RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
EXOSC3-201ENST00000327304 FYB1O15117 783 aa25.43■■□□□ 1.66
EXOSC3-201ENST00000327304 NME9Q86XW9 330 aa25.42■■□□□ 1.66
EXOSC3-201ENST00000327304 NSD2O96028 1365 aa25.42■■□□□ 1.66
EXOSC3-201ENST00000327304 PSME1Q06323 249 aa25.42■■□□□ 1.66
EXOSC3-201ENST00000327304 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
EXOSC3-201ENST00000327304 XPCQ01831 940 aaPredicted RBP25.41■■□□□ 1.66
EXOSC3-201ENST00000327304 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
EXOSC3-201ENST00000327304 RALBP1Q15311 655 aa25.4■■□□□ 1.66
EXOSC3-201ENST00000327304 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.66
EXOSC3-201ENST00000327304 ZRANB1Q9UGI0 708 aa25.39■■□□□ 1.65
EXOSC3-201ENST00000327304 TTC21AQ8NDW8 1320 aa25.38■■□□□ 1.65
EXOSC3-201ENST00000327304 IQSEC2Q5JU85 1478 aa25.38■■□□□ 1.65
EXOSC3-201ENST00000327304 BRD4O60885 1362 aaPredicted RBP25.38■■□□□ 1.65
EXOSC3-201ENST00000327304 KRT28Q7Z3Y7 464 aa25.37■■□□□ 1.65
EXOSC3-201ENST00000327304 TRPM3Q9HCF6 1732 aaPredicted RBP25.37■■□□□ 1.65
EXOSC3-201ENST00000327304 MORC1Q86VD1 984 aa25.37■■□□□ 1.65
EXOSC3-201ENST00000327304 CERKQ8TCT0 537 aa25.37■■□□□ 1.65
EXOSC3-201ENST00000327304 PIK3C2AO00443 1686 aa25.37■■□□□ 1.65
EXOSC3-201ENST00000327304 PAK3O75914 559 aaPredicted RBP25.36■■□□□ 1.65
EXOSC3-201ENST00000327304 NPHP3Q7Z494 1330 aa25.36■■□□□ 1.65
EXOSC3-201ENST00000327304 PXDNQ92626 1479 aa25.35■■□□□ 1.65
EXOSC3-201ENST00000327304 ROBO1Q9Y6N7 1651 aa25.35■■□□□ 1.65
EXOSC3-201ENST00000327304 MRS2Q9HD23 443 aa25.34■■□□□ 1.65
EXOSC3-201ENST00000327304 CCDC184Q52MB2 194 aa25.33■■□□□ 1.65
EXOSC3-201ENST00000327304 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.65
EXOSC3-201ENST00000327304 OVOS2A0A0J9YW53 1432 aa25.32■■□□□ 1.64
EXOSC3-201ENST00000327304 OVOS2Q6IE36 1432 aa25.32■■□□□ 1.64
EXOSC3-201ENST00000327304 NHSL1Q5SYE7 1610 aa25.32■■□□□ 1.64
EXOSC3-201ENST00000327304 TNNT2P45379 298 aaPredicted RBP25.32■■□□□ 1.64
EXOSC3-201ENST00000327304 TOM1O60784 492 aa25.31■■□□□ 1.64
EXOSC3-201ENST00000327304 SCAF1Q9H7N4 1312 aaKnown RBP25.31■■□□□ 1.64
EXOSC3-201ENST00000327304 PPP2R1AP30153 589 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 COG3Q96JB2 828 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 UBAP1LF5GYI3 381 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 ABTB2Q8N961 1025 aa25.3■■□□□ 1.64
EXOSC3-201ENST00000327304 MARF1Q9Y4F3 1742 aaKnown RBP25.29■■□□□ 1.64
EXOSC3-201ENST00000327304 SBNO1A3KN83 1393 aa25.28■■□□□ 1.64
EXOSC3-201ENST00000327304 USP54Q70EL1 1684 aa25.28■■□□□ 1.64
EXOSC3-201ENST00000327304 ALS2Q96Q42 1657 aa25.28■■□□□ 1.64
EXOSC3-201ENST00000327304 SOS2Q07890 1332 aaPredicted RBP25.27■■□□□ 1.64
EXOSC3-201ENST00000327304 NLRP6P59044 892 aa25.27■■□□□ 1.64
EXOSC3-201ENST00000327304 PIP4K2BP78356 416 aa25.26■■□□□ 1.63
EXOSC3-201ENST00000327304 NLRP13Q86W25 1043 aa25.26■■□□□ 1.63
EXOSC3-201ENST00000327304 TNS3Q68CZ2 1445 aa25.25■■□□□ 1.63
EXOSC3-201ENST00000327304 LMOD2Q6P5Q4 547 aa25.25■■□□□ 1.63
EXOSC3-201ENST00000327304 AHDC1Q5TGY3 1603 aaPredicted RBP25.24■■□□□ 1.63
EXOSC3-201ENST00000327304 FBLN1P23142 703 aa25.23■■□□□ 1.63
EXOSC3-201ENST00000327304 SPATA31A3Q5VYP0 1347 aa25.23■■□□□ 1.63
EXOSC3-201ENST00000327304 GTF3C3Q9Y5Q9 886 aa25.23■■□□□ 1.63
EXOSC3-201ENST00000327304 SOX12O15370 315 aa25.19■■□□□ 1.62
EXOSC3-201ENST00000327304 AATKQ6ZMQ8 1374 aa25.19■■□□□ 1.62
EXOSC3-201ENST00000327304 FAM9BQ8IZU0 186 aa25.19■■□□□ 1.62
EXOSC3-201ENST00000327304 PLEKHG5O94827 1062 aa25.18■■□□□ 1.62
EXOSC3-201ENST00000327304 HNRNPUQ00839 825 aaKnown RBP eCLIP25.18■■□□□ 1.62
EXOSC3-201ENST00000327304 ARHGEF10O15013 1369 aa25.17■■□□□ 1.62
EXOSC3-201ENST00000327304 MTHFSP49914 203 aa25.17■■□□□ 1.62
EXOSC3-201ENST00000327304 USP19O94966 1318 aa25.17■■□□□ 1.62
EXOSC3-201ENST00000327304 SLIT3O75094 1523 aa25.16■■□□□ 1.62
EXOSC3-201ENST00000327304 MED1Q15648 1581 aaPredicted RBP25.16■■□□□ 1.62
EXOSC3-201ENST00000327304 MAP2P11137 1827 aaKnown RBP25.16■■□□□ 1.62
EXOSC3-201ENST00000327304 PHLPP1O60346 1717 aa25.16■■□□□ 1.62
EXOSC3-201ENST00000327304 POLKQ9UBT6 870 aa25.16■■□□□ 1.62
EXOSC3-201ENST00000327304 RRS1Q15050 365 aaKnown RBP25.15■■□□□ 1.62
EXOSC3-201ENST00000327304 EMILIN1Q9Y6C2 1016 aa25.14■■□□□ 1.62
EXOSC3-201ENST00000327304 NFAT5O94916 1531 aa25.14■■□□□ 1.62
EXOSC3-201ENST00000327304 COL16A1Q07092 1604 aaPredicted RBP25.14■■□□□ 1.61
EXOSC3-201ENST00000327304 PNISRQ8TF01 805 aaKnown RBP25.14■■□□□ 1.61
EXOSC3-201ENST00000327304 SMG6Q86US8 1419 aaKnown RBP25.13■■□□□ 1.61
EXOSC3-201ENST00000327304 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
EXOSC3-201ENST00000327304 PHRF1Q9P1Y6 1649 aaKnown RBP25.11■■□□□ 1.61
EXOSC3-201ENST00000327304 CABLES1Q8TDN4 633 aa25.11■■□□□ 1.61
EXOSC3-201ENST00000327304 PPM1GO15355 546 aaPredicted RBP25.1■■□□□ 1.61
EXOSC3-201ENST00000327304 GCP02774 474 aa25.1■■□□□ 1.61
EXOSC3-201ENST00000327304 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
EXOSC3-201ENST00000327304 PEAK1Q9H792 1746 aa25.1■■□□□ 1.61
EXOSC3-201ENST00000327304 MAP3K19Q56UN5 1328 aa25.1■■□□□ 1.61
EXOSC3-201ENST00000327304 KCNH5Q8NCM2 988 aa25.09■■□□□ 1.61
EXOSC3-201ENST00000327304 COL3A1P02461 1466 aaPredicted RBP25.08■■□□□ 1.61
EXOSC3-201ENST00000327304 CDK12Q9NYV4 1490 aaPredicted RBP25.07■■□□□ 1.6
EXOSC3-201ENST00000327304 PNPLA6Q8IY17 1366 aa25.06■■□□□ 1.6
EXOSC3-201ENST00000327304 LTN1O94822 1766 aa25.06■■□□□ 1.6
EXOSC3-201ENST00000327304 CFAP53Q96M91 514 aa25.06■■□□□ 1.6
EXOSC3-201ENST00000327304 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
EXOSC3-201ENST00000327304 ZBED9Q6R2W3 1325 aa25.06■■□□□ 1.6
EXOSC3-201ENST00000327304 INSRP06213 1382 aa25.04■■□□□ 1.6
EXOSC3-201ENST00000327304 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
EXOSC3-201ENST00000327304 COL22A1Q8NFW1 1626 aaPredicted RBP25.02■■□□□ 1.6
EXOSC3-201ENST00000327304 FLT4P35916 1363 aa25.02■■□□□ 1.6
EXOSC3-201ENST00000327304 ZBTB7CA1YPR0 619 aa25.02■■□□□ 1.6
EXOSC3-201ENST00000327304 AMPHP49418 695 aa25.02■■□□□ 1.6
EXOSC3-201ENST00000327304 ARHGEF25Q86VW2 580 aa25.02■■□□□ 1.6
EXOSC3-201ENST00000327304 ZC3H6P61129 1189 aaKnown RBP25.01■■□□□ 1.59
EXOSC3-201ENST00000327304 HSP90AB2PQ58FF8 381 aa25■■□□□ 1.59
EXOSC3-201ENST00000327304 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
EXOSC3-201ENST00000327304 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
EXOSC3-201ENST00000327304 HOXC9P31274 260 aa24.99■■□□□ 1.59
EXOSC3-201ENST00000327304 DIAPH1O60610 1272 aaKnown RBP24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms