RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 VPS37CA5D8V6 355 aaPredicted RBP16.3■□□□□ 0.2
CASC4-201ENST00000299957 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
CASC4-201ENST00000299957 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
CASC4-201ENST00000299957 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
CASC4-201ENST00000299957 ESPNB1AK53 854 aa16.29■□□□□ 0.2
CASC4-201ENST00000299957 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
CASC4-201ENST00000299957 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
CASC4-201ENST00000299957 TSPYL6Q8N831 410 aa16.28■□□□□ 0.2
CASC4-201ENST00000299957 NOS1P29475 1434 aa16.28■□□□□ 0.2
CASC4-201ENST00000299957 AIMP1Q12904 312 aaKnown RBP16.28■□□□□ 0.2
CASC4-201ENST00000299957 GDPD2Q9HCC8 539 aa16.28■□□□□ 0.2
CASC4-201ENST00000299957 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
CASC4-201ENST00000299957 FAM69CQ0P6D2 419 aa16.27■□□□□ 0.19
CASC4-201ENST00000299957 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.19
CASC4-201ENST00000299957 SURF6O75683 361 aaKnown RBP16.27■□□□□ 0.19
CASC4-201ENST00000299957 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.19
CASC4-201ENST00000299957 WDR62O43379 1518 aa16.26■□□□□ 0.19
CASC4-201ENST00000299957 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
CASC4-201ENST00000299957 TBC1D9Q6ZT07 1266 aa16.26■□□□□ 0.19
CASC4-201ENST00000299957 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
CASC4-201ENST00000299957 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
CASC4-201ENST00000299957 NLRP6P59044 892 aa16.25■□□□□ 0.19
CASC4-201ENST00000299957 FIBPO43427 364 aa16.25■□□□□ 0.19
CASC4-201ENST00000299957 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
CASC4-201ENST00000299957 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
CASC4-201ENST00000299957 NUCB2P80303 420 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 SCAF11Q99590 1463 aaKnown RBP16.24■□□□□ 0.19
CASC4-201ENST00000299957 PHACTR3Q96KR7 559 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 DIAPH3Q9NSV4 1193 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
CASC4-201ENST00000299957 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
CASC4-201ENST00000299957 FYB1O15117 783 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
CASC4-201ENST00000299957 A2MP01023 1474 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 ATAD2Q6PL18 1390 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 PTMSP20962 102 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 CHAF1AQ13111 956 aaPredicted RBP16.23■□□□□ 0.19
CASC4-201ENST00000299957 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 TEFQ10587 303 aa16.23■□□□□ 0.19
CASC4-201ENST00000299957 DISP1Q96F81 1524 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 NFE2L2Q16236 605 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 SYCE3A1L190 88 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 AAMPQ13685 434 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 RRAGDQ9NQL2 400 aaPredicted RBP16.22■□□□□ 0.19
CASC4-201ENST00000299957 RAPGEF6Q8TEU7 1601 aa16.22■□□□□ 0.19
CASC4-201ENST00000299957 KIF14Q15058 1648 aa16.21■□□□□ 0.19
CASC4-201ENST00000299957 FCHSD2O94868 740 aa16.21■□□□□ 0.19
CASC4-201ENST00000299957 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
CASC4-201ENST00000299957 KDM4AO75164 1064 aa16.2■□□□□ 0.18
CASC4-201ENST00000299957 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
CASC4-201ENST00000299957 C8orf58Q8NAV2 365 aa16.2■□□□□ 0.18
CASC4-201ENST00000299957 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
CASC4-201ENST00000299957 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
CASC4-201ENST00000299957 UBTFL1P0CB47 393 aaPredicted RBP16.19■□□□□ 0.18
CASC4-201ENST00000299957 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
CASC4-201ENST00000299957 RABEP1Q15276 862 aa16.19■□□□□ 0.18
CASC4-201ENST00000299957 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
CASC4-201ENST00000299957 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
CASC4-201ENST00000299957 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
CASC4-201ENST00000299957 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
CASC4-201ENST00000299957 OTUD7AQ8TE49 926 aaPredicted RBP16.18■□□□□ 0.18
CASC4-201ENST00000299957 USHBP1Q8N6Y0 703 aa16.18■□□□□ 0.18
CASC4-201ENST00000299957 GAS2L2Q8NHY3 880 aa16.18■□□□□ 0.18
CASC4-201ENST00000299957 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
CASC4-201ENST00000299957 SIL1Q9H173 461 aa16.17■□□□□ 0.18
CASC4-201ENST00000299957 CEBPZQ03701 1054 aaKnown RBP16.17■□□□□ 0.18
CASC4-201ENST00000299957 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
CASC4-201ENST00000299957 ANXA1P04083 346 aa16.16■□□□□ 0.18
CASC4-201ENST00000299957 MEIS3Q99687 375 aa16.16■□□□□ 0.18
CASC4-201ENST00000299957 IFIT2P09913 472 aaKnown RBP16.16■□□□□ 0.18
CASC4-201ENST00000299957 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
CASC4-201ENST00000299957 COL17A1Q9UMD9 1497 aaPredicted RBP16.16■□□□□ 0.18
CASC4-201ENST00000299957 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
CASC4-201ENST00000299957 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
CASC4-201ENST00000299957 ERC2O15083 957 aa16.15■□□□□ 0.18
CASC4-201ENST00000299957 PPFIA3O75145 1194 aa16.15■□□□□ 0.18
CASC4-201ENST00000299957 STK3Q13188 491 aa16.15■□□□□ 0.18
CASC4-201ENST00000299957 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
CASC4-201ENST00000299957 DNMT1P26358 1616 aaKnown RBP16.15■□□□□ 0.18
CASC4-201ENST00000299957 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
CASC4-201ENST00000299957 UHRF1BP1Q6BDS2 1440 aa16.15■□□□□ 0.18
CASC4-201ENST00000299957 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.17
CASC4-201ENST00000299957 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
CASC4-201ENST00000299957 GNAI2P04899 355 aa16.14■□□□□ 0.17
CASC4-201ENST00000299957 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
CASC4-201ENST00000299957 ZGPATQ8N5A5 531 aaKnown RBP16.13■□□□□ 0.17
CASC4-201ENST00000299957 NUCB1Q02818 461 aa16.13■□□□□ 0.17
CASC4-201ENST00000299957 GORABQ5T7V8 394 aa16.13■□□□□ 0.17
CASC4-201ENST00000299957 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
CASC4-201ENST00000299957 KIAA0556O60303 1618 aa16.13■□□□□ 0.17
CASC4-201ENST00000299957 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
CASC4-201ENST00000299957 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
CASC4-201ENST00000299957 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
CASC4-201ENST00000299957 H3BQV1 296 aa16.12■□□□□ 0.17
CASC4-201ENST00000299957 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
CASC4-201ENST00000299957 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms