RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 NOP58Q9Y2X3 529 aaKnown RBP3.84□□□□□ -1.8
CLOCK-201ENST00000309964 PRXQ9BXM0 1461 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 MSH6P52701 1360 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 EIF2AK4Q9P2K8 1649 aaKnown RBP3.84□□□□□ -1.8
CLOCK-201ENST00000309964 EIF4G3O43432 1585 aaKnown RBP3.84□□□□□ -1.8
CLOCK-201ENST00000309964 RIPK4P57078 832 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 RTEL1-TNFRSF6BF6WH68 1400 aa3.84□□□□□ -1.8
CLOCK-201ENST00000309964 NSD2O96028 1365 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 UBTFL1P0CB47 393 aaPredicted RBP3.83□□□□□ -1.8
CLOCK-201ENST00000309964 KANK4Q5T7N3 995 aaPredicted RBP3.83□□□□□ -1.8
CLOCK-201ENST00000309964 TOM1L2Q6ZVM7 507 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 CDKL5O76039 1030 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 EPS15P42566 896 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 NGLY1Q96IV0 654 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 AKAP2Q9Y2D5 859 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 BICRAQ9NZM4 1560 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 RAPGEF6Q8TEU7 1601 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 PRKCSHP14314 528 aaPredicted RBP3.83□□□□□ -1.8
CLOCK-201ENST00000309964 PTPN23Q9H3S7 1636 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 LRRCC1Q9C099 1032 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 LETM1O95202 739 aaPredicted RBP3.83□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC57Q2TAC2 916 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 PBRM1Q86U86 1689 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 KIF1BO60333 1816 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 NBR1Q14596 966 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 MPHOSPH8Q99549 860 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 MYO5CQ9NQX4 1742 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 CTNNA3Q9UI47 895 aa3.83□□□□□ -1.8
CLOCK-201ENST00000309964 DZIP1LQ8IYY4 767 aaKnown RBP3.82□□□□□ -1.8
CLOCK-201ENST00000309964 DUOX2Q9NRD8 1548 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 ZNF710Q8N1W2 664 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 NUTM2FA1L443 756 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 CABP4P57796 275 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 NKTRP30414 1462 aaKnown RBP3.82□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC196A0A1B0GTZ2 297 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 TRIM22Q8IYM9 498 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 ZPR1O75312 459 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 CT47A1Q5JQC4 288 aaPredicted RBP3.82□□□□□ -1.8
CLOCK-201ENST00000309964 ANKRD45Q5TZF3 282 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 GCC1Q96CN9 775 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 A0A087WZG4 1122 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 MTHFSP49914 203 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 KRT32Q14532 448 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 RILPL2Q969X0 211 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 TTC21BQ7Z4L5 1316 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 TNIP1Q15025 636 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 WASHC4Q2M389 1173 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 NFXL1Q6ZNB6 911 aa3.82□□□□□ -1.8
CLOCK-201ENST00000309964 SYCP1Q15431 976 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 ZRSR2Q15696 482 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 RAB34Q9BZG1 259 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 AFAP1Q8N556 730 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 RPRD2Q5VT52 1461 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 FCHSD2O94868 740 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 GNAI2P04899 355 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 STIM1Q13586 685 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 FAM161AQ3B820 660 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 PRKRIP1Q9H875 184 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 BMP2KQ9NSY1 1161 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CCP110O43303 1012 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 IKQ13123 557 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 WDR63Q8IWG1 891 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 DNAJC2Q99543 621 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 DACH1Q9UI36 760 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 NPHP3Q7Z494 1330 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 PES1O00541 588 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 SMC2O95347 1197 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 IGHMBP2P38935 993 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CERS3Q8IU89 383 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 WASF1Q92558 559 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 B4DLN1 442 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 EIF2S2P20042 333 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 MRPL12P52815 198 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 PDE3AQ14432 1141 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC146Q8IYE0 955 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 ACBD3Q9H3P7 528 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 ZGPATQ8N5A5 531 aaKnown RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CDK19Q9BWU1 502 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CNNM1Q9NRU3 951 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 SOS1Q07889 1333 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 MYO1BO43795 1136 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CAVIN4Q5BKX8 364 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 ANKRD18AQ8IVF6 992 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CAGE1Q8TC20 777 aa3.81□□□□□ -1.8
CLOCK-201ENST00000309964 CDCA7Q9BWT1 371 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-201ENST00000309964 PPP1R12BO60237 982 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-201ENST00000309964 OFD1O75665 1012 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 KIF20AO95235 890 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 ERBINQ96RT1 1412 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 ABCC11Q96J66 1382 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 APBB1O00213 710 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 B4GALNT3Q6L9W6 998 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 OLFM4Q6UX06 510 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 CDK5RAP3Q96JB5 506 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 EHMT1Q9H9B1 1298 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 TAOK2Q9UL54 1235 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 ABCC10Q5T3U5 1492 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 PUS7Q96PZ0 661 aaKnown RBP3.8□□□□□ -1.8
CLOCK-201ENST00000309964 PYM1Q9BRP8 204 aaKnown RBP3.8□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC73Q6ZRK6 1079 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms