RNA–Protein interactions for RNA: ENST00000298355.7

TRIM9-201, Transcript of tripartite motif containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM9, Length 5,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-201ENST00000298355 PDCP20941 246 aa20.46■□□□□ 0.87
TRIM9-201ENST00000298355 TMCO3Q6UWJ1 677 aa20.46■□□□□ 0.87
TRIM9-201ENST00000298355 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.86
TRIM9-201ENST00000298355 USP8P40818 1118 aa20.45■□□□□ 0.86
TRIM9-201ENST00000298355 IPO7O95373 1038 aaKnown RBP20.45■□□□□ 0.86
TRIM9-201ENST00000298355 NKTRP30414 1462 aaKnown RBP20.45■□□□□ 0.86
TRIM9-201ENST00000298355 NAIPQ13075 1403 aa20.45■□□□□ 0.86
TRIM9-201ENST00000298355 UBXN4Q92575 508 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 TSR2Q969E8 191 aaKnown RBP20.44■□□□□ 0.86
TRIM9-201ENST00000298355 KINO60870 393 aaKnown RBP20.44■□□□□ 0.86
TRIM9-201ENST00000298355 PTPN14Q15678 1187 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 CCDC183Q5T5S1 534 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 PDILTQ8N807 584 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 NESP48681 1621 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 TNNT1P13805 278 aa20.44■□□□□ 0.86
TRIM9-201ENST00000298355 MTHFSP49914 203 aa20.43■□□□□ 0.86
TRIM9-201ENST00000298355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRIM9-201ENST00000298355 EIF3JO75822 258 aaKnown RBP20.43■□□□□ 0.86
TRIM9-201ENST00000298355 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRIM9-201ENST00000298355 KIF2AO00139 706 aaPredicted RBP20.43■□□□□ 0.86
TRIM9-201ENST00000298355 TERF1P54274 439 aa20.43■□□□□ 0.86
TRIM9-201ENST00000298355 KIF20AO95235 890 aa20.43■□□□□ 0.86
TRIM9-201ENST00000298355 EVC2Q86UK5 1308 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 LRSAM1Q6UWE0 723 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 ADCY5O95622 1261 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 NUP62CLQ9H1M0 184 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 HOOK1Q9UJC3 728 aaKnown RBP20.42■□□□□ 0.86
TRIM9-201ENST00000298355 KIAA1107Q9UPP5 1409 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 WWC1Q8IX03 1113 aa20.42■□□□□ 0.86
TRIM9-201ENST00000298355 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
TRIM9-201ENST00000298355 GTF2F1P35269 517 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRIM9-201ENST00000298355 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
TRIM9-201ENST00000298355 KRT85P78386 507 aa20.41■□□□□ 0.86
TRIM9-201ENST00000298355 UVSSAQ2YD98 709 aa20.41■□□□□ 0.86
TRIM9-201ENST00000298355 ANKRD50Q9ULJ7 1429 aa20.41■□□□□ 0.86
TRIM9-201ENST00000298355 NOL10Q9BSC4 688 aaKnown RBP20.41■□□□□ 0.86
TRIM9-201ENST00000298355 SKIDA1Q1XH10 827 aa20.41■□□□□ 0.86
TRIM9-201ENST00000298355 MLECQ14165 292 aa20.4■□□□□ 0.86
TRIM9-201ENST00000298355 KRT222Q8N1A0 295 aa20.4■□□□□ 0.86
TRIM9-201ENST00000298355 KIF18AQ8NI77 898 aa20.4■□□□□ 0.86
TRIM9-201ENST00000298355 C16orf45Q96MC5 204 aaPredicted RBP20.4■□□□□ 0.86
TRIM9-201ENST00000298355 ERLIN1O75477 346 aa20.4■□□□□ 0.86
TRIM9-201ENST00000298355 FILIP1Q7Z7B0 1213 aa20.4■□□□□ 0.86
TRIM9-201ENST00000298355 RARSP54136 660 aaKnown RBP20.4■□□□□ 0.86
TRIM9-201ENST00000298355 TOPBP1Q92547 1522 aa20.39■□□□□ 0.86
TRIM9-201ENST00000298355 RASSF8Q8NHQ8 419 aa20.39■□□□□ 0.86
TRIM9-201ENST00000298355 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.86
TRIM9-201ENST00000298355 GRIN2BQ13224 1484 aa20.39■□□□□ 0.85
TRIM9-201ENST00000298355 ANKRD20A12PQ8NF67 263 aa20.39■□□□□ 0.85
TRIM9-201ENST00000298355 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
TRIM9-201ENST00000298355 OLFM4Q6UX06 510 aa20.38■□□□□ 0.85
TRIM9-201ENST00000298355 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
TRIM9-201ENST00000298355 PSMA5P28066 241 aa20.38■□□□□ 0.85
TRIM9-201ENST00000298355 FOSBP53539 338 aa20.38■□□□□ 0.85
TRIM9-201ENST00000298355 AXDND1Q5T1B0 1012 aaPredicted RBP20.38■□□□□ 0.85
TRIM9-201ENST00000298355 IRX3P78415 501 aaPredicted RBP20.37■□□□□ 0.85
TRIM9-201ENST00000298355 STAC3Q96MF2 364 aa20.37■□□□□ 0.85
TRIM9-201ENST00000298355 POLA1P09884 1462 aaPredicted RBP20.36■□□□□ 0.85
TRIM9-201ENST00000298355 POLR3GO15318 223 aaPredicted RBP20.36■□□□□ 0.85
TRIM9-201ENST00000298355 HSP90AB3PQ58FF7 597 aa20.36■□□□□ 0.85
TRIM9-201ENST00000298355 NOL7Q9UMY1 257 aaKnown RBP20.36■□□□□ 0.85
TRIM9-201ENST00000298355 HDGFP51858 240 aaKnown RBP20.35■□□□□ 0.85
TRIM9-201ENST00000298355 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
TRIM9-201ENST00000298355 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
TRIM9-201ENST00000298355 BMS1Q14692 1282 aaKnown RBP20.35■□□□□ 0.85
TRIM9-201ENST00000298355 ZNF830Q96NB3 372 aaPredicted RBP20.35■□□□□ 0.85
TRIM9-201ENST00000298355 ERBINQ96RT1 1412 aa20.35■□□□□ 0.85
TRIM9-201ENST00000298355 KIAA0754O94854 1291 aa20.35■□□□□ 0.85
TRIM9-201ENST00000298355 TMEM57Q8N5G2 664 aa20.35■□□□□ 0.85
TRIM9-201ENST00000298355 IGSF3O75054 1194 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 PAXBP1Q9Y5B6 917 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 CDR1P51861 262 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 SNX21Q969T3 373 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 CPLX1O14810 134 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 RNF123Q5XPI4 1314 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 CPLX2Q6PUV4 134 aaKnown RBP20.34■□□□□ 0.85
TRIM9-201ENST00000298355 SCAPERQ9BY12 1400 aa20.34■□□□□ 0.85
TRIM9-201ENST00000298355 RBM25P49756 843 aaKnown RBP20.33■□□□□ 0.85
TRIM9-201ENST00000298355 RAB3GAP1Q15042 981 aa20.33■□□□□ 0.85
TRIM9-201ENST00000298355 PRIM1P49642 420 aaKnown RBP20.33■□□□□ 0.84
TRIM9-201ENST00000298355 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.84
TRIM9-201ENST00000298355 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.84
TRIM9-201ENST00000298355 FAM177A1Q8N128 213 aaPredicted RBP20.33■□□□□ 0.84
TRIM9-201ENST00000298355 PLCD3Q8N3E9 789 aa20.33■□□□□ 0.84
TRIM9-201ENST00000298355 GPATCH11Q8N954 259 aa20.32■□□□□ 0.84
TRIM9-201ENST00000298355 FEZ1Q99689 392 aa20.32■□□□□ 0.84
TRIM9-201ENST00000298355 LARP1BQ659C4 914 aaKnown RBP20.32■□□□□ 0.84
TRIM9-201ENST00000298355 SEC24BO95487 1268 aa20.32■□□□□ 0.84
TRIM9-201ENST00000298355 TRIM29Q14134 588 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 CAGE1Q8TC20 777 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 TTLL5Q6EMB2 1281 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 SPATA32Q96LK8 384 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 DHX29Q7Z478 1369 aaKnown RBP20.31■□□□□ 0.84
TRIM9-201ENST00000298355 CCDC102AQ96A19 550 aa20.31■□□□□ 0.84
TRIM9-201ENST00000298355 SMC5Q8IY18 1101 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 CCDC191Q8NCU4 936 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 OGFRQ9NZT2 677 aa20.3■□□□□ 0.84
TRIM9-201ENST00000298355 GTF2A1P52655 376 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms