RNA–Protein interactions for RNA: ENST00000326197.11

SCMH1-201, Transcript of Scm polycomb group protein homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCMH1, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-201ENST00000326197 ZBTB40Q9NUA8 1239 aa12.58□□□□□ -0.4
SCMH1-201ENST00000326197 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
SCMH1-201ENST00000326197 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
SCMH1-201ENST00000326197 MYOM1P52179 1685 aa12.58□□□□□ -0.4
SCMH1-201ENST00000326197 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
SCMH1-201ENST00000326197 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
SCMH1-201ENST00000326197 ERBB4Q15303 1308 aa12.57□□□□□ -0.4
SCMH1-201ENST00000326197 RBM25P49756 843 aaKnown RBP12.57□□□□□ -0.4
SCMH1-201ENST00000326197 SNX21Q969T3 373 aa12.57□□□□□ -0.4
SCMH1-201ENST00000326197 RAB3GAP1Q15042 981 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 FOXD4L5Q5VV16 416 aaPredicted RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 FOXD4L4Q8WXT5 416 aaPredicted RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 HMOX1P09601 288 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 CAVIN1Q6NZI2 390 aaKnown RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 KIAA1211Q6ZU35 1233 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 ARID3AQ99856 593 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 TRIM35Q9UPQ4 493 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
SCMH1-201ENST00000326197 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 CFAP65Q6ZU64 1925 aaKnown RBP12.56□□□□□ -0.4
SCMH1-201ENST00000326197 CEP152O94986 1710 aa12.55□□□□□ -0.4
SCMH1-201ENST00000326197 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
SCMH1-201ENST00000326197 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
SCMH1-201ENST00000326197 CCDC173Q0VFZ6 552 aa12.55□□□□□ -0.4
SCMH1-201ENST00000326197 GAS2L2Q8NHY3 880 aa12.55□□□□□ -0.4
SCMH1-201ENST00000326197 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
SCMH1-201ENST00000326197 ZNF518AQ6AHZ1 1483 aa12.55□□□□□ -0.4
SCMH1-201ENST00000326197 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
SCMH1-201ENST00000326197 CDC45O75419 566 aa12.54□□□□□ -0.4
SCMH1-201ENST00000326197 ERCC6L2Q5T890 1561 aa12.54□□□□□ -0.4
SCMH1-201ENST00000326197 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
SCMH1-201ENST00000326197 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
SCMH1-201ENST00000326197 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
SCMH1-201ENST00000326197 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
SCMH1-201ENST00000326197 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
SCMH1-201ENST00000326197 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.4
SCMH1-201ENST00000326197 TPM2P07951 284 aa12.52□□□□□ -0.4
SCMH1-201ENST00000326197 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.4
SCMH1-201ENST00000326197 ABCC11Q96J66 1382 aa12.52□□□□□ -0.4
SCMH1-201ENST00000326197 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.4
SCMH1-201ENST00000326197 ABCC1P33527 1531 aa12.52□□□□□ -0.4
SCMH1-201ENST00000326197 FBLN1P23142 703 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
SCMH1-201ENST00000326197 ANKRD36BQ8N2N9 1353 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.41
SCMH1-201ENST00000326197 R3HCC1Q9Y3T6 440 aaKnown RBP12.51□□□□□ -0.41
SCMH1-201ENST00000326197 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
SCMH1-201ENST00000326197 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
SCMH1-201ENST00000326197 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
SCMH1-201ENST00000326197 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
SCMH1-201ENST00000326197 STAG3Q9UJ98 1225 aa12.5□□□□□ -0.41
SCMH1-201ENST00000326197 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
SCMH1-201ENST00000326197 NUCB2P80303 420 aa12.5□□□□□ -0.41
SCMH1-201ENST00000326197 MYOM2P54296 1465 aa12.5□□□□□ -0.41
SCMH1-201ENST00000326197 NSD2O96028 1365 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 IL16Q14005 1332 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 RABEP1Q15276 862 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
SCMH1-201ENST00000326197 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
SCMH1-201ENST00000326197 FANCAO15360 1455 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 ST18O60284 1047 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 PLEKHF1Q96S99 279 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 FYB1O15117 783 aa12.49□□□□□ -0.41
SCMH1-201ENST00000326197 TET3O43151 1660 aa12.48□□□□□ -0.41
SCMH1-201ENST00000326197 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
SCMH1-201ENST00000326197 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
SCMH1-201ENST00000326197 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
SCMH1-201ENST00000326197 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
SCMH1-201ENST00000326197 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
SCMH1-201ENST00000326197 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
SCMH1-201ENST00000326197 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
SCMH1-201ENST00000326197 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
SCMH1-201ENST00000326197 GNAI1P63096 354 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
SCMH1-201ENST00000326197 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 KIF1BO60333 1816 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 INTS3Q68E01 1043 aaKnown RBP12.47□□□□□ -0.41
SCMH1-201ENST00000326197 KIF2CQ99661 725 aa12.47□□□□□ -0.41
SCMH1-201ENST00000326197 API5Q9BZZ5 524 aaKnown RBP12.47□□□□□ -0.41
SCMH1-201ENST00000326197 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
SCMH1-201ENST00000326197 FCHSD2O94868 740 aa12.46□□□□□ -0.41
SCMH1-201ENST00000326197 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCMH1-201ENST00000326197 DDIT3P35638 169 aa12.46□□□□□ -0.41
SCMH1-201ENST00000326197 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
SCMH1-201ENST00000326197 SHPRHQ149N8 1683 aa12.46□□□□□ -0.42
SCMH1-201ENST00000326197 XPCQ01831 940 aaPredicted RBP12.46□□□□□ -0.42
SCMH1-201ENST00000326197 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.42
SCMH1-201ENST00000326197 CFAP44Q96MT7 982 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms