RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 SEC24BO95487 1268 aa28.14■■■□□ 2.09
ITM2C-202ENST00000326427 IL16Q14005 1332 aa28.13■■■□□ 2.09
ITM2C-202ENST00000326427 TRIM35Q9UPQ4 493 aa28.13■■■□□ 2.09
ITM2C-202ENST00000326427 CDC42BPGQ6DT37 1551 aa28.12■■■□□ 2.09
ITM2C-202ENST00000326427 PRAM1Q96QH2 718 aa28.12■■■□□ 2.09
ITM2C-202ENST00000326427 PDZRN3Q9UPQ7 1066 aa28.12■■■□□ 2.09
ITM2C-202ENST00000326427 ARHGEF40Q8TER5 1519 aa28.12■■■□□ 2.09
ITM2C-202ENST00000326427 PNPLA6Q8IY17 1366 aa28.12■■■□□ 2.09
ITM2C-202ENST00000326427 DZIP1LQ8IYY4 767 aaKnown RBP28.11■■■□□ 2.09
ITM2C-202ENST00000326427 MINK1Q8N4C8 1332 aaPredicted RBP28.1■■■□□ 2.09
ITM2C-202ENST00000326427 U2SURPO15042 1029 aaKnown RBP28.1■■■□□ 2.09
ITM2C-202ENST00000326427 TSR2Q969E8 191 aaKnown RBP28.1■■■□□ 2.09
ITM2C-202ENST00000326427 GSE1Q14687 1217 aa28.09■■■□□ 2.09
ITM2C-202ENST00000326427 EXOSC9Q06265 439 aaKnown RBP28.08■■■□□ 2.09
ITM2C-202ENST00000326427 POGKQ9P215 609 aa28.08■■■□□ 2.09
ITM2C-202ENST00000326427 FTSJ3Q8IY81 847 aaKnown RBP28.07■■■□□ 2.08
ITM2C-202ENST00000326427 DLC1Q96QB1 1528 aa28.06■■■□□ 2.08
ITM2C-202ENST00000326427 SMC4Q9NTJ3 1288 aa28.06■■■□□ 2.08
ITM2C-202ENST00000326427 HDGFL2Q7Z4V5 671 aaPredicted RBP28.05■■■□□ 2.08
ITM2C-202ENST00000326427 BECN1Q14457 450 aa28.04■■■□□ 2.08
ITM2C-202ENST00000326427 PNNQ9H307 717 aaKnown RBP28.04■■■□□ 2.08
ITM2C-202ENST00000326427 DIAPH1O60610 1272 aaKnown RBP28.03■■■□□ 2.08
ITM2C-202ENST00000326427 TRIM27P14373 513 aa28.03■■■□□ 2.08
ITM2C-202ENST00000326427 SETD1AO15047 1707 aaKnown RBP28.03■■■□□ 2.08
ITM2C-202ENST00000326427 SSH1Q8WYL5 1049 aa28.03■■■□□ 2.08
ITM2C-202ENST00000326427 REREQ9P2R6 1566 aa28.02■■■□□ 2.08
ITM2C-202ENST00000326427 TBC1D32Q96NH3 1257 aa28.02■■■□□ 2.08
ITM2C-202ENST00000326427 CDK19Q9BWU1 502 aa28.02■■■□□ 2.08
ITM2C-202ENST00000326427 LRRC7Q96NW7 1537 aa28.01■■■□□ 2.08
ITM2C-202ENST00000326427 HDAC1Q13547 482 aaPredicted RBP28.01■■■□□ 2.07
ITM2C-202ENST00000326427 ATP7BP35670 1465 aa28.01■■■□□ 2.07
ITM2C-202ENST00000326427 ATF7IPQ6VMQ6 1270 aa28.01■■■□□ 2.07
ITM2C-202ENST00000326427 DDX19BQ9UMR2 479 aa28.01■■■□□ 2.07
ITM2C-202ENST00000326427 FRAT2O75474 233 aaPredicted RBP28■■■□□ 2.07
ITM2C-202ENST00000326427 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
ITM2C-202ENST00000326427 UPF2Q9HAU5 1272 aaKnown RBP28■■■□□ 2.07
ITM2C-202ENST00000326427 RIPK4P57078 832 aa27.99■■■□□ 2.07
ITM2C-202ENST00000326427 SENP3Q9H4L4 574 aaPredicted RBP27.99■■■□□ 2.07
ITM2C-202ENST00000326427 RIMBP3CA6NJZ7 1639 aa27.98■■■□□ 2.07
ITM2C-202ENST00000326427 RIMBP3BA6NNM3 1639 aa27.98■■■□□ 2.07
ITM2C-202ENST00000326427 RIMBP3Q9UFD9 1639 aa27.98■■■□□ 2.07
ITM2C-202ENST00000326427 AGLP35573 1532 aa27.97■■■□□ 2.07
ITM2C-202ENST00000326427 CABP1Q9NZU7 370 aa27.97■■■□□ 2.07
ITM2C-202ENST00000326427 FAM135BQ49AJ0 1406 aa27.97■■■□□ 2.07
ITM2C-202ENST00000326427 FCHSD2O94868 740 aa27.96■■■□□ 2.07
ITM2C-202ENST00000326427 KIF16BQ96L93 1317 aa27.96■■■□□ 2.07
ITM2C-202ENST00000326427 SPATA31D1Q6ZQQ2 1576 aa27.95■■■□□ 2.06
ITM2C-202ENST00000326427 NOB1Q9ULX3 412 aaKnown RBP27.95■■■□□ 2.06
ITM2C-202ENST00000326427 A2ML1A8K2U0 1454 aa27.94■■■□□ 2.06
ITM2C-202ENST00000326427 PPIP5K1Q6PFW1 1433 aa27.94■■■□□ 2.06
ITM2C-202ENST00000326427 MAP2P11137 1827 aaKnown RBP27.94■■■□□ 2.06
ITM2C-202ENST00000326427 ALDH1L2Q3SY69 923 aa27.93■■■□□ 2.06
ITM2C-202ENST00000326427 ITPRIPQ8IWB1 547 aa27.93■■■□□ 2.06
ITM2C-202ENST00000326427 PPP6R1Q9UPN7 881 aa27.93■■■□□ 2.06
ITM2C-202ENST00000326427 SMC5Q8IY18 1101 aa27.91■■■□□ 2.06
ITM2C-202ENST00000326427 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
ITM2C-202ENST00000326427 IL27Q8NEV9 243 aa27.91■■■□□ 2.06
ITM2C-202ENST00000326427 IPO8O15397 1037 aaKnown RBP27.9■■■□□ 2.06
ITM2C-202ENST00000326427 ZBTB40Q9NUA8 1239 aa27.9■■■□□ 2.06
ITM2C-202ENST00000326427 TMEM57Q8N5G2 664 aa27.9■■■□□ 2.06
ITM2C-202ENST00000326427 ANTXR1Q9H6X2 564 aa27.9■■■□□ 2.06
ITM2C-202ENST00000326427 BRPF1P55201 1214 aaPredicted RBP27.89■■■□□ 2.06
ITM2C-202ENST00000326427 POLKQ9UBT6 870 aa27.89■■■□□ 2.06
ITM2C-202ENST00000326427 STAG3Q9UJ98 1225 aa27.89■■■□□ 2.06
ITM2C-202ENST00000326427 ZNF428Q96B54 188 aa27.88■■■□□ 2.05
ITM2C-202ENST00000326427 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
ITM2C-202ENST00000326427 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
ITM2C-202ENST00000326427 CPSF1Q10570 1443 aaKnown RBP27.86■■■□□ 2.05
ITM2C-202ENST00000326427 NRXN3Q9Y4C0 1643 aa27.86■■■□□ 2.05
ITM2C-202ENST00000326427 PRKAR2BP31323 418 aa27.86■■■□□ 2.05
ITM2C-202ENST00000326427 TBC1D2Q9BYX2 928 aa27.86■■■□□ 2.05
ITM2C-202ENST00000326427 EDC4Q6P2E9 1401 aaKnown RBP27.85■■■□□ 2.05
ITM2C-202ENST00000326427 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
ITM2C-202ENST00000326427 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.83■■■□□ 2.05
ITM2C-202ENST00000326427 WAPLQ7Z5K2 1190 aa27.83■■■□□ 2.05
ITM2C-202ENST00000326427 MON2Q7Z3U7 1717 aa27.82■■■□□ 2.04
ITM2C-202ENST00000326427 NFE2L2Q16236 605 aa27.82■■■□□ 2.04
ITM2C-202ENST00000326427 SLKQ9H2G2 1235 aaPredicted RBP27.82■■■□□ 2.04
ITM2C-202ENST00000326427 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
ITM2C-202ENST00000326427 AATKQ6ZMQ8 1374 aa27.79■■■□□ 2.04
ITM2C-202ENST00000326427 PIK3R4Q99570 1358 aa27.79■■■□□ 2.04
ITM2C-202ENST00000326427 CALD1Q05682 793 aaKnown RBP27.79■■■□□ 2.04
ITM2C-202ENST00000326427 NUCB1Q02818 461 aa27.79■■■□□ 2.04
ITM2C-202ENST00000326427 PTCH1Q13635 1447 aa27.79■■■□□ 2.04
ITM2C-202ENST00000326427 C22orf23Q9BZE7 217 aa27.79■■■□□ 2.04
ITM2C-202ENST00000326427 TSPOAP1O95153 1857 aa27.78■■■□□ 2.04
ITM2C-202ENST00000326427 DLG5Q8TDM6 1919 aa27.78■■■□□ 2.04
ITM2C-202ENST00000326427 FBLN1P23142 703 aa27.77■■■□□ 2.04
ITM2C-202ENST00000326427 PHACTR3Q96KR7 559 aa27.77■■■□□ 2.04
ITM2C-202ENST00000326427 AKAP12Q02952 1782 aa27.77■■■□□ 2.04
ITM2C-202ENST00000326427 IL13P35225 146 aa27.76■■■□□ 2.03
ITM2C-202ENST00000326427 ARHGAP45Q92619 1136 aa27.76■■■□□ 2.03
ITM2C-202ENST00000326427 WASLO00401 505 aaPredicted RBP27.76■■■□□ 2.03
ITM2C-202ENST00000326427 BRPF3Q9ULD4 1205 aa27.76■■■□□ 2.03
ITM2C-202ENST00000326427 IFT57Q9NWB7 429 aa27.75■■■□□ 2.03
ITM2C-202ENST00000326427 VAMP4O75379 141 aa27.74■■■□□ 2.03
ITM2C-202ENST00000326427 FAM69CQ0P6D2 419 aa27.74■■■□□ 2.03
ITM2C-202ENST00000326427 C3P01024 1663 aa27.74■■■□□ 2.03
ITM2C-202ENST00000326427 ZNF853P0CG23 659 aa27.74■■■□□ 2.03
ITM2C-202ENST00000326427 MFAP1P55081 439 aaKnown RBP27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms