RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 HDGFL2Q7Z4V5 671 aaPredicted RBP25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 WAPLQ7Z5K2 1190 aa25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 NEFMP07197 916 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 MLECQ14165 292 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 MED14O60244 1454 aa25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 FBLN1P23142 703 aa25.62■■□□□ 1.69
SCUBE1-201ENST00000290460 A2ML1A8K2U0 1454 aa25.62■■□□□ 1.69
SCUBE1-201ENST00000290460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.61■■□□□ 1.69
SCUBE1-201ENST00000290460 EXOSC9Q06265 439 aaKnown RBP25.61■■□□□ 1.69
SCUBE1-201ENST00000290460 DIAPH1O60610 1272 aaKnown RBP25.59■■□□□ 1.69
SCUBE1-201ENST00000290460 PMFBP1Q8TBY8 1022 aa25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 AGLP35573 1532 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 RIPK4P57078 832 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 ZKSCAN2Q63HK3 967 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SMC4Q9NTJ3 1288 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 DAXXQ9UER7 740 aaPredicted RBP25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 PNPLA6Q8IY17 1366 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 MVPQ14764 893 aaKnown RBP25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SEC24BO95487 1268 aa25.55■■□□□ 1.68
SCUBE1-201ENST00000290460 FTSJ3Q8IY81 847 aaKnown RBP25.55■■□□□ 1.68
SCUBE1-201ENST00000290460 AAMPQ13685 434 aa25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 DZIP1LQ8IYY4 767 aaKnown RBP25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 MAP2P11137 1827 aaKnown RBP25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
SCUBE1-201ENST00000290460 DLC1Q96QB1 1528 aa25.53■■□□□ 1.68
SCUBE1-201ENST00000290460 USP19O94966 1318 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 PDZRN3Q9UPQ7 1066 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 CT47B1P0C2W7 299 aaPredicted RBP25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 TRIM27P14373 513 aa25.51■■□□□ 1.67
SCUBE1-201ENST00000290460 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
SCUBE1-201ENST00000290460 USP35Q9P2H5 1018 aa25.5■■□□□ 1.67
SCUBE1-201ENST00000290460 NRXN3Q9Y4C0 1643 aa25.5■■□□□ 1.67
SCUBE1-201ENST00000290460 RWDD1Q9H446 243 aaPredicted RBP25.49■■□□□ 1.67
SCUBE1-201ENST00000290460 ATP7BP35670 1465 aa25.49■■□□□ 1.67
SCUBE1-201ENST00000290460 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
SCUBE1-201ENST00000290460 IL16Q14005 1332 aa25.48■■□□□ 1.67
SCUBE1-201ENST00000290460 METP08581 1390 aa25.47■■□□□ 1.67
SCUBE1-201ENST00000290460 NOB1Q9ULX3 412 aaKnown RBP25.47■■□□□ 1.67
SCUBE1-201ENST00000290460 CDC42BPGQ6DT37 1551 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 FCHSD2O94868 740 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 RSPH6AQ9H0K4 717 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 HMOX1P09601 288 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 TXNDC2Q86VQ3 553 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 ITPRIPQ8IWB1 547 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 PNNQ9H307 717 aaKnown RBP25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 ZRANB1Q9UGI0 708 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 PPIP5K1Q6PFW1 1433 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 NME9Q86XW9 330 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 NFKBIBQ15653 356 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 FAM135BQ49AJ0 1406 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
SCUBE1-201ENST00000290460 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
SCUBE1-201ENST00000290460 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 THUMPD2Q9BTF0 503 aaKnown RBP25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 DDX19BQ9UMR2 479 aa25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.66
SCUBE1-201ENST00000290460 ZMYM3Q14202 1370 aa25.39■■□□□ 1.66
SCUBE1-201ENST00000290460 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
SCUBE1-201ENST00000290460 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
SCUBE1-201ENST00000290460 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 CPS1P31327 1500 aa25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 KIF16BQ96L93 1317 aa25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 IL13P35225 146 aa25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 RRS1Q15050 365 aaKnown RBP25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 NFE2L2Q16236 605 aa25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 HDAC1Q13547 482 aaPredicted RBP25.34■■□□□ 1.65
SCUBE1-201ENST00000290460 KIF13AQ9H1H9 1805 aa25.34■■□□□ 1.65
SCUBE1-201ENST00000290460 MON2Q7Z3U7 1717 aa25.33■■□□□ 1.65
SCUBE1-201ENST00000290460 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.64
SCUBE1-201ENST00000290460 ZBTB40Q9NUA8 1239 aa25.33■■□□□ 1.64
SCUBE1-201ENST00000290460 CDK12Q9NYV4 1490 aaPredicted RBP25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 IPO8O15397 1037 aaKnown RBP25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 ALDH1L2Q3SY69 923 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 COG3Q96JB2 828 aa25.31■■□□□ 1.64
SCUBE1-201ENST00000290460 TSPYL6Q8N831 410 aa25.3■■□□□ 1.64
SCUBE1-201ENST00000290460 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 ITSN1Q15811 1721 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 PRR36Q9H6K5 1346 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 FRAT2O75474 233 aaPredicted RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 TBC1D32Q96NH3 1257 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 UPF2Q9HAU5 1272 aaKnown RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 ELL2O00472 640 aaPredicted RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms