RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 FBXO31Q5XUX0 539 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-201ENST00000277575 WASHC4Q2M389 1173 aa13.71□□□□□ -0.22
USP6NL-201ENST00000277575 NSD3Q9BZ95 1437 aa13.71□□□□□ -0.22
USP6NL-201ENST00000277575 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.22
USP6NL-201ENST00000277575 TRIM29Q14134 588 aa13.71□□□□□ -0.22
USP6NL-201ENST00000277575 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.22
USP6NL-201ENST00000277575 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.22
USP6NL-201ENST00000277575 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.22
USP6NL-201ENST00000277575 PTPN23Q9H3S7 1636 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 FAM177BA6PVY3 158 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 GNAI2P04899 355 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 RAD21O60216 631 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 ADGRF5Q8IZF2 1346 aa13.7□□□□□ -0.22
USP6NL-201ENST00000277575 ATF7IPQ6VMQ6 1270 aa13.69□□□□□ -0.22
USP6NL-201ENST00000277575 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-201ENST00000277575 CABP4P57796 275 aa13.69□□□□□ -0.22
USP6NL-201ENST00000277575 ZC3H6P61129 1189 aaKnown RBP13.69□□□□□ -0.22
USP6NL-201ENST00000277575 KIF14Q15058 1648 aa13.69□□□□□ -0.22
USP6NL-201ENST00000277575 VPS37CA5D8V6 355 aaPredicted RBP13.69□□□□□ -0.22
USP6NL-201ENST00000277575 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
USP6NL-201ENST00000277575 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
USP6NL-201ENST00000277575 SMC3Q9UQE7 1217 aa13.69□□□□□ -0.22
USP6NL-201ENST00000277575 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
USP6NL-201ENST00000277575 BECN2A8MW95 431 aa13.68□□□□□ -0.22
USP6NL-201ENST00000277575 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
USP6NL-201ENST00000277575 FSD1Q9BTV5 496 aa13.68□□□□□ -0.22
USP6NL-201ENST00000277575 NFXL1Q6ZNB6 911 aa13.67□□□□□ -0.22
USP6NL-201ENST00000277575 TMPOP42166 694 aaKnown RBP13.67□□□□□ -0.22
USP6NL-201ENST00000277575 CNTROBQ8N137 903 aa13.67□□□□□ -0.22
USP6NL-201ENST00000277575 GCC1Q96CN9 775 aa13.67□□□□□ -0.22
USP6NL-201ENST00000277575 DHX16O60231 1041 aaKnown RBP13.67□□□□□ -0.22
USP6NL-201ENST00000277575 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
USP6NL-201ENST00000277575 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
USP6NL-201ENST00000277575 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
USP6NL-201ENST00000277575 ERICH2A1L162 156 aa13.66□□□□□ -0.22
USP6NL-201ENST00000277575 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
USP6NL-201ENST00000277575 CEBPAP49715 358 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-201ENST00000277575 NUCB2P80303 420 aa13.66□□□□□ -0.22
USP6NL-201ENST00000277575 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
USP6NL-201ENST00000277575 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
USP6NL-201ENST00000277575 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-201ENST00000277575 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-201ENST00000277575 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
USP6NL-201ENST00000277575 PES1O00541 588 aaKnown RBP13.65□□□□□ -0.22
USP6NL-201ENST00000277575 FANCAO15360 1455 aa13.65□□□□□ -0.22
USP6NL-201ENST00000277575 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
USP6NL-201ENST00000277575 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
USP6NL-201ENST00000277575 KCNH5Q8NCM2 988 aa13.65□□□□□ -0.22
USP6NL-201ENST00000277575 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
USP6NL-201ENST00000277575 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 GSE1Q14687 1217 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
USP6NL-201ENST00000277575 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
USP6NL-201ENST00000277575 ERC1Q8IUD2 1116 aa13.64□□□□□ -0.23
USP6NL-201ENST00000277575 NME9Q86XW9 330 aa13.63□□□□□ -0.23
USP6NL-201ENST00000277575 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
USP6NL-201ENST00000277575 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
USP6NL-201ENST00000277575 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
USP6NL-201ENST00000277575 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
USP6NL-201ENST00000277575 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
USP6NL-201ENST00000277575 MYL6BP14649 208 aa13.62□□□□□ -0.23
USP6NL-201ENST00000277575 FOXO3O43524 673 aa13.62□□□□□ -0.23
USP6NL-201ENST00000277575 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-201ENST00000277575 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-201ENST00000277575 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
USP6NL-201ENST00000277575 FYB1O15117 783 aa13.62□□□□□ -0.23
USP6NL-201ENST00000277575 PSMA5P28066 241 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 NEK4P51957 841 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 SAFBQ15424 915 aaKnown RBP eCLIP13.61□□□□□ -0.23
USP6NL-201ENST00000277575 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 GPATCH8Q9UKJ3 1502 aaKnown RBP13.61□□□□□ -0.23
USP6NL-201ENST00000277575 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 CNNM1Q9NRU3 951 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
USP6NL-201ENST00000277575 GNAT3A8MTJ3 354 aa13.6□□□□□ -0.23
USP6NL-201ENST00000277575 TPM3P06753 285 aa13.6□□□□□ -0.23
USP6NL-201ENST00000277575 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
USP6NL-201ENST00000277575 RPRD2Q5VT52 1461 aaKnown RBP13.6□□□□□ -0.23
USP6NL-201ENST00000277575 LRRCC1Q9C099 1032 aa13.6□□□□□ -0.23
USP6NL-201ENST00000277575 SIL1Q9H173 461 aa13.6□□□□□ -0.23
USP6NL-201ENST00000277575 FOSBP53539 338 aa13.6□□□□□ -0.23
USP6NL-201ENST00000277575 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
USP6NL-201ENST00000277575 HIP1O00291 1037 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
USP6NL-201ENST00000277575 SRGAP3O43295 1099 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 MCM10Q7L590 875 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 NOS1P29475 1434 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
USP6NL-201ENST00000277575 DCTN1Q14203 1278 aa13.58□□□□□ -0.23
USP6NL-201ENST00000277575 TSR1Q2NL82 804 aaKnown RBP13.58□□□□□ -0.23
USP6NL-201ENST00000277575 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.23
USP6NL-201ENST00000277575 CCDC158Q5M9N0 1113 aa13.58□□□□□ -0.24
USP6NL-201ENST00000277575 PIP4K2BP78356 416 aa13.58□□□□□ -0.24
USP6NL-201ENST00000277575 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms