RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CCDC34Q96HJ3 373 aa20.89■□□□□ 0.93
GABRB3-202ENST00000311550 NKTRP30414 1462 aaKnown RBP20.88■□□□□ 0.93
GABRB3-202ENST00000311550 RPGRIP1LQ68CZ1 1315 aa20.87■□□□□ 0.93
GABRB3-202ENST00000311550 GNAI2P04899 355 aa20.87■□□□□ 0.93
GABRB3-202ENST00000311550 SSH1Q8WYL5 1049 aa20.87■□□□□ 0.93
GABRB3-202ENST00000311550 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
GABRB3-202ENST00000311550 RTEL1-TNFRSF6BF6WH68 1400 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 FCHSD2O94868 740 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 VSIG10Q8N0Z9 540 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 ZNF592Q92610 1267 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 ZNF428Q96B54 188 aa20.86■□□□□ 0.93
GABRB3-202ENST00000311550 GTF2E1P29083 439 aaPredicted RBP20.85■□□□□ 0.93
GABRB3-202ENST00000311550 K7ELQ4 463 aaPredicted RBP20.85■□□□□ 0.93
GABRB3-202ENST00000311550 RAPGEF4Q8WZA2 1011 aa20.85■□□□□ 0.93
GABRB3-202ENST00000311550 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
GABRB3-202ENST00000311550 ATAD2Q6PL18 1390 aa20.85■□□□□ 0.93
GABRB3-202ENST00000311550 CNTROBQ8N137 903 aa20.85■□□□□ 0.93
GABRB3-202ENST00000311550 CLASRPQ8N2M8 674 aaKnown RBP20.85■□□□□ 0.93
GABRB3-202ENST00000311550 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
GABRB3-202ENST00000311550 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
GABRB3-202ENST00000311550 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
GABRB3-202ENST00000311550 APPP05067 770 aa20.84■□□□□ 0.93
GABRB3-202ENST00000311550 EVA1CP58658 441 aa20.84■□□□□ 0.93
GABRB3-202ENST00000311550 MCM4P33991 863 aa20.83■□□□□ 0.93
GABRB3-202ENST00000311550 CPLX1O14810 134 aa20.83■□□□□ 0.92
GABRB3-202ENST00000311550 NFE2L2Q16236 605 aa20.83■□□□□ 0.92
GABRB3-202ENST00000311550 LRPPRCP42704 1394 aaKnown RBP20.82■□□□□ 0.92
GABRB3-202ENST00000311550 HDGFL1Q5TGJ6 251 aa20.82■□□□□ 0.92
GABRB3-202ENST00000311550 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.82■□□□□ 0.92
GABRB3-202ENST00000311550 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
GABRB3-202ENST00000311550 FSD1Q9BTV5 496 aa20.82■□□□□ 0.92
GABRB3-202ENST00000311550 DCTN1Q14203 1278 aa20.81■□□□□ 0.92
GABRB3-202ENST00000311550 MAP4K4O95819 1239 aaPredicted RBP20.81■□□□□ 0.92
GABRB3-202ENST00000311550 ZNF692Q9BU19 519 aaPredicted RBP20.81■□□□□ 0.92
GABRB3-202ENST00000311550 GPRASP1Q5JY77 1395 aa20.8■□□□□ 0.92
GABRB3-202ENST00000311550 R3HCC1Q9Y3T6 440 aaKnown RBP20.8■□□□□ 0.92
GABRB3-202ENST00000311550 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
GABRB3-202ENST00000311550 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.8■□□□□ 0.92
GABRB3-202ENST00000311550 IGHDP01880 384 aa20.79■□□□□ 0.92
GABRB3-202ENST00000311550 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
GABRB3-202ENST00000311550 CHMP4CQ96CF2 233 aa20.79■□□□□ 0.92
GABRB3-202ENST00000311550 LRRCC1Q9C099 1032 aa20.79■□□□□ 0.92
GABRB3-202ENST00000311550 MIS18AQ9NYP9 233 aa20.79■□□□□ 0.92
GABRB3-202ENST00000311550 CLSTN1O94985 981 aa20.79■□□□□ 0.92
GABRB3-202ENST00000311550 CCT4P50991 539 aaKnown RBP20.79■□□□□ 0.92
GABRB3-202ENST00000311550 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
GABRB3-202ENST00000311550 SASS6Q6UVJ0 657 aa20.78■□□□□ 0.92
GABRB3-202ENST00000311550 ANO8Q9HCE9 1232 aaPredicted RBP20.78■□□□□ 0.92
GABRB3-202ENST00000311550 PES1O00541 588 aaKnown RBP20.78■□□□□ 0.92
GABRB3-202ENST00000311550 SCAF11Q99590 1463 aaKnown RBP20.78■□□□□ 0.92
GABRB3-202ENST00000311550 FIBPO43427 364 aa20.77■□□□□ 0.92
GABRB3-202ENST00000311550 ESCO1Q5FWF5 840 aa20.77■□□□□ 0.92
GABRB3-202ENST00000311550 SYNE3Q6ZMZ3 975 aa20.77■□□□□ 0.92
GABRB3-202ENST00000311550 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
GABRB3-202ENST00000311550 GRPEL1Q9HAV7 217 aa20.77■□□□□ 0.92
GABRB3-202ENST00000311550 MBD3O95983 291 aa20.76■□□□□ 0.91
GABRB3-202ENST00000311550 AKAP17AQ02040 695 aaKnown RBP20.76■□□□□ 0.91
GABRB3-202ENST00000311550 MCM10Q7L590 875 aa20.76■□□□□ 0.91
GABRB3-202ENST00000311550 MCM2P49736 904 aa20.76■□□□□ 0.91
GABRB3-202ENST00000311550 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
GABRB3-202ENST00000311550 TRIM27P14373 513 aa20.75■□□□□ 0.91
GABRB3-202ENST00000311550 IL1RAPL2Q9NP60 686 aa20.75■□□□□ 0.91
GABRB3-202ENST00000311550 TRDNQ13061 729 aa20.75■□□□□ 0.91
GABRB3-202ENST00000311550 TRIM29Q14134 588 aa20.75■□□□□ 0.91
GABRB3-202ENST00000311550 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
GABRB3-202ENST00000311550 WASHC4Q2M389 1173 aa20.74■□□□□ 0.91
GABRB3-202ENST00000311550 CCAR2Q8N163 923 aaKnown RBP20.74■□□□□ 0.91
GABRB3-202ENST00000311550 DNAJC2Q99543 621 aaKnown RBP20.74■□□□□ 0.91
GABRB3-202ENST00000311550 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
GABRB3-202ENST00000311550 BCL11BQ9C0K0 894 aaPredicted RBP20.74■□□□□ 0.91
GABRB3-202ENST00000311550 EMILIN1Q9Y6C2 1016 aa20.74■□□□□ 0.91
GABRB3-202ENST00000311550 CCDC39Q9UFE4 941 aa20.74■□□□□ 0.91
GABRB3-202ENST00000311550 EXOC6BQ9Y2D4 811 aa20.74■□□□□ 0.91
GABRB3-202ENST00000311550 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 NME9Q86XW9 330 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 MPNDQ8N594 471 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 SMARCA5O60264 1052 aaPredicted RBP20.73■□□□□ 0.91
GABRB3-202ENST00000311550 PSMA5P28066 241 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 PLEKHO1Q53GL0 409 aaPredicted RBP20.73■□□□□ 0.91
GABRB3-202ENST00000311550 TBC1D2Q9BYX2 928 aa20.73■□□□□ 0.91
GABRB3-202ENST00000311550 NOS1P29475 1434 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 TSPY26PQ9H489 355 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 IFT57Q9NWB7 429 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 CCDC61Q9Y6R9 512 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 FAM135AQ9P2D6 1515 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 NFXL1Q6ZNB6 911 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 CWC22Q9HCG8 908 aaKnown RBP20.72■□□□□ 0.91
GABRB3-202ENST00000311550 ADGRL1O94910 1474 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 SIL1Q9H173 461 aa20.72■□□□□ 0.91
GABRB3-202ENST00000311550 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
GABRB3-202ENST00000311550 RPAP2Q8IXW5 612 aaPredicted RBP20.71■□□□□ 0.91
GABRB3-202ENST00000311550 CCDC173Q0VFZ6 552 aa20.71■□□□□ 0.91
GABRB3-202ENST00000311550 TPM3P06753 285 aa20.71■□□□□ 0.91
GABRB3-202ENST00000311550 SRGAP3O43295 1099 aa20.7■□□□□ 0.9
GABRB3-202ENST00000311550 KDM4AO75164 1064 aa20.7■□□□□ 0.9
GABRB3-202ENST00000311550 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
GABRB3-202ENST00000311550 IDI1Q13907 227 aa20.69■□□□□ 0.9
GABRB3-202ENST00000311550 CIZ1Q9ULV3 898 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms