RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 BACH2Q9BYV9 841 aa20.25■□□□□ 0.83
TSC22D3-201ENST00000315660 MYH16Q9H6N6 1097 aa20.25■□□□□ 0.83
TSC22D3-201ENST00000315660 PNPLA6Q8IY17 1366 aa20.24■□□□□ 0.83
TSC22D3-201ENST00000315660 WASLO00401 505 aaPredicted RBP20.24■□□□□ 0.83
TSC22D3-201ENST00000315660 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
TSC22D3-201ENST00000315660 TXNDC2Q86VQ3 553 aa20.23■□□□□ 0.83
TSC22D3-201ENST00000315660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
TSC22D3-201ENST00000315660 TMEM2Q9UHN6 1383 aa20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 TECPR2O15040 1411 aa20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
TSC22D3-201ENST00000315660 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
TSC22D3-201ENST00000315660 MAPK8IP3Q9UPT6 1336 aa20.21■□□□□ 0.83
TSC22D3-201ENST00000315660 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
TSC22D3-201ENST00000315660 TMPOP42166 694 aaKnown RBP20.21■□□□□ 0.83
TSC22D3-201ENST00000315660 UBR1Q8IWV7 1749 aa20.2■□□□□ 0.82
TSC22D3-201ENST00000315660 PPIP5K1Q6PFW1 1433 aa20.2■□□□□ 0.82
TSC22D3-201ENST00000315660 CPS1P31327 1500 aa20.19■□□□□ 0.82
TSC22D3-201ENST00000315660 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
TSC22D3-201ENST00000315660 PANK1Q8TE04 598 aa20.19■□□□□ 0.82
TSC22D3-201ENST00000315660 EDC4Q6P2E9 1401 aaKnown RBP20.19■□□□□ 0.82
TSC22D3-201ENST00000315660 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
TSC22D3-201ENST00000315660 TRIM35Q9UPQ4 493 aa20.18■□□□□ 0.82
TSC22D3-201ENST00000315660 NUDT16Q96DE0 195 aaKnown RBP20.17■□□□□ 0.82
TSC22D3-201ENST00000315660 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
TSC22D3-201ENST00000315660 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
TSC22D3-201ENST00000315660 CDC42BPGQ6DT37 1551 aa20.16■□□□□ 0.82
TSC22D3-201ENST00000315660 CT47B1P0C2W7 299 aaPredicted RBP20.15■□□□□ 0.82
TSC22D3-201ENST00000315660 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
TSC22D3-201ENST00000315660 FBLN1P23142 703 aa20.15■□□□□ 0.82
TSC22D3-201ENST00000315660 AAMPQ13685 434 aa20.15■□□□□ 0.82
TSC22D3-201ENST00000315660 CLUAP1Q96AJ1 413 aa20.15■□□□□ 0.82
TSC22D3-201ENST00000315660 CCDC61Q9Y6R9 512 aa20.14■□□□□ 0.81
TSC22D3-201ENST00000315660 BCL2L13Q9BXK5 485 aa20.14■□□□□ 0.81
TSC22D3-201ENST00000315660 PPM1GO15355 546 aaPredicted RBP20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 FCHSD2O94868 740 aa20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 NME9Q86XW9 330 aa20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 IL16Q14005 1332 aa20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
TSC22D3-201ENST00000315660 RIPK4P57078 832 aa20.12■□□□□ 0.81
TSC22D3-201ENST00000315660 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
TSC22D3-201ENST00000315660 NEFMP07197 916 aa20.12■□□□□ 0.81
TSC22D3-201ENST00000315660 IGHDP01880 384 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 LRRC7Q96NW7 1537 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 PLEKHG1Q9ULL1 1385 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 RLBP1P12271 317 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 LTKP29376 864 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 TNNQ9UQP3 1299 aa20.11■□□□□ 0.81
TSC22D3-201ENST00000315660 RSPH6AQ9H0K4 717 aa20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 MON2Q7Z3U7 1717 aa20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 MAP2P11137 1827 aaKnown RBP20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 ZRANB1Q9UGI0 708 aa20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 EMILIN1Q9Y6C2 1016 aa20.1■□□□□ 0.81
TSC22D3-201ENST00000315660 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
TSC22D3-201ENST00000315660 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
TSC22D3-201ENST00000315660 PRKAR2BP31323 418 aa20.08■□□□□ 0.8
TSC22D3-201ENST00000315660 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.8
TSC22D3-201ENST00000315660 COG3Q96JB2 828 aa20.07■□□□□ 0.8
TSC22D3-201ENST00000315660 ZNF692Q9BU19 519 aaPredicted RBP20.07■□□□□ 0.8
TSC22D3-201ENST00000315660 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
TSC22D3-201ENST00000315660 RGS3P49796 1198 aa20.07■□□□□ 0.8
TSC22D3-201ENST00000315660 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
TSC22D3-201ENST00000315660 IL13P35225 146 aa20.06■□□□□ 0.8
TSC22D3-201ENST00000315660 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
TSC22D3-201ENST00000315660 PMFBP1Q8TBY8 1022 aa20.06■□□□□ 0.8
TSC22D3-201ENST00000315660 C3P01024 1663 aa20.06■□□□□ 0.8
TSC22D3-201ENST00000315660 ITSN1Q15811 1721 aa20.05■□□□□ 0.8
TSC22D3-201ENST00000315660 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
TSC22D3-201ENST00000315660 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
TSC22D3-201ENST00000315660 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
TSC22D3-201ENST00000315660 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
TSC22D3-201ENST00000315660 HMOX1P09601 288 aa20.03■□□□□ 0.8
TSC22D3-201ENST00000315660 EID1Q9Y6B2 187 aa20.03■□□□□ 0.8
TSC22D3-201ENST00000315660 SSH1Q8WYL5 1049 aa20.03■□□□□ 0.8
TSC22D3-201ENST00000315660 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 PCDHB15Q9Y5E8 787 aa20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 PTPRUQ92729 1446 aa20.02■□□□□ 0.8
TSC22D3-201ENST00000315660 SLIT1O75093 1534 aa20.01■□□□□ 0.79
TSC22D3-201ENST00000315660 ARHGAP23Q9P227 1491 aa20.01■□□□□ 0.79
TSC22D3-201ENST00000315660 RRS1Q15050 365 aaKnown RBP20.01■□□□□ 0.79
TSC22D3-201ENST00000315660 DDRGK1Q96HY6 314 aa20.01■□□□□ 0.79
TSC22D3-201ENST00000315660 TOPAZ1Q8N9V7 1692 aa20■□□□□ 0.79
TSC22D3-201ENST00000315660 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
TSC22D3-201ENST00000315660 PLEKHG3A1L390 1219 aa19.99■□□□□ 0.79
TSC22D3-201ENST00000315660 ACEP12821 1306 aa19.99■□□□□ 0.79
TSC22D3-201ENST00000315660 TTC21BQ7Z4L5 1316 aa19.99■□□□□ 0.79
TSC22D3-201ENST00000315660 USP35Q9P2H5 1018 aa19.99■□□□□ 0.79
TSC22D3-201ENST00000315660 TRIM27P14373 513 aa19.98■□□□□ 0.79
TSC22D3-201ENST00000315660 NRKQ7Z2Y5 1582 aa19.98■□□□□ 0.79
TSC22D3-201ENST00000315660 RWDD1Q9H446 243 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms