RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 PLEKHF1Q96S99 279 aa24.11■■□□□ 1.45
RNF139-201ENST00000303545 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
RNF139-201ENST00000303545 ZRANB1Q9UGI0 708 aa24.1■■□□□ 1.45
RNF139-201ENST00000303545 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
RNF139-201ENST00000303545 TMPOP42166 694 aaKnown RBP24.09■■□□□ 1.45
RNF139-201ENST00000303545 KIF13AQ9H1H9 1805 aa24.09■■□□□ 1.45
RNF139-201ENST00000303545 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
RNF139-201ENST00000303545 PDE3AQ14432 1141 aa24.09■■□□□ 1.45
RNF139-201ENST00000303545 CCDC27Q2M243 656 aa24.09■■□□□ 1.45
RNF139-201ENST00000303545 COL3A1P02461 1466 aaPredicted RBP24.08■■□□□ 1.45
RNF139-201ENST00000303545 MYH16Q9H6N6 1097 aa24.07■■□□□ 1.44
RNF139-201ENST00000303545 TRIM35Q9UPQ4 493 aa24.07■■□□□ 1.44
RNF139-201ENST00000303545 RIPK4P57078 832 aa24.05■■□□□ 1.44
RNF139-201ENST00000303545 SETD1AO15047 1707 aaKnown RBP24.05■■□□□ 1.44
RNF139-201ENST00000303545 EXOSC9Q06265 439 aaKnown RBP24.05■■□□□ 1.44
RNF139-201ENST00000303545 NME9Q86XW9 330 aa24.05■■□□□ 1.44
RNF139-201ENST00000303545 ANKRD26Q9UPS8 1709 aa24.05■■□□□ 1.44
RNF139-201ENST00000303545 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
RNF139-201ENST00000303545 HMOX1P09601 288 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 POLKQ9UBT6 870 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 KIF20BQ96Q89 1820 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 EMILIN1Q9Y6C2 1016 aa24.03■■□□□ 1.44
RNF139-201ENST00000303545 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
RNF139-201ENST00000303545 CEBPAP49715 358 aaPredicted RBP24.01■■□□□ 1.43
RNF139-201ENST00000303545 PPIP5K1Q6PFW1 1433 aa24.01■■□□□ 1.43
RNF139-201ENST00000303545 C8orf34Q49A92 452 aa24.01■■□□□ 1.43
RNF139-201ENST00000303545 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
RNF139-201ENST00000303545 NUDT16Q96DE0 195 aaKnown RBP24■■□□□ 1.43
RNF139-201ENST00000303545 PCDHB15Q9Y5E8 787 aa24■■□□□ 1.43
RNF139-201ENST00000303545 PRKAR2BP31323 418 aa23.99■■□□□ 1.43
RNF139-201ENST00000303545 FAM161AQ3B820 660 aa23.99■■□□□ 1.43
RNF139-201ENST00000303545 LAS1LQ9Y4W2 734 aaKnown RBP23.99■■□□□ 1.43
RNF139-201ENST00000303545 DLC1Q96QB1 1528 aa23.99■■□□□ 1.43
RNF139-201ENST00000303545 MED14O60244 1454 aa23.99■■□□□ 1.43
RNF139-201ENST00000303545 SMC4Q9NTJ3 1288 aa23.98■■□□□ 1.43
RNF139-201ENST00000303545 TNRQ92752 1358 aa23.98■■□□□ 1.43
RNF139-201ENST00000303545 SLC4A3P48751 1232 aa23.97■■□□□ 1.43
RNF139-201ENST00000303545 RRS1Q15050 365 aaKnown RBP23.97■■□□□ 1.43
RNF139-201ENST00000303545 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
RNF139-201ENST00000303545 THUMPD2Q9BTF0 503 aaKnown RBP23.96■■□□□ 1.43
RNF139-201ENST00000303545 PHACTR3Q96KR7 559 aa23.96■■□□□ 1.43
RNF139-201ENST00000303545 PNPLA6Q8IY17 1366 aa23.95■■□□□ 1.42
RNF139-201ENST00000303545 FTSJ3Q8IY81 847 aaKnown RBP23.95■■□□□ 1.42
RNF139-201ENST00000303545 SSH1Q8WYL5 1049 aa23.95■■□□□ 1.42
RNF139-201ENST00000303545 ATP7BP35670 1465 aa23.94■■□□□ 1.42
RNF139-201ENST00000303545 RSPH6AQ9H0K4 717 aa23.93■■□□□ 1.42
RNF139-201ENST00000303545 ZKSCAN2Q63HK3 967 aa23.93■■□□□ 1.42
RNF139-201ENST00000303545 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
RNF139-201ENST00000303545 LTKP29376 864 aa23.92■■□□□ 1.42
RNF139-201ENST00000303545 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
RNF139-201ENST00000303545 PRR36Q9H6K5 1346 aa23.91■■□□□ 1.42
RNF139-201ENST00000303545 FCHSD2O94868 740 aa23.91■■□□□ 1.42
RNF139-201ENST00000303545 DZIP1LQ8IYY4 767 aaKnown RBP23.91■■□□□ 1.42
RNF139-201ENST00000303545 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
RNF139-201ENST00000303545 CPS1P31327 1500 aa23.9■■□□□ 1.42
RNF139-201ENST00000303545 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
RNF139-201ENST00000303545 ROBO2Q9HCK4 1378 aa23.9■■□□□ 1.42
RNF139-201ENST00000303545 TMEM2Q9UHN6 1383 aa23.9■■□□□ 1.42
RNF139-201ENST00000303545 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
RNF139-201ENST00000303545 NOB1Q9ULX3 412 aaKnown RBP23.9■■□□□ 1.42
RNF139-201ENST00000303545 TRIM27P14373 513 aa23.89■■□□□ 1.42
RNF139-201ENST00000303545 MVPQ14764 893 aaKnown RBP23.89■■□□□ 1.42
RNF139-201ENST00000303545 COG3Q96JB2 828 aa23.89■■□□□ 1.41
RNF139-201ENST00000303545 EDC4Q6P2E9 1401 aaKnown RBP23.88■■□□□ 1.41
RNF139-201ENST00000303545 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
RNF139-201ENST00000303545 NEFMP07197 916 aa23.88■■□□□ 1.41
RNF139-201ENST00000303545 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
RNF139-201ENST00000303545 SOX12O15370 315 aa23.87■■□□□ 1.41
RNF139-201ENST00000303545 PNNQ9H307 717 aaKnown RBP23.87■■□□□ 1.41
RNF139-201ENST00000303545 PMFBP1Q8TBY8 1022 aa23.86■■□□□ 1.41
RNF139-201ENST00000303545 IL13P35225 146 aa23.86■■□□□ 1.41
RNF139-201ENST00000303545 UBR1Q8IWV7 1749 aa23.86■■□□□ 1.41
RNF139-201ENST00000303545 ELL2O00472 640 aaPredicted RBP23.85■■□□□ 1.41
RNF139-201ENST00000303545 PDZRN3Q9UPQ7 1066 aa23.85■■□□□ 1.41
RNF139-201ENST00000303545 SEC24BO95487 1268 aa23.84■■□□□ 1.41
RNF139-201ENST00000303545 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
RNF139-201ENST00000303545 IL16Q14005 1332 aa23.83■■□□□ 1.4
RNF139-201ENST00000303545 NFE2L2Q16236 605 aa23.82■■□□□ 1.4
RNF139-201ENST00000303545 ATF7IPQ6VMQ6 1270 aa23.82■■□□□ 1.4
RNF139-201ENST00000303545 ADAMTS13Q76LX8 1427 aa23.82■■□□□ 1.4
RNF139-201ENST00000303545 DDRGK1Q96HY6 314 aa23.82■■□□□ 1.4
RNF139-201ENST00000303545 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
RNF139-201ENST00000303545 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
RNF139-201ENST00000303545 TMEM57Q8N5G2 664 aa23.81■■□□□ 1.4
RNF139-201ENST00000303545 CT47B1P0C2W7 299 aaPredicted RBP23.81■■□□□ 1.4
RNF139-201ENST00000303545 RWDD1Q9H446 243 aaPredicted RBP23.81■■□□□ 1.4
RNF139-201ENST00000303545 DCTN1Q14203 1278 aa23.8■■□□□ 1.4
RNF139-201ENST00000303545 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
RNF139-201ENST00000303545 DEKP35659 375 aaKnown RBP23.79■■□□□ 1.4
RNF139-201ENST00000303545 ACEP12821 1306 aa23.79■■□□□ 1.4
RNF139-201ENST00000303545 RTL5Q5HYW3 569 aaPredicted RBP23.79■■□□□ 1.4
RNF139-201ENST00000303545 TECPR2O15040 1411 aa23.78■■□□□ 1.4
RNF139-201ENST00000303545 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.78■■□□□ 1.4
RNF139-201ENST00000303545 KNDC1Q76NI1 1749 aa23.78■■□□□ 1.4
RNF139-201ENST00000303545 AEBP1Q8IUX7 1158 aa23.78■■□□□ 1.4
RNF139-201ENST00000303545 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
RNF139-201ENST00000303545 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
RNF139-201ENST00000303545 MON2Q7Z3U7 1717 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms