RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 TAF7LQ5H9L4 462 aa10.42□□□□□ -0.74
SNRPD1-201ENST00000300413 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
SNRPD1-201ENST00000300413 NPC1L1Q9UHC9 1359 aa10.42□□□□□ -0.74
SNRPD1-201ENST00000300413 UGGT1Q9NYU2 1555 aa10.42□□□□□ -0.74
SNRPD1-201ENST00000300413 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
SNRPD1-201ENST00000300413 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 CCDC30Q5VVM6 783 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 FOXO3O43524 673 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 SLC4A10Q6U841 1118 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 TESK2Q96S53 571 aa10.41□□□□□ -0.74
SNRPD1-201ENST00000300413 NFE2L2Q16236 605 aa10.4□□□□□ -0.74
SNRPD1-201ENST00000300413 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
SNRPD1-201ENST00000300413 KIF1BO60333 1816 aa10.4□□□□□ -0.74
SNRPD1-201ENST00000300413 GTF2E1P29083 439 aaPredicted RBP10.4□□□□□ -0.74
SNRPD1-201ENST00000300413 INO80Q9ULG1 1556 aaPredicted RBP10.4□□□□□ -0.74
SNRPD1-201ENST00000300413 NME9Q86XW9 330 aa10.4□□□□□ -0.75
SNRPD1-201ENST00000300413 DIP2BQ9P265 1576 aa10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 PIK3C2GO75747 1445 aa10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 RGS3P49796 1198 aa10.39□□□□□ -0.75
SNRPD1-201ENST00000300413 PIP4K2BP78356 416 aa10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 HSP90AB4PQ58FF6 505 aa10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 C11orf95C9JLR9 678 aaPredicted RBP10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 NPHP4O75161 1426 aaPredicted RBP10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 RRS1Q15050 365 aaKnown RBP10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 CENPQQ7L2Z9 268 aaPredicted RBP10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 KDM5CP41229 1560 aa10.38□□□□□ -0.75
SNRPD1-201ENST00000300413 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 B4GALNT3Q6L9W6 998 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 CABP4P57796 275 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 DIP2CQ9Y2E4 1556 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 GNAT3A8MTJ3 354 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 KCNJ4P48050 445 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 FKBP5Q13451 457 aaPredicted RBP10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 A2ML1A8K2U0 1454 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 ARHGEF40Q8TER5 1519 aa10.37□□□□□ -0.75
SNRPD1-201ENST00000300413 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 GORABQ5T7V8 394 aa10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 WWC1Q8IX03 1113 aa10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 C9orf78Q9NZ63 289 aaPredicted RBP10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 ZC3H13Q5T200 1668 aaKnown RBP10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 FAM135BQ49AJ0 1406 aa10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 ELL2O00472 640 aaPredicted RBP10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 ZC3H6P61129 1189 aaKnown RBP10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 KIAA1211Q6ZU35 1233 aa10.36□□□□□ -0.75
SNRPD1-201ENST00000300413 ZMYM4Q5VZL5 1548 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 NUTM2BA6NNL0 878 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 NUTM2EB1AL46 878 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 NUTM2AQ8IVF1 878 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 CHMP3Q9Y3E7 222 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 POLR3AO14802 1390 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 HSPA2P54652 639 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 TMPOP42166 694 aaKnown RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 XPCQ01831 940 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 LRRC59Q96AG4 307 aaKnown RBP10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 SYNMO15061 1565 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 GNAI3P08754 354 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 PDE3AQ14432 1141 aa10.35□□□□□ -0.75
SNRPD1-201ENST00000300413 PLEKHG3A1L390 1219 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 FYB1O15117 783 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 ARHGEF10O15013 1369 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 FLT4P35916 1363 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 PARD3Q8TEW0 1356 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 IFT57Q9NWB7 429 aa10.34□□□□□ -0.75
SNRPD1-201ENST00000300413 LRRIQ1Q96JM4 1722 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 IL16Q14005 1332 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 GOLGA6L22H0YM25 854 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 RNF17Q9BXT8 1623 aaKnown RBP10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 LTKP29376 864 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 KIF6Q6ZMV9 814 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
SNRPD1-201ENST00000300413 ADGRB3O60242 1522 aa10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 HTATSF1O43719 755 aaKnown RBP10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 SPHKAPQ2M3C7 1700 aa10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 PLA2R1Q13018 1463 aa10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 A0A1W2PP64 1363 aa10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 ANP32BQ92688 251 aaKnown RBP10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 EMILIN1Q9Y6C2 1016 aa10.32□□□□□ -0.76
SNRPD1-201ENST00000300413 HDGFL1Q5TGJ6 251 aa10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 CCT4P50991 539 aaKnown RBP10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 FGD1P98174 961 aa10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 EXOSC9Q06265 439 aaKnown RBP10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 BCL2L13Q9BXK5 485 aa10.31□□□□□ -0.76
SNRPD1-201ENST00000300413 KDM5AP29375 1690 aaKnown RBP10.3□□□□□ -0.76
SNRPD1-201ENST00000300413 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms