RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CFAP65Q6ZU64 1925 aaKnown RBP16.99■□□□□ 0.31
DDX54-202ENST00000314045 ZCCHC11Q5TAX3 1644 aaKnown RBP16.98■□□□□ 0.31
DDX54-202ENST00000314045 MEX3CQ5U5Q3 659 aaKnown RBP16.98■□□□□ 0.31
DDX54-202ENST00000314045 GCC2Q8IWJ2 1684 aa16.98■□□□□ 0.31
DDX54-202ENST00000314045 NPATQ14207 1427 aa16.98■□□□□ 0.31
DDX54-202ENST00000314045 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
DDX54-202ENST00000314045 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
DDX54-202ENST00000314045 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
DDX54-202ENST00000314045 EIF2AK4Q9P2K8 1649 aaKnown RBP16.97■□□□□ 0.31
DDX54-202ENST00000314045 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
DDX54-202ENST00000314045 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
DDX54-202ENST00000314045 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
DDX54-202ENST00000314045 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
DDX54-202ENST00000314045 LNPKQ9C0E8 428 aa16.97■□□□□ 0.31
DDX54-202ENST00000314045 CARD14Q9BXL6 1004 aa16.96■□□□□ 0.31
DDX54-202ENST00000314045 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
DDX54-202ENST00000314045 KDM6BO15054 1643 aa16.96■□□□□ 0.31
DDX54-202ENST00000314045 ABCC1P33527 1531 aa16.96■□□□□ 0.3
DDX54-202ENST00000314045 DCTN1Q14203 1278 aa16.96■□□□□ 0.3
DDX54-202ENST00000314045 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.3
DDX54-202ENST00000314045 ADGBQ8N7X0 1667 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 CADPS2Q86UW7 1296 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
DDX54-202ENST00000314045 RILPL2Q969X0 211 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 SLKQ9H2G2 1235 aaPredicted RBP16.95■□□□□ 0.3
DDX54-202ENST00000314045 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
DDX54-202ENST00000314045 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
DDX54-202ENST00000314045 NUTM2BA6NNL0 878 aaPredicted RBP16.94■□□□□ 0.3
DDX54-202ENST00000314045 NUTM2EB1AL46 878 aaPredicted RBP16.94■□□□□ 0.3
DDX54-202ENST00000314045 NUTM2AQ8IVF1 878 aaPredicted RBP16.94■□□□□ 0.3
DDX54-202ENST00000314045 KCNA6P17658 529 aa16.94■□□□□ 0.3
DDX54-202ENST00000314045 MCM10Q7L590 875 aa16.94■□□□□ 0.3
DDX54-202ENST00000314045 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
DDX54-202ENST00000314045 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
DDX54-202ENST00000314045 PREX2Q70Z35 1606 aa16.93■□□□□ 0.3
DDX54-202ENST00000314045 MLH3Q9UHC1 1453 aa16.93■□□□□ 0.3
DDX54-202ENST00000314045 PARD3Q8TEW0 1356 aa16.93■□□□□ 0.3
DDX54-202ENST00000314045 ZFYVE16Q7Z3T8 1539 aa16.93■□□□□ 0.3
DDX54-202ENST00000314045 USHBP1Q8N6Y0 703 aa16.93■□□□□ 0.3
DDX54-202ENST00000314045 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 PIP4K2BP78356 416 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 GNAI3P08754 354 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 HSPA2P54652 639 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 PPIP5K1Q6PFW1 1433 aa16.92■□□□□ 0.3
DDX54-202ENST00000314045 CABP4P57796 275 aa16.91■□□□□ 0.3
DDX54-202ENST00000314045 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
DDX54-202ENST00000314045 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
DDX54-202ENST00000314045 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
DDX54-202ENST00000314045 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
DDX54-202ENST00000314045 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.32e-6■■■■□ 22.1
DDX54-202ENST00000314045 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
DDX54-202ENST00000314045 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
DDX54-202ENST00000314045 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.3
DDX54-202ENST00000314045 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
DDX54-202ENST00000314045 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
DDX54-202ENST00000314045 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
DDX54-202ENST00000314045 COL17A1Q9UMD9 1497 aaPredicted RBP16.88■□□□□ 0.29
DDX54-202ENST00000314045 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
DDX54-202ENST00000314045 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
DDX54-202ENST00000314045 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
DDX54-202ENST00000314045 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
DDX54-202ENST00000314045 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
DDX54-202ENST00000314045 RARSP54136 660 aaKnown RBP16.87■□□□□ 0.29
DDX54-202ENST00000314045 MVPQ14764 893 aaKnown RBP16.87■□□□□ 0.29
DDX54-202ENST00000314045 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
DDX54-202ENST00000314045 TMX4Q9H1E5 349 aaPredicted RBP16.87■□□□□ 0.29
DDX54-202ENST00000314045 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
DDX54-202ENST00000314045 FRAT2O75474 233 aaPredicted RBP16.87■□□□□ 0.29
DDX54-202ENST00000314045 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
DDX54-202ENST00000314045 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
DDX54-202ENST00000314045 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
DDX54-202ENST00000314045 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
DDX54-202ENST00000314045 TMEM2Q9UHN6 1383 aa16.85■□□□□ 0.29
DDX54-202ENST00000314045 LTKP29376 864 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
DDX54-202ENST00000314045 MSH5O43196 834 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
DDX54-202ENST00000314045 TAF7Q15545 349 aaPredicted RBP16.84■□□□□ 0.29
DDX54-202ENST00000314045 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
DDX54-202ENST00000314045 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 CDC42BPAQ5VT25 1732 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 MAGI2Q86UL8 1455 aa16.84■□□□□ 0.29
DDX54-202ENST00000314045 GNAI2P04899 355 aa16.83■□□□□ 0.29
DDX54-202ENST00000314045 NOL8Q76FK4 1167 aaKnown RBP16.83■□□□□ 0.29
DDX54-202ENST00000314045 MSH6P52701 1360 aa16.83■□□□□ 0.29
DDX54-202ENST00000314045 SRCIN1Q9C0H9 1055 aa16.83■□□□□ 0.28
DDX54-202ENST00000314045 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
DDX54-202ENST00000314045 C20orf194Q5TEA3 1177 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 GOLGA6L4A6NEF3 574 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 ST18O60284 1047 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 MPRIPQ6WCQ1 1025 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 REC8O95072 547 aa16.82■□□□□ 0.28
DDX54-202ENST00000314045 TMEM57Q8N5G2 664 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms