RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 AMPHP49418 695 aa17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 RBM33Q96EV2 1170 aaKnown RBP17.13■□□□□ 0.33
PPP1CB-201ENST00000296122 NLRP6P59044 892 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 PSME1Q06323 249 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
PPP1CB-201ENST00000296122 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
PPP1CB-201ENST00000296122 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
PPP1CB-201ENST00000296122 NPHP4O75161 1426 aaPredicted RBP17.1■□□□□ 0.33
PPP1CB-201ENST00000296122 B4GALNT3Q6L9W6 998 aa17.1■□□□□ 0.33
PPP1CB-201ENST00000296122 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
PPP1CB-201ENST00000296122 CPS1P31327 1500 aa17.1■□□□□ 0.33
PPP1CB-201ENST00000296122 PTCH1Q13635 1447 aa17.09■□□□□ 0.33
PPP1CB-201ENST00000296122 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
PPP1CB-201ENST00000296122 TTC21AQ8NDW8 1320 aa17.09■□□□□ 0.33
PPP1CB-201ENST00000296122 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
PPP1CB-201ENST00000296122 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
PPP1CB-201ENST00000296122 PTPRUQ92729 1446 aa17.08■□□□□ 0.33
PPP1CB-201ENST00000296122 HMOX1P09601 288 aa17.08■□□□□ 0.33
PPP1CB-201ENST00000296122 ATF3P18847 181 aa17.08■□□□□ 0.33
PPP1CB-201ENST00000296122 FBLN1P23142 703 aa17.08■□□□□ 0.33
PPP1CB-201ENST00000296122 WWC1Q8IX03 1113 aa17.08■□□□□ 0.33
PPP1CB-201ENST00000296122 FCHSD2O94868 740 aa17.08■□□□□ 0.32
PPP1CB-201ENST00000296122 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
PPP1CB-201ENST00000296122 RIPK4P57078 832 aa17.08■□□□□ 0.32
PPP1CB-201ENST00000296122 CALD1Q05682 793 aaKnown RBP17.08■□□□□ 0.32
PPP1CB-201ENST00000296122 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
PPP1CB-201ENST00000296122 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
PPP1CB-201ENST00000296122 PRKAR2BP31323 418 aa17.07■□□□□ 0.32
PPP1CB-201ENST00000296122 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
PPP1CB-201ENST00000296122 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
PPP1CB-201ENST00000296122 MED14O60244 1454 aa17.06■□□□□ 0.32
PPP1CB-201ENST00000296122 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
PPP1CB-201ENST00000296122 LMOD3Q0VAK6 560 aa17.05■□□□□ 0.32
PPP1CB-201ENST00000296122 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
PPP1CB-201ENST00000296122 USP32Q8NFA0 1604 aa17.04■□□□□ 0.32
PPP1CB-201ENST00000296122 DUSP27Q5VZP5 1158 aa17.04■□□□□ 0.32
PPP1CB-201ENST00000296122 CD163L1Q9NR16 1453 aa17.03■□□□□ 0.32
PPP1CB-201ENST00000296122 PLIN1O60240 522 aa17.03■□□□□ 0.32
PPP1CB-201ENST00000296122 TMPOP42166 694 aaKnown RBP17.03■□□□□ 0.32
PPP1CB-201ENST00000296122 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
PPP1CB-201ENST00000296122 HSPA2P54652 639 aa17.03■□□□□ 0.32
PPP1CB-201ENST00000296122 USP6P35125 1406 aa17.01■□□□□ 0.31
PPP1CB-201ENST00000296122 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
PPP1CB-201ENST00000296122 CDC42BPGQ6DT37 1551 aa17■□□□□ 0.31
PPP1CB-201ENST00000296122 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
PPP1CB-201ENST00000296122 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
PPP1CB-201ENST00000296122 LTV1Q96GA3 475 aaPredicted RBP17■□□□□ 0.31
PPP1CB-201ENST00000296122 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
PPP1CB-201ENST00000296122 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
PPP1CB-201ENST00000296122 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
PPP1CB-201ENST00000296122 SULT6B1Q6IMI4 303 aa16.99■□□□□ 0.31
PPP1CB-201ENST00000296122 C19orf44Q9H6X5 657 aa16.99■□□□□ 0.31
PPP1CB-201ENST00000296122 FOXO3O43524 673 aa16.98■□□□□ 0.31
PPP1CB-201ENST00000296122 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
PPP1CB-201ENST00000296122 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
PPP1CB-201ENST00000296122 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
PPP1CB-201ENST00000296122 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
PPP1CB-201ENST00000296122 NFE2L2Q16236 605 aa16.96■□□□□ 0.31
PPP1CB-201ENST00000296122 MS4A1P11836 297 aa16.96■□□□□ 0.31
PPP1CB-201ENST00000296122 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
PPP1CB-201ENST00000296122 XPCQ01831 940 aaPredicted RBP16.95■□□□□ 0.3
PPP1CB-201ENST00000296122 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
PPP1CB-201ENST00000296122 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
PPP1CB-201ENST00000296122 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
PPP1CB-201ENST00000296122 IL13P35225 146 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 HSP90AB2PQ58FF8 381 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 CRBNQ96SW2 442 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 HAP1P54257 671 aaPredicted RBP16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
PPP1CB-201ENST00000296122 GNAI1P63096 354 aa16.93■□□□□ 0.3
PPP1CB-201ENST00000296122 EIF4A2Q14240 407 aaKnown RBP16.93■□□□□ 0.3
PPP1CB-201ENST00000296122 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
PPP1CB-201ENST00000296122 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
PPP1CB-201ENST00000296122 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 ADGRB2O60241 1585 aa16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 FLT4P35916 1363 aa16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 TSR2Q969E8 191 aaKnown RBP16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 BCL2L13Q9BXK5 485 aa16.92■□□□□ 0.3
PPP1CB-201ENST00000296122 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 ORAI2Q96SN7 254 aa16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 BCAR3O75815 825 aa16.91■□□□□ 0.3
PPP1CB-201ENST00000296122 ITSN1Q15811 1721 aa16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 MSH6P52701 1360 aa16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 IPO8O15397 1037 aaKnown RBP16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 PLEKHF1Q96S99 279 aa16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
PPP1CB-201ENST00000296122 IL16Q14005 1332 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms