RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
SYNGAP1-201ENST00000293748 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
SYNGAP1-201ENST00000293748 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
SYNGAP1-201ENST00000293748 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-201ENST00000293748 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-201ENST00000293748 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
SYNGAP1-201ENST00000293748 ZBTB7CA1YPR0 619 aa15.13■□□□□ 0.01
SYNGAP1-201ENST00000293748 ANKARQ7Z5J8 1434 aa15.12■□□□□ 0.01
SYNGAP1-201ENST00000293748 MS4A1P11836 297 aa15.12■□□□□ 0.01
SYNGAP1-201ENST00000293748 BRINP3Q76B58 766 aa15.12■□□□□ 0.01
SYNGAP1-201ENST00000293748 CHMP4BQ9H444 224 aaKnown RBP15.12■□□□□ 0.01
SYNGAP1-201ENST00000293748 ORAI2Q96SN7 254 aa15.11■□□□□ 0.01
SYNGAP1-201ENST00000293748 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
SYNGAP1-201ENST00000293748 HSPA1LP34931 641 aa15.1■□□□□ 0.01
SYNGAP1-201ENST00000293748 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
SYNGAP1-201ENST00000293748 NLRP13Q86W25 1043 aa15.1■□□□□ 0.01
SYNGAP1-201ENST00000293748 XPCQ01831 940 aaPredicted RBP15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 CABP1Q9NZU7 370 aa15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 C1orf167Q5SNV9 1468 aa15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 HSP90AB1P08238 724 aaKnown RBP15.09■□□□□ 0.01
SYNGAP1-201ENST00000293748 JCADQ9P266 1359 aa15.08■□□□□ 0
SYNGAP1-201ENST00000293748 ABTB2Q8N961 1025 aa15.08■□□□□ 0
SYNGAP1-201ENST00000293748 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
SYNGAP1-201ENST00000293748 SENP3-EIF4A1A0A087X0R7 540 aa15.07■□□□□ 0
SYNGAP1-201ENST00000293748 ARHGEF10O15013 1369 aa15.07■□□□□ 0
SYNGAP1-201ENST00000293748 IFT172Q9UG01 1749 aa15.07■□□□□ 0
SYNGAP1-201ENST00000293748 SBNO2Q9Y2G9 1366 aa15.06■□□□□ 0
SYNGAP1-201ENST00000293748 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
SYNGAP1-201ENST00000293748 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
SYNGAP1-201ENST00000293748 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
SYNGAP1-201ENST00000293748 ACEP12821 1306 aa15.06■□□□□ 0
SYNGAP1-201ENST00000293748 HSCBQ8IWL3 235 aa15.05■□□□□ 0
SYNGAP1-201ENST00000293748 XRN1Q8IZH2 1706 aaKnown RBP15.05■□□□□ 0
SYNGAP1-201ENST00000293748 PPIP5K1Q6PFW1 1433 aa15.05■□□□□ -0
SYNGAP1-201ENST00000293748 NLRP6P59044 892 aa15.05■□□□□ -0
SYNGAP1-201ENST00000293748 MST1RQ04912 1400 aa15.05■□□□□ -0
SYNGAP1-201ENST00000293748 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ -0
SYNGAP1-201ENST00000293748 KTN1Q86UP2 1357 aaKnown RBP15.05■□□□□ -0
SYNGAP1-201ENST00000293748 MSNP26038 577 aaKnown RBP15.04■□□□□ -0
SYNGAP1-201ENST00000293748 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -0
SYNGAP1-201ENST00000293748 ADGRB1O14514 1584 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 CDC42BPGQ6DT37 1551 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 NRDCO43847 1150 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 NGLY1Q96IV0 654 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 COG3Q96JB2 828 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 SPATA31A6Q5VVP1 1343 aa15.04■□□□□ -0
SYNGAP1-201ENST00000293748 A0A0G2JS52 829 aa15.03■□□□□ -0
SYNGAP1-201ENST00000293748 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
SYNGAP1-201ENST00000293748 CHAF1AQ13111 956 aaPredicted RBP15.03■□□□□ -0
SYNGAP1-201ENST00000293748 NUDCQ9Y266 331 aa15.03■□□□□ -0
SYNGAP1-201ENST00000293748 FRAT1Q92837 279 aaPredicted RBP15.03■□□□□ -0
SYNGAP1-201ENST00000293748 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
SYNGAP1-201ENST00000293748 TULP4Q9NRJ4 1543 aa15.02■□□□□ -0
SYNGAP1-201ENST00000293748 ASXL1Q8IXJ9 1541 aa15.02□□□□□ -0.01
SYNGAP1-201ENST00000293748 GOLGA6L6A8MZA4 724 aa15.02□□□□□ -0.01
SYNGAP1-201ENST00000293748 ADAMTS2O95450 1211 aa15.02□□□□□ -0.01
SYNGAP1-201ENST00000293748 TTC21AQ8NDW8 1320 aa15.02□□□□□ -0.01
SYNGAP1-201ENST00000293748 EVA1CP58658 441 aa15.02□□□□□ -0.01
SYNGAP1-201ENST00000293748 TCERG1O14776 1098 aaKnown RBP15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 TRPM1Q7Z4N2 1603 aa15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 SOX12O15370 315 aa15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 KCNH5Q8NCM2 988 aa15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 PRDM11Q9NQV5 511 aa15.01□□□□□ -0.01
SYNGAP1-201ENST00000293748 KNDC1Q76NI1 1749 aa15□□□□□ -0.01
SYNGAP1-201ENST00000293748 CSB-PGBD3P0DP91 1061 aa15□□□□□ -0.01
SYNGAP1-201ENST00000293748 NEUROD2Q15784 382 aa15□□□□□ -0.01
SYNGAP1-201ENST00000293748 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
SYNGAP1-201ENST00000293748 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
SYNGAP1-201ENST00000293748 SLC12A5Q9H2X9 1139 aa14.99□□□□□ -0.01
SYNGAP1-201ENST00000293748 PNNQ9H307 717 aaKnown RBP14.99□□□□□ -0.01
SYNGAP1-201ENST00000293748 NUTM2GQ5VZR2 741 aa14.98□□□□□ -0.01
SYNGAP1-201ENST00000293748 DDX17Q92841 729 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-201ENST00000293748 PTMSP20962 102 aa14.98□□□□□ -0.01
SYNGAP1-201ENST00000293748 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
SYNGAP1-201ENST00000293748 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
SYNGAP1-201ENST00000293748 C8orf37Q96NL8 207 aa14.97□□□□□ -0.01
SYNGAP1-201ENST00000293748 ZNF772Q68DY9 489 aaPredicted RBP14.97□□□□□ -0.01
SYNGAP1-201ENST00000293748 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.97□□□□□ -0.01
SYNGAP1-201ENST00000293748 AMPHP49418 695 aa14.96□□□□□ -0.02
SYNGAP1-201ENST00000293748 SOS2Q07890 1332 aaPredicted RBP14.96□□□□□ -0.02
SYNGAP1-201ENST00000293748 SPATA31A3Q5VYP0 1347 aa14.96□□□□□ -0.02
SYNGAP1-201ENST00000293748 PRR36Q9H6K5 1346 aa14.95□□□□□ -0.02
SYNGAP1-201ENST00000293748 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
SYNGAP1-201ENST00000293748 IPO9Q96P70 1041 aaKnown RBP14.95□□□□□ -0.02
SYNGAP1-201ENST00000293748 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
SYNGAP1-201ENST00000293748 TTC21BQ7Z4L5 1316 aa14.94□□□□□ -0.02
SYNGAP1-201ENST00000293748 TESK2Q96S53 571 aa14.94□□□□□ -0.02
SYNGAP1-201ENST00000293748 TNS3Q68CZ2 1445 aa14.94□□□□□ -0.02
SYNGAP1-201ENST00000293748 GBP4Q96PP9 640 aa14.93□□□□□ -0.02
SYNGAP1-201ENST00000293748 TPRNQ4KMQ1 711 aa14.93□□□□□ -0.02
SYNGAP1-201ENST00000293748 CC2D1BQ5T0F9 858 aaKnown RBP14.92□□□□□ -0.02
SYNGAP1-201ENST00000293748 PANK3Q9H999 370 aa14.92□□□□□ -0.02
SYNGAP1-201ENST00000293748 KIF1AQ12756 1690 aa14.92□□□□□ -0.02
SYNGAP1-201ENST00000293748 ANKRD36BQ8N2N9 1353 aa14.92□□□□□ -0.02
SYNGAP1-201ENST00000293748 GOLGA6L4A6NEF3 574 aa14.92□□□□□ -0.02
SYNGAP1-201ENST00000293748 QRICH2Q9H0J4 1663 aa14.91□□□□□ -0.02
SYNGAP1-201ENST00000293748 ADGRB2O60241 1585 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms