RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZNF710Q8N1W2 664 aa17.86■□□□□ 0.45
CDT1-201ENST00000301019 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
CDT1-201ENST00000301019 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
CDT1-201ENST00000301019 PLXNC1O60486 1568 aa17.86■□□□□ 0.45
CDT1-201ENST00000301019 WWC1Q8IX03 1113 aa17.85■□□□□ 0.45
CDT1-201ENST00000301019 ZBTB9Q96C00 473 aa17.85■□□□□ 0.45
CDT1-201ENST00000301019 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
CDT1-201ENST00000301019 TMEM51Q9NW97 253 aa17.85■□□□□ 0.45
CDT1-201ENST00000301019 ISY1Q9ULR0 285 aaKnown RBP17.85■□□□□ 0.45
CDT1-201ENST00000301019 RTEL1-TNFRSF6BF6WH68 1400 aa17.84■□□□□ 0.45
CDT1-201ENST00000301019 TESK2Q96S53 571 aa17.84■□□□□ 0.45
CDT1-201ENST00000301019 GLI2P10070 1586 aa17.84■□□□□ 0.45
CDT1-201ENST00000301019 PZPP20742 1482 aa17.83■□□□□ 0.45
CDT1-201ENST00000301019 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
CDT1-201ENST00000301019 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
CDT1-201ENST00000301019 APBB1O00213 710 aa17.83■□□□□ 0.44
CDT1-201ENST00000301019 KLHL40Q2TBA0 621 aa17.82■□□□□ 0.44
CDT1-201ENST00000301019 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
CDT1-201ENST00000301019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.82■□□□□ 0.443e-9■■□□□ 12.9
CDT1-201ENST00000301019 ZFYVE16Q7Z3T8 1539 aa17.82■□□□□ 0.44
CDT1-201ENST00000301019 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
CDT1-201ENST00000301019 GDPD2Q9HCC8 539 aa17.81■□□□□ 0.44
CDT1-201ENST00000301019 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
CDT1-201ENST00000301019 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
CDT1-201ENST00000301019 DTNBO60941 627 aa17.81■□□□□ 0.44
CDT1-201ENST00000301019 DUOX2Q9NRD8 1548 aa17.81■□□□□ 0.44
CDT1-201ENST00000301019 NEO1Q92859 1461 aa17.81■□□□□ 0.44
CDT1-201ENST00000301019 ZGPATQ8N5A5 531 aaKnown RBP17.81■□□□□ 0.44
CDT1-201ENST00000301019 ZNF500O60304 480 aaPredicted RBP17.8■□□□□ 0.44
CDT1-201ENST00000301019 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
CDT1-201ENST00000301019 SMC5Q8IY18 1101 aa17.8■□□□□ 0.44
CDT1-201ENST00000301019 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
CDT1-201ENST00000301019 ZNF518AQ6AHZ1 1483 aa17.8■□□□□ 0.44
CDT1-201ENST00000301019 ERICH4A6NGS2 130 aa17.79■□□□□ 0.44
CDT1-201ENST00000301019 ATP7AQ04656 1500 aa17.79■□□□□ 0.44
CDT1-201ENST00000301019 GPT2Q8TD30 523 aa17.79■□□□□ 0.44
CDT1-201ENST00000301019 TMEM63CQ9P1W3 806 aa17.79■□□□□ 0.44
CDT1-201ENST00000301019 TRMT2AQ8IZ69 625 aaKnown RBP17.78■□□□□ 0.44
CDT1-201ENST00000301019 DDIT3P35638 169 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 KCNJ4P48050 445 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 KIAA2012Q0VF49 1180 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 CSPP1Q1MSJ5 1256 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
CDT1-201ENST00000301019 INO80Q9ULG1 1556 aaPredicted RBP17.78■□□□□ 0.44
CDT1-201ENST00000301019 POLR1AO95602 1720 aaPredicted RBP17.77■□□□□ 0.44
CDT1-201ENST00000301019 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 MTERF4Q7Z6M4 381 aaKnown RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 PDCL2Q8N4E4 241 aa17.76■□□□□ 0.43
CDT1-201ENST00000301019 TCP11L2Q8N4U5 519 aa17.76■□□□□ 0.43
CDT1-201ENST00000301019 ZFP91Q96JP5 570 aaPredicted RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 RALGAPBQ86X10 1494 aa17.76■□□□□ 0.43
CDT1-201ENST00000301019 DZIP1LQ8IYY4 767 aaKnown RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 USP25Q9UHP3 1055 aa17.76■□□□□ 0.43
CDT1-201ENST00000301019 KDM5DQ9BY66 1539 aa17.76■□□□□ 0.43
CDT1-201ENST00000301019 MVPQ14764 893 aaKnown RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 PHF23Q9BUL5 403 aaPredicted RBP17.76■□□□□ 0.43
CDT1-201ENST00000301019 KIF2CQ99661 725 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 BCL2L12Q9HB09 334 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 LMBRD1Q9NUN5 540 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 KCNA4P22459 653 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 CCDC39Q9UFE4 941 aa17.75■□□□□ 0.43
CDT1-201ENST00000301019 UTP14CQ5TAP6 766 aaKnown RBP17.74■□□□□ 0.43
CDT1-201ENST00000301019 NAA30Q147X3 362 aaPredicted RBP17.74■□□□□ 0.43
CDT1-201ENST00000301019 SPC24Q8NBT2 197 aa17.73■□□□□ 0.43
CDT1-201ENST00000301019 KIF3AQ9Y496 699 aa17.73■□□□□ 0.43
CDT1-201ENST00000301019 TERF1P54274 439 aa17.73■□□□□ 0.43
CDT1-201ENST00000301019 MYRIPQ8NFW9 859 aa17.73■□□□□ 0.43
CDT1-201ENST00000301019 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
CDT1-201ENST00000301019 UNC13BO14795 1591 aa17.71■□□□□ 0.43
CDT1-201ENST00000301019 TBC1D9Q6ZT07 1266 aa17.71■□□□□ 0.43
CDT1-201ENST00000301019 FAM135AQ9P2D6 1515 aa17.71■□□□□ 0.43
CDT1-201ENST00000301019 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
CDT1-201ENST00000301019 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.42
CDT1-201ENST00000301019 TRIM27P14373 513 aa17.7■□□□□ 0.42
CDT1-201ENST00000301019 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
CDT1-201ENST00000301019 TMEM57Q8N5G2 664 aa17.7■□□□□ 0.42
CDT1-201ENST00000301019 CIZ1Q9ULV3 898 aaPredicted RBP17.7■□□□□ 0.42
CDT1-201ENST00000301019 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
CDT1-201ENST00000301019 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
CDT1-201ENST00000301019 NPHP1O15259 732 aa17.69■□□□□ 0.42
CDT1-201ENST00000301019 ZNF445P59923 1031 aa17.69■□□□□ 0.42
CDT1-201ENST00000301019 NOB1Q9ULX3 412 aaKnown RBP17.69■□□□□ 0.42
CDT1-201ENST00000301019 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
CDT1-201ENST00000301019 MAGI2Q86UL8 1455 aa17.68■□□□□ 0.42
CDT1-201ENST00000301019 TSPOAP1O95153 1857 aa17.68■□□□□ 0.42
CDT1-201ENST00000301019 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
CDT1-201ENST00000301019 SNX21Q969T3 373 aa17.68■□□□□ 0.42
CDT1-201ENST00000301019 GTPBP4Q9BZE4 634 aaKnown RBP17.68■□□□□ 0.42
CDT1-201ENST00000301019 HECW2Q9P2P5 1572 aa17.68■□□□□ 0.42
CDT1-201ENST00000301019 KIF16BQ96L93 1317 aa17.67■□□□□ 0.42
CDT1-201ENST00000301019 KIF3BO15066 747 aa17.67■□□□□ 0.42
CDT1-201ENST00000301019 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
CDT1-201ENST00000301019 KIF20AO95235 890 aa17.67■□□□□ 0.42
CDT1-201ENST00000301019 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDT1-201ENST00000301019 V9GYY5 206 aaPredicted RBP17.67■□□□□ 0.42
CDT1-201ENST00000301019 PPRC1Q5VV67 1664 aaKnown RBP17.67■□□□□ 0.42
CDT1-201ENST00000301019 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
CDT1-201ENST00000301019 IPO4Q8TEX9 1081 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms