RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ATP6V1DQ9Y5K8 247 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 SLC4A2P04920 1241 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 CEBPZQ03701 1054 aaKnown RBP19.04■□□□□ 0.64
USP43-201ENST00000285199 IL1RAPL2Q9NP60 686 aa19.04■□□□□ 0.64
USP43-201ENST00000285199 SF3A1Q15459 793 aaKnown RBP19.03■□□□□ 0.64
USP43-201ENST00000285199 MBD3O95983 291 aa19.02■□□□□ 0.64
USP43-201ENST00000285199 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
USP43-201ENST00000285199 TRIM5Q9C035 493 aa19.02■□□□□ 0.64
USP43-201ENST00000285199 ISY1Q9ULR0 285 aaKnown RBP19.02■□□□□ 0.64
USP43-201ENST00000285199 PRAM1Q96QH2 718 aa19.02■□□□□ 0.63
USP43-201ENST00000285199 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.63
USP43-201ENST00000285199 SURF6O75683 361 aaKnown RBP19.01■□□□□ 0.63
USP43-201ENST00000285199 FAM184AQ8NB25 1140 aa19.01■□□□□ 0.63
USP43-201ENST00000285199 FAM177BA6PVY3 158 aa19.01■□□□□ 0.63
USP43-201ENST00000285199 RRS1Q15050 365 aaKnown RBP19.01■□□□□ 0.63
USP43-201ENST00000285199 MAP7D2Q96T17 732 aa19.01■□□□□ 0.63
USP43-201ENST00000285199 USP25Q9UHP3 1055 aa19.01■□□□□ 0.63
USP43-201ENST00000285199 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
USP43-201ENST00000285199 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
USP43-201ENST00000285199 ARHGEF11O15085 1522 aa19■□□□□ 0.63
USP43-201ENST00000285199 FMNL2Q96PY5 1086 aa19■□□□□ 0.63
USP43-201ENST00000285199 PODXL2Q9NZ53 605 aa19■□□□□ 0.63
USP43-201ENST00000285199 DTNBO60941 627 aa19■□□□□ 0.63
USP43-201ENST00000285199 FERMT3Q86UX7 667 aa19■□□□□ 0.63
USP43-201ENST00000285199 PDCL3Q9H2J4 239 aa19■□□□□ 0.63
USP43-201ENST00000285199 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
USP43-201ENST00000285199 ERC2O15083 957 aa18.99■□□□□ 0.63
USP43-201ENST00000285199 IGSF3O75054 1194 aa18.98■□□□□ 0.63
USP43-201ENST00000285199 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
USP43-201ENST00000285199 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
USP43-201ENST00000285199 KDM4AO75164 1064 aa18.98■□□□□ 0.63
USP43-201ENST00000285199 ZKSCAN1P17029 563 aaPredicted RBP18.98■□□□□ 0.63
USP43-201ENST00000285199 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
USP43-201ENST00000285199 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
USP43-201ENST00000285199 SPDYE4A6NLX3 237 aa18.97■□□□□ 0.63
USP43-201ENST00000285199 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
USP43-201ENST00000285199 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
USP43-201ENST00000285199 GPATCH3Q96I76 525 aa18.96■□□□□ 0.63
USP43-201ENST00000285199 STK3Q13188 491 aa18.96■□□□□ 0.63
USP43-201ENST00000285199 F6X3S4 739 aa18.96■□□□□ 0.63
USP43-201ENST00000285199 HTATSF1O43719 755 aaKnown RBP18.96■□□□□ 0.63
USP43-201ENST00000285199 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
USP43-201ENST00000285199 TPD52L1Q16890 204 aaPredicted RBP18.95■□□□□ 0.62
USP43-201ENST00000285199 GORABQ5T7V8 394 aa18.95■□□□□ 0.62
USP43-201ENST00000285199 CAMK4Q16566 473 aa18.95■□□□□ 0.62
USP43-201ENST00000285199 SASS6Q6UVJ0 657 aa18.95■□□□□ 0.62
USP43-201ENST00000285199 IFIT2P09913 472 aaKnown RBP18.94■□□□□ 0.62
USP43-201ENST00000285199 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
USP43-201ENST00000285199 ZSCAN23Q3MJ62 389 aa18.94■□□□□ 0.62
USP43-201ENST00000285199 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
USP43-201ENST00000285199 NINLQ9Y2I6 1382 aa18.94■□□□□ 0.62
USP43-201ENST00000285199 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
USP43-201ENST00000285199 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
USP43-201ENST00000285199 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
USP43-201ENST00000285199 ZGPATQ8N5A5 531 aaKnown RBP18.93■□□□□ 0.62
USP43-201ENST00000285199 MCM10Q7L590 875 aa18.93■□□□□ 0.62
USP43-201ENST00000285199 CHAMP1Q96JM3 812 aa18.93■□□□□ 0.62
USP43-201ENST00000285199 UBTFL1P0CB47 393 aaPredicted RBP18.92■□□□□ 0.62
USP43-201ENST00000285199 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
USP43-201ENST00000285199 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
USP43-201ENST00000285199 KLHL40Q2TBA0 621 aa18.91■□□□□ 0.62
USP43-201ENST00000285199 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
USP43-201ENST00000285199 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
USP43-201ENST00000285199 HMGN5P82970 282 aaKnown RBP18.9■□□□□ 0.62
USP43-201ENST00000285199 CWC27Q6UX04 472 aaKnown RBP18.9■□□□□ 0.62
USP43-201ENST00000285199 MTERF4Q7Z6M4 381 aaKnown RBP18.9■□□□□ 0.62
USP43-201ENST00000285199 FILIP1Q7Z7B0 1213 aa18.9■□□□□ 0.62
USP43-201ENST00000285199 TTC12Q9H892 705 aaPredicted RBP18.9■□□□□ 0.62
USP43-201ENST00000285199 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
USP43-201ENST00000285199 BMP2KLQ5H9B9 411 aa18.89■□□□□ 0.62
USP43-201ENST00000285199 GAS2L3Q86XJ1 694 aa18.89■□□□□ 0.62
USP43-201ENST00000285199 CDK19Q9BWU1 502 aa18.89■□□□□ 0.61
USP43-201ENST00000285199 TRERF1Q96PN7 1200 aa18.89■□□□□ 0.61
USP43-201ENST00000285199 EMILIN1Q9Y6C2 1016 aa18.89■□□□□ 0.61
USP43-201ENST00000285199 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 HCLS1P14317 486 aaPredicted RBP18.88■□□□□ 0.61
USP43-201ENST00000285199 RUFY2Q8WXA3 655 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 SCAPERQ9BY12 1400 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 ERICH4A6NGS2 130 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 TSC1Q92574 1164 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
USP43-201ENST00000285199 TEFQ10587 303 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 PDCL2Q8N4E4 241 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 PPFIA3O75145 1194 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 GNAI2P04899 355 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 NUCB1Q02818 461 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 SDF4Q9BRK5 362 aa18.87■□□□□ 0.61
USP43-201ENST00000285199 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
USP43-201ENST00000285199 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
USP43-201ENST00000285199 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
USP43-201ENST00000285199 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
USP43-201ENST00000285199 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.86■□□□□ 0.61
USP43-201ENST00000285199 SKIDA1Q1XH10 827 aa18.86■□□□□ 0.61
USP43-201ENST00000285199 WDR33Q9C0J8 1336 aaKnown RBP18.86■□□□□ 0.61
USP43-201ENST00000285199 TPM4P67936 248 aa18.85■□□□□ 0.61
USP43-201ENST00000285199 CKAP2LQ8IYA6 745 aa18.85■□□□□ 0.61
USP43-201ENST00000285199 TXNDC2Q86VQ3 553 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms