RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
COL6A2-202ENST00000310645 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
COL6A2-202ENST00000310645 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
COL6A2-202ENST00000310645 MCTP1Q6DN14 999 aa18.26■□□□□ 0.51
COL6A2-202ENST00000310645 TBC1D9Q6ZT07 1266 aa18.26■□□□□ 0.51
COL6A2-202ENST00000310645 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
COL6A2-202ENST00000310645 TRIM35Q9UPQ4 493 aa18.25■□□□□ 0.51
COL6A2-202ENST00000310645 SHPRHQ149N8 1683 aa18.25■□□□□ 0.51
COL6A2-202ENST00000310645 CAVIN1Q6NZI2 390 aaKnown RBP18.25■□□□□ 0.51
COL6A2-202ENST00000310645 R3HCC1Q9Y3T6 440 aaKnown RBP18.25■□□□□ 0.51
COL6A2-202ENST00000310645 FAM13BQ9NYF5 915 aa18.24■□□□□ 0.51
COL6A2-202ENST00000310645 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
COL6A2-202ENST00000310645 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
COL6A2-202ENST00000310645 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
COL6A2-202ENST00000310645 BAG4O95429 457 aaKnown RBP18.24■□□□□ 0.51
COL6A2-202ENST00000310645 CT47B1P0C2W7 299 aaPredicted RBP18.24■□□□□ 0.51
COL6A2-202ENST00000310645 BMP2KLQ5H9B9 411 aa18.23■□□□□ 0.51
COL6A2-202ENST00000310645 PDCL3Q9H2J4 239 aa18.23■□□□□ 0.51
COL6A2-202ENST00000310645 PTMSP20962 102 aa18.23■□□□□ 0.51
COL6A2-202ENST00000310645 CALD1Q05682 793 aaKnown RBP18.22■□□□□ 0.51
COL6A2-202ENST00000310645 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
COL6A2-202ENST00000310645 ZBTB7CA1YPR0 619 aa18.21■□□□□ 0.51
COL6A2-202ENST00000310645 PLCH2O75038 1416 aa18.21■□□□□ 0.51
COL6A2-202ENST00000310645 KLHL40Q2TBA0 621 aa18.2■□□□□ 0.5
COL6A2-202ENST00000310645 PPP1R9BQ96SB3 815 aa18.2■□□□□ 0.5
COL6A2-202ENST00000310645 NOS1P29475 1434 aa18.2■□□□□ 0.5
COL6A2-202ENST00000310645 OFD1O75665 1012 aa18.2■□□□□ 0.5
COL6A2-202ENST00000310645 XPCQ01831 940 aaPredicted RBP18.2■□□□□ 0.5
COL6A2-202ENST00000310645 ABCA6Q8N139 1617 aa18.19■□□□□ 0.5
COL6A2-202ENST00000310645 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
COL6A2-202ENST00000310645 FOXD4L5Q5VV16 416 aaPredicted RBP18.19■□□□□ 0.5
COL6A2-202ENST00000310645 FOXD4L4Q8WXT5 416 aaPredicted RBP18.19■□□□□ 0.5
COL6A2-202ENST00000310645 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.18■□□□□ 0.5
COL6A2-202ENST00000310645 PKP1Q13835 747 aa18.18■□□□□ 0.5
COL6A2-202ENST00000310645 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
COL6A2-202ENST00000310645 CD109Q6YHK3 1445 aa18.18■□□□□ 0.5
COL6A2-202ENST00000310645 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
COL6A2-202ENST00000310645 RBM27Q9P2N5 1060 aaKnown RBP18.17■□□□□ 0.5
COL6A2-202ENST00000310645 CHAMP1Q96JM3 812 aa18.17■□□□□ 0.5
COL6A2-202ENST00000310645 STK26Q9P289 416 aa18.16■□□□□ 0.5
COL6A2-202ENST00000310645 PRPF40AO75400 957 aaKnown RBP18.16■□□□□ 0.5
COL6A2-202ENST00000310645 SRPK2P78362 688 aaKnown RBP18.16■□□□□ 0.5
COL6A2-202ENST00000310645 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
COL6A2-202ENST00000310645 MAP3K4Q9Y6R4 1608 aa18.16■□□□□ 0.5
COL6A2-202ENST00000310645 APBB1O00213 710 aa18.16■□□□□ 0.5
COL6A2-202ENST00000310645 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
COL6A2-202ENST00000310645 CDC45O75419 566 aa18.14■□□□□ 0.5
COL6A2-202ENST00000310645 PRIM1P49642 420 aaKnown RBP18.14■□□□□ 0.5
COL6A2-202ENST00000310645 GCC1Q96CN9 775 aa18.14■□□□□ 0.5
COL6A2-202ENST00000310645 EVC2Q86UK5 1308 aa18.14■□□□□ 0.5
COL6A2-202ENST00000310645 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
COL6A2-202ENST00000310645 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
COL6A2-202ENST00000310645 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
COL6A2-202ENST00000310645 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
COL6A2-202ENST00000310645 ABCC11Q96J66 1382 aa18.13■□□□□ 0.49
COL6A2-202ENST00000310645 FBLN1P23142 703 aa18.13■□□□□ 0.49
COL6A2-202ENST00000310645 SIRT2Q8IXJ6 389 aa18.12■□□□□ 0.49
COL6A2-202ENST00000310645 RNF214Q8ND24 703 aa18.12■□□□□ 0.49
COL6A2-202ENST00000310645 UQCRHLA0A096LP55 91 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
COL6A2-202ENST00000310645 UQCRHP07919 91 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 LMBRD1Q9NUN5 540 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 C16orf71Q8IYS4 520 aaPredicted RBP18.11■□□□□ 0.49
COL6A2-202ENST00000310645 ZGPATQ8N5A5 531 aaKnown RBP18.11■□□□□ 0.49
COL6A2-202ENST00000310645 NUCB2P80303 420 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 GGT6Q6P531 493 aa18.11■□□□□ 0.49
COL6A2-202ENST00000310645 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
COL6A2-202ENST00000310645 ABCC1P33527 1531 aa18.1■□□□□ 0.49
COL6A2-202ENST00000310645 MYOM2P54296 1465 aa18.1■□□□□ 0.49
COL6A2-202ENST00000310645 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
COL6A2-202ENST00000310645 GSPT1P15170 499 aaKnown RBP18.1■□□□□ 0.49
COL6A2-202ENST00000310645 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
COL6A2-202ENST00000310645 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 HMOX1P09601 288 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 PRKAR2BP31323 418 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 ZNF445P59923 1031 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 RABEP1Q15276 862 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 MPNDQ8N594 471 aa18.09■□□□□ 0.49
COL6A2-202ENST00000310645 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.49
COL6A2-202ENST00000310645 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.49
COL6A2-202ENST00000310645 IL16Q14005 1332 aa18.08■□□□□ 0.49
COL6A2-202ENST00000310645 SYCE3A1L190 88 aa18.08■□□□□ 0.48
COL6A2-202ENST00000310645 TET3O43151 1660 aa18.08■□□□□ 0.48
COL6A2-202ENST00000310645 NOL7Q9UMY1 257 aaKnown RBP18.08■□□□□ 0.48
COL6A2-202ENST00000310645 TPRNQ4KMQ1 711 aa18.07■□□□□ 0.48
COL6A2-202ENST00000310645 FOXD4L6Q3SYB3 417 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 FOXD4L3Q6VB84 417 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 GPT2Q8TD30 523 aa18.06■□□□□ 0.48
COL6A2-202ENST00000310645 FYB1O15117 783 aa18.06■□□□□ 0.48
COL6A2-202ENST00000310645 PTMAP06454 111 aaKnown RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
COL6A2-202ENST00000310645 PLEKHM2Q8IWE5 1019 aa18.06■□□□□ 0.48
COL6A2-202ENST00000310645 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 OTUD7AQ8TE49 926 aaPredicted RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.06■□□□□ 0.48
COL6A2-202ENST00000310645 VAMP4O75379 141 aa18.05■□□□□ 0.48
COL6A2-202ENST00000310645 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
COL6A2-202ENST00000310645 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
COL6A2-202ENST00000310645 CHMP4BQ9H444 224 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms