RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
GINS3-202ENST00000328514 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
GINS3-202ENST00000328514 PUS7Q96PZ0 661 aaKnown RBP14.13□□□□□ -0.15
GINS3-202ENST00000328514 BCL2L13Q9BXK5 485 aa14.13□□□□□ -0.15
GINS3-202ENST00000328514 TERF1P54274 439 aa14.13□□□□□ -0.15
GINS3-202ENST00000328514 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
GINS3-202ENST00000328514 GAS2L3Q86XJ1 694 aa14.13□□□□□ -0.15
GINS3-202ENST00000328514 NOS1P29475 1434 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 TRIM27P14373 513 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 VSIG10Q8N0Z9 540 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 KIF1BO60333 1816 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 IL16Q14005 1332 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 ADGRF5Q8IZF2 1346 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
GINS3-202ENST00000328514 NUCB1Q02818 461 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 ATF7IPQ6VMQ6 1270 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 ZBTB40Q9NUA8 1239 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 SPAG9O60271 1321 aaKnown RBP14.11□□□□□ -0.15
GINS3-202ENST00000328514 BMP2KLQ5H9B9 411 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 PDCL3Q9H2J4 239 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 ABCC11Q96J66 1382 aa14.11□□□□□ -0.15
GINS3-202ENST00000328514 REREQ9P2R6 1566 aa14.1□□□□□ -0.15
GINS3-202ENST00000328514 MTHFSP49914 203 aa14.1□□□□□ -0.15
GINS3-202ENST00000328514 KIF2CQ99661 725 aa14.09□□□□□ -0.15
GINS3-202ENST00000328514 CFAP74Q9C0B2 1584 aa14.09□□□□□ -0.15
GINS3-202ENST00000328514 FANCAO15360 1455 aa14.09□□□□□ -0.15
GINS3-202ENST00000328514 MROH1Q8NDA8 1641 aa14.08□□□□□ -0.15
GINS3-202ENST00000328514 QRICH2Q9H0J4 1663 aa14.08□□□□□ -0.16
GINS3-202ENST00000328514 HS1BP3Q53T59 392 aa14.08□□□□□ -0.16
GINS3-202ENST00000328514 SMC4Q9NTJ3 1288 aa14.08□□□□□ -0.16
GINS3-202ENST00000328514 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 ADGRB3O60242 1522 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 EFCAB6Q5THR3 1501 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 OFD1O75665 1012 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 HSP90AB1P08238 724 aaKnown RBP14.07□□□□□ -0.16
GINS3-202ENST00000328514 BRPF1P55201 1214 aaPredicted RBP14.07□□□□□ -0.16
GINS3-202ENST00000328514 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
GINS3-202ENST00000328514 CD109Q6YHK3 1445 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 SLC12A5Q9H2X9 1139 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 UHRF1BP1LA0JNW5 1464 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 MED14O60244 1454 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 LMTK2Q8IWU2 1503 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
GINS3-202ENST00000328514 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
GINS3-202ENST00000328514 IPO8O15397 1037 aaKnown RBP14.05□□□□□ -0.16
GINS3-202ENST00000328514 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
GINS3-202ENST00000328514 CHD1LQ86WJ1 897 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 CERKQ8TCT0 537 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 PLEKHF1Q96S99 279 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 GLI2P10070 1586 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 ALDH1L2Q3SY69 923 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 UGGT1Q9NYU2 1555 aa14.05□□□□□ -0.16
GINS3-202ENST00000328514 GOLGA6L22H0YM25 854 aa14.04□□□□□ -0.16
GINS3-202ENST00000328514 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
GINS3-202ENST00000328514 ZNF445P59923 1031 aa14.04□□□□□ -0.16
GINS3-202ENST00000328514 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
GINS3-202ENST00000328514 C14orf93Q9H972 538 aaKnown RBP14.04□□□□□ -0.16
GINS3-202ENST00000328514 TRIM35Q9UPQ4 493 aa14.04□□□□□ -0.16
GINS3-202ENST00000328514 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
GINS3-202ENST00000328514 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
GINS3-202ENST00000328514 ZNF428Q96B54 188 aa14.03□□□□□ -0.16
GINS3-202ENST00000328514 NOB1Q9ULX3 412 aaKnown RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 ZCCHC11Q5TAX3 1644 aaKnown RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 TMPOP42166 694 aaKnown RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 TNNT2P45379 298 aaPredicted RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 KIAA1211Q6ZU35 1233 aa14.03□□□□□ -0.16
GINS3-202ENST00000328514 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
GINS3-202ENST00000328514 GCC1Q96CN9 775 aa14.03□□□□□ -0.16
GINS3-202ENST00000328514 ANP32BQ92688 251 aaKnown RBP14.02□□□□□ -0.16
GINS3-202ENST00000328514 CHMP4BQ9H444 224 aaKnown RBP14.02□□□□□ -0.16
GINS3-202ENST00000328514 PIK3R4Q99570 1358 aa14.02□□□□□ -0.16
GINS3-202ENST00000328514 PPIP5K1Q6PFW1 1433 aa14.02□□□□□ -0.17
GINS3-202ENST00000328514 ASXL2Q76L83 1435 aa14.02□□□□□ -0.17
GINS3-202ENST00000328514 PPLO60437 1756 aa14.01□□□□□ -0.17
GINS3-202ENST00000328514 AFAP1Q8N556 730 aa14.01□□□□□ -0.17
GINS3-202ENST00000328514 MAP7D2Q96T17 732 aa14.01□□□□□ -0.17
GINS3-202ENST00000328514 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
GINS3-202ENST00000328514 BAG4O95429 457 aaKnown RBP14□□□□□ -0.17
GINS3-202ENST00000328514 PDLIM2Q96JY6 352 aa14□□□□□ -0.17
GINS3-202ENST00000328514 LNPKQ9C0E8 428 aa14□□□□□ -0.17
GINS3-202ENST00000328514 ZNF500O60304 480 aaPredicted RBP14□□□□□ -0.17
GINS3-202ENST00000328514 CFAP44Q96MT7 982 aa14□□□□□ -0.17
GINS3-202ENST00000328514 CALD1Q05682 793 aaKnown RBP13.99□□□□□ -0.17
GINS3-202ENST00000328514 TBC1D9Q6ZT07 1266 aa13.99□□□□□ -0.17
GINS3-202ENST00000328514 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
GINS3-202ENST00000328514 MSNP26038 577 aaKnown RBP13.98□□□□□ -0.17
GINS3-202ENST00000328514 SSFA2P28290 1259 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 GAS2L2Q8NHY3 880 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 ARHGAP45Q92619 1136 aa13.98□□□□□ -0.17
GINS3-202ENST00000328514 NOL7Q9UMY1 257 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms