RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 ZRANB1Q9UGI0 708 aa32.37■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 MYBBP1AQ9BQG0 1328 aaKnown RBP32.36■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 TNNT2P45379 298 aaPredicted RBP32.35■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 TTC21BQ7Z4L5 1316 aa32.34■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 SSH2Q76I76 1423 aa32.34■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 MORC1Q86VD1 984 aa32.33■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 FOXO3O43524 673 aa32.33■■■□□ 2.77
TNFSF12-TNFSF13-201ENST00000293826 SCAF1Q9H7N4 1312 aaKnown RBP32.32■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 XPCQ01831 940 aaPredicted RBP32.31■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 ANKRD26Q9UPS8 1709 aa32.31■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 NSD2O96028 1365 aa32.31■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 PPP2R1AP30153 589 aa32.3■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 DDX17Q92841 729 aaKnown RBP32.3■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 MRS2Q9HD23 443 aa32.28■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 KIF1AQ12756 1690 aa32.27■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 SLAIN2Q9P270 581 aa32.27■■■□□ 2.76
TNFSF12-TNFSF13-201ENST00000293826 PSME1Q06323 249 aa32.26■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 PAK3O75914 559 aaPredicted RBP32.24■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 FBLN1P23142 703 aa32.24■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 PIK3C2AO00443 1686 aa32.24■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 BRINP3Q76B58 766 aa32.23■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 NLRP13Q86W25 1043 aa32.23■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 NUTM2GQ5VZR2 741 aa32.21■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 TTC21AQ8NDW8 1320 aa32.2■■■□□ 2.75
TNFSF12-TNFSF13-201ENST00000293826 BRD4O60885 1362 aaPredicted RBP32.19■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 KRT28Q7Z3Y7 464 aa32.19■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 COG3Q96JB2 828 aa32.18■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 TRPM3Q9HCF6 1732 aaPredicted RBP32.18■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 OVOS2A0A0J9YW53 1432 aa32.17■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 OVOS2Q6IE36 1432 aa32.17■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 MARF1Q9Y4F3 1742 aaKnown RBP32.15■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 ABTB2Q8N961 1025 aa32.14■■■□□ 2.74
TNFSF12-TNFSF13-201ENST00000293826 SOX12O15370 315 aa32.12■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 MTHFSP49914 203 aa32.12■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 NLRP6P59044 892 aa32.12■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 FAM9BQ8IZU0 186 aa32.12■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 NPHP3Q7Z494 1330 aa32.11■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 PXDNQ92626 1479 aa32.1■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 USP31Q70CQ4 1352 aa32.1■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 MAP2P11137 1827 aaKnown RBP32.08■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 PLEKHG5O94827 1062 aa32.08■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 LMOD2Q6P5Q4 547 aa32.08■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 PNISRQ8TF01 805 aaKnown RBP32.07■■■□□ 2.73
TNFSF12-TNFSF13-201ENST00000293826 RRS1Q15050 365 aaKnown RBP32.07■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 ROBO1Q9Y6N7 1651 aa32.06■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 POLKQ9UBT6 870 aa32.05■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 EMILIN1Q9Y6C2 1016 aa32.05■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 ALS2Q96Q42 1657 aa32.05■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 USP54Q70EL1 1684 aa32.05■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 PPM1GO15355 546 aaPredicted RBP32.03■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 NHSL1Q5SYE7 1610 aa32.02■■■□□ 2.72
TNFSF12-TNFSF13-201ENST00000293826 AATKQ6ZMQ8 1374 aa32.01■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 SBNO1A3KN83 1393 aa32■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 SOS2Q07890 1332 aaPredicted RBP31.99■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 TNS3Q68CZ2 1445 aa31.98■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 PIP4K2BP78356 416 aa31.97■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 SPATA31A3Q5VYP0 1347 aa31.97■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 SHPRHQ149N8 1683 aa31.96■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 CERKQ8TCT0 537 aa31.96■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 GTF3C3Q9Y5Q9 886 aa31.96■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 PEAK1Q9H792 1746 aa31.95■■■□□ 2.71
TNFSF12-TNFSF13-201ENST00000293826 COL3A1P02461 1466 aaPredicted RBP31.95■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 SMG6Q86US8 1419 aaKnown RBP31.94■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 MED1Q15648 1581 aaPredicted RBP31.94■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 UBAP1LF5GYI3 381 aa31.93■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 TOM1O60784 492 aa31.93■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 SENP3-EIF4A1A0A087X0R7 540 aa31.93■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 MAP3K19Q56UN5 1328 aa31.93■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 HNRNPUQ00839 825 aaKnown RBP eCLIP31.92■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 NFAT5O94916 1531 aa31.92■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 CFAP53Q96M91 514 aa31.91■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 ADAMTS8Q9UP79 889 aa31.91■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 USP19O94966 1318 aa31.91■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 PNPLA6Q8IY17 1366 aa31.91■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 SLIT3O75094 1523 aa31.9■■■□□ 2.7
TNFSF12-TNFSF13-201ENST00000293826 CDK12Q9NYV4 1490 aaPredicted RBP31.88■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 GCP02774 474 aa31.88■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 AHDC1Q5TGY3 1603 aaPredicted RBP31.88■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 IQSEC2Q5JU85 1478 aa31.87■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 WDR43Q15061 677 aaKnown RBP eCLIP31.87■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 LTN1O94822 1766 aa31.87■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 CRYBG1Q9Y4K1 1723 aa31.86■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 PHRF1Q9P1Y6 1649 aaKnown RBP31.85■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 ARHGEF10O15013 1369 aa31.85■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 ZBTB7CA1YPR0 619 aa31.84■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 HSP90AB2PQ58FF8 381 aa31.84■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 INSRP06213 1382 aa31.83■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 KCNH5Q8NCM2 988 aa31.83■■■□□ 2.69
TNFSF12-TNFSF13-201ENST00000293826 DIAPH1O60610 1272 aaKnown RBP31.82■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 AMPHP49418 695 aa31.82■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 PHLPP1O60346 1717 aa31.81■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 U2SURPO15042 1029 aaKnown RBP31.79■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 ZC3H6P61129 1189 aaKnown RBP31.79■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 FLT4P35916 1363 aa31.78■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 HOXC9P31274 260 aa31.78■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 IL13P35225 146 aa31.78■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 CCDC146Q8IYE0 955 aa31.78■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 COL16A1Q07092 1604 aaPredicted RBP31.77■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 U2AF1L5P0DN76 240 aaPredicted RBP31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms