RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 DNAAF4Q8WXU2 420 aa22.83■■□□□ 1.25
BPTF-201ENST00000306378 NOL10Q9BSC4 688 aaKnown RBP22.83■■□□□ 1.25
BPTF-201ENST00000306378 RNF214Q8ND24 703 aa22.83■■□□□ 1.25
BPTF-201ENST00000306378 IFIT2P09913 472 aaKnown RBP22.83■■□□□ 1.24
BPTF-201ENST00000306378 CCDC83Q8IWF9 413 aa22.83■■□□□ 1.24
BPTF-201ENST00000306378 RALYLQ86SE5 291 aaKnown RBP22.82■■□□□ 1.24
BPTF-201ENST00000306378 KRT222Q8N1A0 295 aa22.82■■□□□ 1.24
BPTF-201ENST00000306378 CFAP45Q9UL16 551 aa22.82■■□□□ 1.24
BPTF-201ENST00000306378 SMTNL1A8MU46 457 aa22.81■■□□□ 1.24
BPTF-201ENST00000306378 GPATCH11Q8N954 259 aa22.81■■□□□ 1.24
BPTF-201ENST00000306378 CEP63Q96MT8 703 aa22.81■■□□□ 1.24
BPTF-201ENST00000306378 GCOM1H8Y6P7 765 aaPredicted RBP22.81■■□□□ 1.24
BPTF-201ENST00000306378 SERPINC1P01008 464 aa22.81■■□□□ 1.24
BPTF-201ENST00000306378 MYZAPP0CAP1 466 aa22.81■■□□□ 1.24
BPTF-201ENST00000306378 SFPQP23246 707 aaKnown RBP eCLIP22.81■■□□□ 1.24
BPTF-201ENST00000306378 SART3Q15020 963 aaKnown RBP22.81■■□□□ 1.24
BPTF-201ENST00000306378 KRT85P78386 507 aa22.8■■□□□ 1.24
BPTF-201ENST00000306378 TUBB4AP04350 444 aa22.8■■□□□ 1.24
BPTF-201ENST00000306378 MAP2K1Q02750 393 aaPredicted RBP22.79■■□□□ 1.24
BPTF-201ENST00000306378 PTPN14Q15678 1187 aa22.79■■□□□ 1.24
BPTF-201ENST00000306378 CCDC175P0C221 793 aa22.79■■□□□ 1.24
BPTF-201ENST00000306378 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
BPTF-201ENST00000306378 BBXQ8WY36 941 aaPredicted RBP22.79■■□□□ 1.24
BPTF-201ENST00000306378 PRDM2Q13029 1718 aa22.79■■□□□ 1.24
BPTF-201ENST00000306378 CCAR1Q8IX12 1150 aaKnown RBP22.79■■□□□ 1.24
BPTF-201ENST00000306378 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
BPTF-201ENST00000306378 ARHGAP29Q52LW3 1261 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 JAKMIP3Q5VZ66 844 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 ANKS4BQ8N8V4 417 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 NUP155O75694 1391 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 CNTROBQ8N137 903 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 TMCO5BA8MYB1 307 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 PKD2Q13563 968 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 NFXL1Q6ZNB6 911 aa22.78■■□□□ 1.24
BPTF-201ENST00000306378 CCDC7Q96M83 1385 aa22.77■■□□□ 1.24
BPTF-201ENST00000306378 C6orf163Q5TEZ5 329 aa22.77■■□□□ 1.24
BPTF-201ENST00000306378 SH3BGRP55822 239 aaPredicted RBP22.77■■□□□ 1.24
BPTF-201ENST00000306378 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.77■■□□□ 1.24
BPTF-201ENST00000306378 V9GYY5 206 aaPredicted RBP22.77■■□□□ 1.24
BPTF-201ENST00000306378 GSDMDP57764 484 aa22.77■■□□□ 1.24
BPTF-201ENST00000306378 PAIP2Q9BPZ3 127 aaKnown RBP22.77■■□□□ 1.24
BPTF-201ENST00000306378 MPHOSPH9Q99550 1183 aa22.77■■□□□ 1.23
BPTF-201ENST00000306378 DDX12PQ92771 950 aa22.76■■□□□ 1.23
BPTF-201ENST00000306378 KIF5CO60282 957 aa22.76■■□□□ 1.23
BPTF-201ENST00000306378 ANKRD18BA2A2Z9 1011 aa22.75■■□□□ 1.23
BPTF-201ENST00000306378 HSPA4P34932 840 aa22.75■■□□□ 1.23
BPTF-201ENST00000306378 ERC1Q8IUD2 1116 aa22.75■■□□□ 1.23
BPTF-201ENST00000306378 SPC24Q8NBT2 197 aa22.75■■□□□ 1.23
BPTF-201ENST00000306378 DESP17661 470 aa22.74■■□□□ 1.23
BPTF-201ENST00000306378 BMS1Q14692 1282 aaKnown RBP22.74■■□□□ 1.23
BPTF-201ENST00000306378 ZNF397Q8NF99 534 aaPredicted RBP22.74■■□□□ 1.23
BPTF-201ENST00000306378 K7ELQ4 463 aaPredicted RBP22.74■■□□□ 1.23
BPTF-201ENST00000306378 EPB41L2O43491 1005 aaKnown RBP22.74■■□□□ 1.23
BPTF-201ENST00000306378 EHBP1Q8NDI1 1231 aa22.74■■□□□ 1.23
BPTF-201ENST00000306378 TAX1BP1Q86VP1 789 aa22.73■■□□□ 1.23
BPTF-201ENST00000306378 C9orf78Q9NZ63 289 aaPredicted RBP22.73■■□□□ 1.23
BPTF-201ENST00000306378 KIF20AO95235 890 aa22.73■■□□□ 1.23
BPTF-201ENST00000306378 PRPF40AO75400 957 aaKnown RBP22.73■■□□□ 1.23
BPTF-201ENST00000306378 BACH2Q9BYV9 841 aa22.73■■□□□ 1.23
BPTF-201ENST00000306378 TDO2P48775 406 aa22.73■■□□□ 1.23
BPTF-201ENST00000306378 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
BPTF-201ENST00000306378 HS1BP3Q53T59 392 aa22.72■■□□□ 1.23
BPTF-201ENST00000306378 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
BPTF-201ENST00000306378 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
BPTF-201ENST00000306378 LRRFIP2Q9Y608 721 aaKnown RBP22.71■■□□□ 1.23
BPTF-201ENST00000306378 COG6Q9Y2V7 657 aa22.71■■□□□ 1.23
BPTF-201ENST00000306378 MCM4P33991 863 aa22.71■■□□□ 1.23
BPTF-201ENST00000306378 ZFYVE27Q5T4F4 411 aa22.71■■□□□ 1.23
BPTF-201ENST00000306378 PPP4R3BQ5MIZ7 849 aa22.7■■□□□ 1.22
BPTF-201ENST00000306378 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
BPTF-201ENST00000306378 TICAM2Q86XR7 235 aa22.7■■□□□ 1.22
BPTF-201ENST00000306378 CDKL5O76039 1030 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 TAOK3Q9H2K8 898 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 DAAM2Q86T65 1068 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 CASQ1P31415 396 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 MAP3K11Q16584 847 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 DNAJC21Q5F1R6 531 aaKnown RBP22.69■■□□□ 1.22
BPTF-201ENST00000306378 IPO4Q8TEX9 1081 aaKnown RBP22.69■■□□□ 1.22
BPTF-201ENST00000306378 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
BPTF-201ENST00000306378 DDX58O95786 925 aaKnown RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 NAA15Q9BXJ9 866 aaKnown RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 LIG1P18858 919 aa22.68■■□□□ 1.22
BPTF-201ENST00000306378 RSRC1Q96IZ7 334 aaKnown RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 HMGB1P1B2RPK0 211 aaPredicted RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 CLGNO14967 610 aa22.68■■□□□ 1.22
BPTF-201ENST00000306378 CCDC94Q9BW85 323 aaPredicted RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 NSRP1Q9H0G5 558 aaKnown RBP22.68■■□□□ 1.22
BPTF-201ENST00000306378 STK38Q15208 465 aa22.68■■□□□ 1.22
BPTF-201ENST00000306378 CCDC183Q5T5S1 534 aa22.68■■□□□ 1.22
BPTF-201ENST00000306378 A0A1B0GUA9 196 aa22.67■■□□□ 1.22
BPTF-201ENST00000306378 DDX46Q7L014 1031 aaKnown RBP22.67■■□□□ 1.22
BPTF-201ENST00000306378 GCC1Q96CN9 775 aa22.67■■□□□ 1.22
BPTF-201ENST00000306378 FAM193AP78312 1265 aa22.67■■□□□ 1.22
BPTF-201ENST00000306378 TAF4BQ92750 862 aa22.67■■□□□ 1.22
BPTF-201ENST00000306378 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
BPTF-201ENST00000306378 G3BP1Q13283 466 aaKnown RBP eCLIP22.67■■□□□ 1.225e-6■■□□□ 11.9
BPTF-201ENST00000306378 CDK5RAP3Q96JB5 506 aa22.67■■□□□ 1.22
BPTF-201ENST00000306378 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
BPTF-201ENST00000306378 TRIM34Q9BYJ4 488 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 NUP62CLQ9H1M0 184 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms