RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 NPHP3Q7Z494 1330 aa29.86■■■□□ 2.37
PDLIM3-203ENST00000284771 PIP4K2BP78356 416 aa29.85■■■□□ 2.37
PDLIM3-203ENST00000284771 CGNL1Q0VF96 1302 aa29.84■■■□□ 2.37
PDLIM3-203ENST00000284771 CC2D1BQ5T0F9 858 aaKnown RBP29.84■■■□□ 2.37
PDLIM3-203ENST00000284771 PXDNQ92626 1479 aa29.83■■■□□ 2.37
PDLIM3-203ENST00000284771 NME9Q86XW9 330 aa29.83■■■□□ 2.37
PDLIM3-203ENST00000284771 TRPM3Q9HCF6 1732 aaPredicted RBP29.82■■■□□ 2.36
PDLIM3-203ENST00000284771 ZRANB1Q9UGI0 708 aa29.82■■■□□ 2.36
PDLIM3-203ENST00000284771 NHSL1Q5SYE7 1610 aa29.81■■■□□ 2.36
PDLIM3-203ENST00000284771 NPC1L1Q9UHC9 1359 aa29.81■■■□□ 2.36
PDLIM3-203ENST00000284771 GGNBP2Q9H3C7 697 aa29.81■■■□□ 2.36
PDLIM3-203ENST00000284771 SOS2Q07890 1332 aaPredicted RBP29.8■■■□□ 2.36
PDLIM3-203ENST00000284771 PAK3O75914 559 aaPredicted RBP29.8■■■□□ 2.36
PDLIM3-203ENST00000284771 BRD4O60885 1362 aaPredicted RBP29.79■■■□□ 2.36
PDLIM3-203ENST00000284771 TTC21AQ8NDW8 1320 aa29.78■■■□□ 2.36
PDLIM3-203ENST00000284771 PRKRIP1Q9H875 184 aaPredicted RBP29.77■■■□□ 2.36
PDLIM3-203ENST00000284771 KIF20BQ96Q89 1820 aa29.77■■■□□ 2.36
PDLIM3-203ENST00000284771 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
PDLIM3-203ENST00000284771 PIK3C2AO00443 1686 aa29.76■■■□□ 2.36
PDLIM3-203ENST00000284771 ABTB2Q8N961 1025 aa29.75■■■□□ 2.35
PDLIM3-203ENST00000284771 SBNO1A3KN83 1393 aa29.74■■■□□ 2.35
PDLIM3-203ENST00000284771 AHDC1Q5TGY3 1603 aaPredicted RBP29.74■■■□□ 2.35
PDLIM3-203ENST00000284771 NUTM2GQ5VZR2 741 aa29.73■■■□□ 2.35
PDLIM3-203ENST00000284771 NSD2O96028 1365 aa29.73■■■□□ 2.35
PDLIM3-203ENST00000284771 ANP32CO43423 234 aa29.72■■■□□ 2.35
PDLIM3-203ENST00000284771 ALS2Q96Q42 1657 aa29.72■■■□□ 2.35
PDLIM3-203ENST00000284771 SPATA31A3Q5VYP0 1347 aa29.72■■■□□ 2.35
PDLIM3-203ENST00000284771 PARD3Q8TEW0 1356 aa29.72■■■□□ 2.35
PDLIM3-203ENST00000284771 USP31Q70CQ4 1352 aa29.7■■■□□ 2.35
PDLIM3-203ENST00000284771 OVOS2A0A0J9YW53 1432 aa29.7■■■□□ 2.35
PDLIM3-203ENST00000284771 OVOS2Q6IE36 1432 aa29.7■■■□□ 2.35
PDLIM3-203ENST00000284771 ANKRD26Q9UPS8 1709 aa29.7■■■□□ 2.34
PDLIM3-203ENST00000284771 MARF1Q9Y4F3 1742 aaKnown RBP29.7■■■□□ 2.34
PDLIM3-203ENST00000284771 NLRP6P59044 892 aa29.69■■■□□ 2.34
PDLIM3-203ENST00000284771 MIER1Q8N108 512 aa29.69■■■□□ 2.34
PDLIM3-203ENST00000284771 TNS3Q68CZ2 1445 aa29.69■■■□□ 2.34
PDLIM3-203ENST00000284771 LMOD2Q6P5Q4 547 aa29.69■■■□□ 2.34
PDLIM3-203ENST00000284771 MORC1Q86VD1 984 aa29.68■■■□□ 2.34
PDLIM3-203ENST00000284771 COG3Q96JB2 828 aa29.67■■■□□ 2.34
PDLIM3-203ENST00000284771 FBLN1P23142 703 aa29.66■■■□□ 2.34
PDLIM3-203ENST00000284771 RALBP1Q15311 655 aa29.66■■■□□ 2.34
PDLIM3-203ENST00000284771 TNNT2P45379 298 aaPredicted RBP29.66■■■□□ 2.34
PDLIM3-203ENST00000284771 PHLPP1O60346 1717 aa29.65■■■□□ 2.34
PDLIM3-203ENST00000284771 USP54Q70EL1 1684 aa29.64■■■□□ 2.34
PDLIM3-203ENST00000284771 COL16A1Q07092 1604 aaPredicted RBP29.64■■■□□ 2.34
PDLIM3-203ENST00000284771 NLRP13Q86W25 1043 aa29.63■■■□□ 2.33
PDLIM3-203ENST00000284771 LRRC59Q96AG4 307 aaKnown RBP29.63■■■□□ 2.33
PDLIM3-203ENST00000284771 ARHGEF10O15013 1369 aa29.6■■■□□ 2.33
PDLIM3-203ENST00000284771 PLEKHG5O94827 1062 aa29.6■■■□□ 2.33
PDLIM3-203ENST00000284771 MED1Q15648 1581 aaPredicted RBP29.59■■■□□ 2.33
PDLIM3-203ENST00000284771 PPP2R1AP30153 589 aa29.59■■■□□ 2.33
PDLIM3-203ENST00000284771 USP19O94966 1318 aa29.58■■■□□ 2.33
PDLIM3-203ENST00000284771 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
PDLIM3-203ENST00000284771 SOX12O15370 315 aa29.56■■■□□ 2.32
PDLIM3-203ENST00000284771 MYBBP1AQ9BQG0 1328 aaKnown RBP29.56■■■□□ 2.32
PDLIM3-203ENST00000284771 CRYBG1Q9Y4K1 1723 aa29.54■■■□□ 2.32
PDLIM3-203ENST00000284771 SLIT3O75094 1523 aa29.54■■■□□ 2.32
PDLIM3-203ENST00000284771 GCP02774 474 aa29.54■■■□□ 2.32
PDLIM3-203ENST00000284771 CCDC184Q52MB2 194 aa29.54■■■□□ 2.32
PDLIM3-203ENST00000284771 MAP2P11137 1827 aaKnown RBP29.54■■■□□ 2.32
PDLIM3-203ENST00000284771 HSPA1LP34931 641 aa29.53■■■□□ 2.32
PDLIM3-203ENST00000284771 AATKQ6ZMQ8 1374 aa29.53■■■□□ 2.32
PDLIM3-203ENST00000284771 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
PDLIM3-203ENST00000284771 POLKQ9UBT6 870 aa29.53■■■□□ 2.32
PDLIM3-203ENST00000284771 PNPLA6Q8IY17 1366 aa29.53■■■□□ 2.32
PDLIM3-203ENST00000284771 NFAT5O94916 1531 aa29.5■■■□□ 2.31
PDLIM3-203ENST00000284771 MTHFSP49914 203 aa29.5■■■□□ 2.31
PDLIM3-203ENST00000284771 EMILIN1Q9Y6C2 1016 aa29.5■■■□□ 2.31
PDLIM3-203ENST00000284771 PHRF1Q9P1Y6 1649 aaKnown RBP29.49■■■□□ 2.31
PDLIM3-203ENST00000284771 KCNH5Q8NCM2 988 aa29.49■■■□□ 2.31
PDLIM3-203ENST00000284771 COL22A1Q8NFW1 1626 aaPredicted RBP29.47■■■□□ 2.31
PDLIM3-203ENST00000284771 MAP3K19Q56UN5 1328 aa29.46■■■□□ 2.31
PDLIM3-203ENST00000284771 ABCA3Q99758 1704 aa29.45■■■□□ 2.31
PDLIM3-203ENST00000284771 ZC3H6P61129 1189 aaKnown RBP29.44■■■□□ 2.3
PDLIM3-203ENST00000284771 ARHGEF25Q86VW2 580 aa29.44■■■□□ 2.3
PDLIM3-203ENST00000284771 SMG6Q86US8 1419 aaKnown RBP29.43■■■□□ 2.3
PDLIM3-203ENST00000284771 CCER2I3L3R5 266 aa29.43■■■□□ 2.3
PDLIM3-203ENST00000284771 PPM1GO15355 546 aaPredicted RBP29.43■■■□□ 2.3
PDLIM3-203ENST00000284771 PEAK1Q9H792 1746 aa29.43■■■□□ 2.3
PDLIM3-203ENST00000284771 LTN1O94822 1766 aa29.42■■■□□ 2.3
PDLIM3-203ENST00000284771 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
PDLIM3-203ENST00000284771 JCADQ9P266 1359 aa29.41■■■□□ 2.3
PDLIM3-203ENST00000284771 FBXO41Q8TF61 875 aa29.4■■■□□ 2.3
PDLIM3-203ENST00000284771 MRS2Q9HD23 443 aa29.37■■■□□ 2.29
PDLIM3-203ENST00000284771 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
PDLIM3-203ENST00000284771 HSP90AB2PQ58FF8 381 aa29.37■■■□□ 2.29
PDLIM3-203ENST00000284771 HAP1P54257 671 aaPredicted RBP29.36■■■□□ 2.29
PDLIM3-203ENST00000284771 CPDO75976 1380 aa29.36■■■□□ 2.29
PDLIM3-203ENST00000284771 ZBTB7CA1YPR0 619 aa29.35■■■□□ 2.29
PDLIM3-203ENST00000284771 HOXC9P31274 260 aa29.35■■■□□ 2.29
PDLIM3-203ENST00000284771 AMPHP49418 695 aa29.35■■■□□ 2.29
PDLIM3-203ENST00000284771 INSRP06213 1382 aa29.35■■■□□ 2.29
PDLIM3-203ENST00000284771 CDK12Q9NYV4 1490 aaPredicted RBP29.35■■■□□ 2.29
PDLIM3-203ENST00000284771 AXIN2Q9Y2T1 843 aa29.34■■■□□ 2.29
PDLIM3-203ENST00000284771 COL3A1P02461 1466 aaPredicted RBP29.34■■■□□ 2.29
PDLIM3-203ENST00000284771 CHRNA2Q15822 529 aa29.34■■■□□ 2.29
PDLIM3-203ENST00000284771 FLT4P35916 1363 aa29.33■■■□□ 2.29
PDLIM3-203ENST00000284771 IP6K1Q92551 441 aa29.33■■■□□ 2.29
PDLIM3-203ENST00000284771 KIF24Q5T7B8 1368 aa29.33■■■□□ 2.29
PDLIM3-203ENST00000284771 COL18A1P39060 1754 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms