RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 U2SURPO15042 1029 aaKnown RBP18.58■□□□□ 0.56
SCAP-202ENST00000320017 PAXIP1Q6ZW49 1069 aaPredicted RBP18.58■□□□□ 0.56
SCAP-202ENST00000320017 MAST1Q9Y2H9 1570 aa18.58■□□□□ 0.56
SCAP-202ENST00000320017 ZBTB22O15209 634 aa18.57■□□□□ 0.56
SCAP-202ENST00000320017 MCTP1Q6DN14 999 aa18.57■□□□□ 0.56
SCAP-202ENST00000320017 PTMSP20962 102 aa18.56■□□□□ 0.56
SCAP-202ENST00000320017 ZNF771Q7L3S4 317 aaPredicted RBP18.56■□□□□ 0.56
SCAP-202ENST00000320017 ZNF692Q9BU19 519 aaPredicted RBP18.56■□□□□ 0.56
SCAP-202ENST00000320017 ZKSCAN5Q9Y2L8 839 aa18.56■□□□□ 0.56
SCAP-202ENST00000320017 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
SCAP-202ENST00000320017 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
SCAP-202ENST00000320017 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
SCAP-202ENST00000320017 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
SCAP-202ENST00000320017 NOS1P29475 1434 aa18.55■□□□□ 0.56
SCAP-202ENST00000320017 RLBP1P12271 317 aa18.55■□□□□ 0.56
SCAP-202ENST00000320017 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
SCAP-202ENST00000320017 E9PSI1 815 aa18.55■□□□□ 0.56
SCAP-202ENST00000320017 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
SCAP-202ENST00000320017 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
SCAP-202ENST00000320017 PLXNC1O60486 1568 aa18.54■□□□□ 0.56
SCAP-202ENST00000320017 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
SCAP-202ENST00000320017 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
SCAP-202ENST00000320017 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
SCAP-202ENST00000320017 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
SCAP-202ENST00000320017 MTHFSP49914 203 aa18.53■□□□□ 0.56
SCAP-202ENST00000320017 KIF20AO95235 890 aa18.52■□□□□ 0.56
SCAP-202ENST00000320017 GTPBP4Q9BZE4 634 aaKnown RBP18.52■□□□□ 0.56
SCAP-202ENST00000320017 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
SCAP-202ENST00000320017 LETM1O95202 739 aaPredicted RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 NKTRP30414 1462 aaKnown RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 PRIM1P49642 420 aaKnown RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 IPO4Q8TEX9 1081 aaKnown RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 TMEM51Q9NW97 253 aa18.51■□□□□ 0.55
SCAP-202ENST00000320017 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 CIZ1Q9ULV3 898 aaPredicted RBP18.51■□□□□ 0.55
SCAP-202ENST00000320017 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 CABP2Q9NPB3 220 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 GPRASP1Q5JY77 1395 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 FTSJ3Q8IY81 847 aaKnown RBP18.5■□□□□ 0.55
SCAP-202ENST00000320017 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.5■□□□□ 0.55
SCAP-202ENST00000320017 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 UNC13BO14795 1591 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 NPATQ14207 1427 aa18.5■□□□□ 0.55
SCAP-202ENST00000320017 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
SCAP-202ENST00000320017 ATP2B3Q16720 1220 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 ZSCAN23Q3MJ62 389 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 TAF7LQ5H9L4 462 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 IQGAP3Q86VI3 1631 aa18.49■□□□□ 0.55
SCAP-202ENST00000320017 TPRNQ4KMQ1 711 aa18.48■□□□□ 0.55
SCAP-202ENST00000320017 ZNF830Q96NB3 372 aaPredicted RBP18.48■□□□□ 0.55
SCAP-202ENST00000320017 BAG4O95429 457 aaKnown RBP18.48■□□□□ 0.55
SCAP-202ENST00000320017 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
SCAP-202ENST00000320017 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
SCAP-202ENST00000320017 HS1BP3Q53T59 392 aa18.48■□□□□ 0.55
SCAP-202ENST00000320017 SMC5Q8IY18 1101 aa18.48■□□□□ 0.55
SCAP-202ENST00000320017 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
SCAP-202ENST00000320017 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
SCAP-202ENST00000320017 NUTM2FA1L443 756 aa18.47■□□□□ 0.55
SCAP-202ENST00000320017 FBLN1P23142 703 aa18.47■□□□□ 0.55
SCAP-202ENST00000320017 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
SCAP-202ENST00000320017 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
SCAP-202ENST00000320017 TSPOAP1O95153 1857 aa18.46■□□□□ 0.55
SCAP-202ENST00000320017 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
SCAP-202ENST00000320017 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
SCAP-202ENST00000320017 ITPRIPQ8IWB1 547 aa18.45■□□□□ 0.54
SCAP-202ENST00000320017 SYCE3A1L190 88 aa18.44■□□□□ 0.54
SCAP-202ENST00000320017 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
SCAP-202ENST00000320017 ELL2O00472 640 aaPredicted RBP18.44■□□□□ 0.54
SCAP-202ENST00000320017 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
SCAP-202ENST00000320017 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
SCAP-202ENST00000320017 PDCL2Q8N4E4 241 aa18.44■□□□□ 0.54
SCAP-202ENST00000320017 E9PCH4 1651 aa18.44■□□□□ 0.54
SCAP-202ENST00000320017 C17orf53Q8N3J3 647 aaPredicted RBP18.43■□□□□ 0.54
SCAP-202ENST00000320017 MYRIPQ8NFW9 859 aa18.43■□□□□ 0.54
SCAP-202ENST00000320017 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
SCAP-202ENST00000320017 K7ELQ4 463 aaPredicted RBP18.43■□□□□ 0.54
SCAP-202ENST00000320017 PLCB2Q00722 1185 aa18.43■□□□□ 0.54
SCAP-202ENST00000320017 ARAP3Q8WWN8 1544 aa18.43■□□□□ 0.54
SCAP-202ENST00000320017 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
SCAP-202ENST00000320017 KIF3AQ9Y496 699 aa18.42■□□□□ 0.54
SCAP-202ENST00000320017 LNPKQ9C0E8 428 aa18.42■□□□□ 0.54
SCAP-202ENST00000320017 U2AF2P26368 475 aaKnown RBP eCLIP18.42■□□□□ 0.545e-6■□□□□ 11
SCAP-202ENST00000320017 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
SCAP-202ENST00000320017 PTPRTO14522 1441 aa18.41■□□□□ 0.54
SCAP-202ENST00000320017 KCNJ4P48050 445 aa18.41■□□□□ 0.54
SCAP-202ENST00000320017 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
SCAP-202ENST00000320017 SCAF11Q99590 1463 aaKnown RBP18.41■□□□□ 0.54
SCAP-202ENST00000320017 PRAM1Q96QH2 718 aa18.4■□□□□ 0.54
SCAP-202ENST00000320017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCAP-202ENST00000320017 ZNF445P59923 1031 aa18.4■□□□□ 0.54
SCAP-202ENST00000320017 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
SCAP-202ENST00000320017 KIDINS220Q9ULH0 1771 aa18.4■□□□□ 0.54
SCAP-202ENST00000320017 MCM5P33992 734 aa18.39■□□□□ 0.54
SCAP-202ENST00000320017 DDIT3P35638 169 aa18.39■□□□□ 0.54
SCAP-202ENST00000320017 NSD3Q9BZ95 1437 aa18.39■□□□□ 0.53
SCAP-202ENST00000320017 SNX21Q969T3 373 aa18.39■□□□□ 0.53
SCAP-202ENST00000320017 INO80Q9ULG1 1556 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms