■■□□□ 1.22
NPLOC4-201ENST00000331134 GNAI2P04899 355 aa22.65■■□□□ 1.22
NPLOC4-201ENST00000331134 TRIM29Q14134 588 aa22.65■■□□□ 1.22
NPLOC4-201ENST00000331134 WDR33Q9C0J8 1336 aaKnown RBP22.65■■□□□ 1.22
NPLOC4-201ENST00000331134 KINO60870 393 aaKnown RBP22.65■■□□□ 1.22
NPLOC4-201ENST00000331134 HSP90AB4PQ58FF6 505 aa22.65■■□□□ 1.22
NPLOC4-201ENST00000331134 TBC1D32Q96NH3 1257 aa22.64■■□□□ 1.22
NPLOC4-201ENST00000331134 PCDHB15Q9Y5E8 787 aa22.64■■□□□ 1.21
NPLOC4-201ENST00000331134 CCDC192P0DO97 292 aa22.64■■□□□ 1.21
NPLOC4-201ENST00000331134 C8orf34Q49A92 452 aa22.64■■□□□ 1.21
NPLOC4-201ENST00000331134 CCDC112Q8NEF3 446 aa22.64■■□□□ 1.21
NPLOC4-201ENST00000331134 PCMTD1Q96MG8 357 aaPredicted RBP22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 LRPPRCP42704 1394 aaKnown RBP22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 FAM177A1Q8N128 213 aaPredicted RBP22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 DCTN1Q14203 1278 aa22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 STK11IPQ8N1F8 1099 aa22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 LARP6Q9BRS8 491 aaKnown RBP22.63■■□□□ 1.21
NPLOC4-201ENST00000331134 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
NPLOC4-201ENST00000331134 NINLQ9Y2I6 1382 aa22.62■■□□□ 1.21
NPLOC4-201ENST00000331134 TRIM27P14373 513 aa22.62■■□□□ 1.21
NPLOC4-201ENST00000331134 TNMDQ9H2S6 317 aa22.62■■□□□ 1.21
NPLOC4-201ENST00000331134 SEC24BO95487 1268 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 TRDNQ13061 729 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 LARP1BQ659C4 914 aaKnown RBP22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 LRRCC1Q9C099 1032 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 RBM27Q9P2N5 1060 aaKnown RBP22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 WASHC4Q2M389 1173 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 NFXL1Q6ZNB6 911 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 UBE2Q2Q8WVN8 375 aa22.61■■□□□ 1.21
NPLOC4-201ENST00000331134 LETM1O95202 739 aaPredicted RBP22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 USP25Q9UHP3 1055 aa22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 MAPKBP1O60336 1514 aa22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 IPO7O95373 1038 aaKnown RBP22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 MIS18AQ9NYP9 233 aa22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 PDCP20941 246 aa22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 ZHX1Q9UKY1 873 aaPredicted RBP22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 RIC3Q7Z5B4 369 aa22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 DNAJC2Q99543 621 aaKnown RBP22.6■■□□□ 1.21
NPLOC4-201ENST00000331134 RRS1Q15050 365 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 CAMK4Q16566 473 aa22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 CWC27Q6UX04 472 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 DDX58O95786 925 aaKnown RBP22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 NLRP6P59044 892 aa22.59■■□□□ 1.21
NPLOC4-201ENST00000331134 MARCH6O60337 910 aa22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 CT47B1P0C2W7 299 aaPredicted RBP22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 TRHP20396 242 aaPredicted RBP22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 PSMA5P28066 241 aa22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 TTC5Q8N0Z6 440 aa22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.21
NPLOC4-201ENST00000331134 SIL1Q9H173 461 aa22.58■■□□□ 1.2
NPLOC4-201ENST00000331134 ERICH4A6NGS2 130 aa22.58■■□□□ 1.2
NPLOC4-201ENST00000331134 RALYLQ86SE5 291 aaKnown RBP22.58■■□□□ 1.2
NPLOC4-201ENST00000331134 CYP46A1Q9Y6A2 500 aa22.58■■□□□ 1.2
NPLOC4-201ENST00000331134 NKTRP30414 1462 aaKnown RBP22.58■■□□□ 1.2
NPLOC4-201ENST00000331134 KRT85P78386 507 aa22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 CHMP4CQ96CF2 233 aa22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 NAT10Q9H0A0 1025 aaKnown RBP22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 PODXL2Q9NZ53 605 aa22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 HSP90B2PQ58FF3 399 aa22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 CCDC30Q5VVM6 783 aa22.57■■□□□ 1.2
NPLOC4-201ENST00000331134 CDK13Q14004 1512 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 HDGFL1Q5TGJ6 251 aa22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 NSD3Q9BZ95 1437 aa22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 BAG4O95429 457 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 GTF2E1P29083 439 aaPredicted RBP22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 RBM42Q9BTD8 480 aaKnown RBP22.56■■□□□ 1.2
NPLOC4-201ENST00000331134 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
NPLOC4-201ENST00000331134 JAKMIP1Q96N16 626 aaKnown RBP22.55■■□□□ 1.2
NPLOC4-201ENST00000331134 PDCL3Q9H2J4 239 aa22.55■■□□□ 1.2
NPLOC4-201ENST00000331134 NUTM1Q86Y26 1132 aa22.55■■□□□ 1.2
NPLOC4-201ENST00000331134 ME1P48163 572 aa22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
NPLOC4-201ENST00000331134 CCDC66A2RUB6 948 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms