RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
UPF3B-201ENST00000276201 PXDNQ92626 1479 aa13.64□□□□□ -0.23
UPF3B-201ENST00000276201 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
UPF3B-201ENST00000276201 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
UPF3B-201ENST00000276201 ATP7BP35670 1465 aa13.64□□□□□ -0.23
UPF3B-201ENST00000276201 SOS2Q07890 1332 aaPredicted RBP13.64□□□□□ -0.23
UPF3B-201ENST00000276201 FOXO3O43524 673 aa13.63□□□□□ -0.23
UPF3B-201ENST00000276201 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
UPF3B-201ENST00000276201 PHF8Q9UPP1 1060 aa13.63□□□□□ -0.23
UPF3B-201ENST00000276201 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
UPF3B-201ENST00000276201 NBR1Q14596 966 aa13.63□□□□□ -0.23
UPF3B-201ENST00000276201 XPCQ01831 940 aaPredicted RBP13.61□□□□□ -0.23
UPF3B-201ENST00000276201 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
UPF3B-201ENST00000276201 TMC1Q8TDI8 760 aa13.61□□□□□ -0.23
UPF3B-201ENST00000276201 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
UPF3B-201ENST00000276201 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
UPF3B-201ENST00000276201 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
UPF3B-201ENST00000276201 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
UPF3B-201ENST00000276201 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
UPF3B-201ENST00000276201 PMFBP1Q8TBY8 1022 aa13.6□□□□□ -0.23
UPF3B-201ENST00000276201 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
UPF3B-201ENST00000276201 PARD3Q8TEW0 1356 aa13.59□□□□□ -0.23
UPF3B-201ENST00000276201 LRP6O75581 1613 aa13.59□□□□□ -0.23
UPF3B-201ENST00000276201 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.23
UPF3B-201ENST00000276201 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
UPF3B-201ENST00000276201 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
UPF3B-201ENST00000276201 SPATA31A6Q5VVP1 1343 aa13.58□□□□□ -0.24
UPF3B-201ENST00000276201 BLMP54132 1417 aaPredicted RBP13.58□□□□□ -0.24
UPF3B-201ENST00000276201 PDE4AP27815 886 aa13.58□□□□□ -0.24
UPF3B-201ENST00000276201 SRPK2P78362 688 aaKnown RBP13.58□□□□□ -0.24
UPF3B-201ENST00000276201 KRT28Q7Z3Y7 464 aa13.58□□□□□ -0.24
UPF3B-201ENST00000276201 RCAN3Q9UKA8 241 aa13.57□□□□□ -0.24
UPF3B-201ENST00000276201 EVC2Q86UK5 1308 aa13.57□□□□□ -0.24
UPF3B-201ENST00000276201 COL22A1Q8NFW1 1626 aaPredicted RBP13.56□□□□□ -0.24
UPF3B-201ENST00000276201 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
UPF3B-201ENST00000276201 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
UPF3B-201ENST00000276201 TRPM3Q9HCF6 1732 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-201ENST00000276201 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 PSME1Q06323 249 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 TNS3Q68CZ2 1445 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
UPF3B-201ENST00000276201 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
UPF3B-201ENST00000276201 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
UPF3B-201ENST00000276201 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
UPF3B-201ENST00000276201 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
UPF3B-201ENST00000276201 NUTM2BA6NNL0 878 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-201ENST00000276201 NUTM2EB1AL46 878 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-201ENST00000276201 NUTM2AQ8IVF1 878 aaPredicted RBP13.54□□□□□ -0.24
UPF3B-201ENST00000276201 TESK2Q96S53 571 aa13.54□□□□□ -0.24
UPF3B-201ENST00000276201 EXOC6Q8TAG9 804 aa13.53□□□□□ -0.24
UPF3B-201ENST00000276201 ACEP12821 1306 aa13.53□□□□□ -0.24
UPF3B-201ENST00000276201 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
UPF3B-201ENST00000276201 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
UPF3B-201ENST00000276201 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
UPF3B-201ENST00000276201 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
UPF3B-201ENST00000276201 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
UPF3B-201ENST00000276201 RGS17Q9UGC6 210 aaPredicted RBP13.5□□□□□ -0.25
UPF3B-201ENST00000276201 ARHGEF10O15013 1369 aa13.5□□□□□ -0.25
UPF3B-201ENST00000276201 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
UPF3B-201ENST00000276201 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
UPF3B-201ENST00000276201 ABCA3Q99758 1704 aa13.48□□□□□ -0.25
UPF3B-201ENST00000276201 NEFMP07197 916 aa13.48□□□□□ -0.25
UPF3B-201ENST00000276201 PRKCSHP14314 528 aaPredicted RBP13.48□□□□□ -0.25
UPF3B-201ENST00000276201 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
UPF3B-201ENST00000276201 USP6P35125 1406 aa13.47□□□□□ -0.25
UPF3B-201ENST00000276201 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
UPF3B-201ENST00000276201 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
UPF3B-201ENST00000276201 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
UPF3B-201ENST00000276201 PUS7Q96PZ0 661 aaKnown RBP13.46□□□□□ -0.25
UPF3B-201ENST00000276201 CRYBG1Q9Y4K1 1723 aa13.46□□□□□ -0.25
UPF3B-201ENST00000276201 MARF1Q9Y4F3 1742 aaKnown RBP13.46□□□□□ -0.26
UPF3B-201ENST00000276201 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
UPF3B-201ENST00000276201 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 PLEKHG5O94827 1062 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 SSH2Q76I76 1423 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
UPF3B-201ENST00000276201 TMF1P82094 1093 aa13.44□□□□□ -0.26
UPF3B-201ENST00000276201 AFF2P51816 1311 aa13.44□□□□□ -0.26
UPF3B-201ENST00000276201 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
UPF3B-201ENST00000276201 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
UPF3B-201ENST00000276201 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
UPF3B-201ENST00000276201 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
UPF3B-201ENST00000276201 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
UPF3B-201ENST00000276201 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
UPF3B-201ENST00000276201 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
UPF3B-201ENST00000276201 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
UPF3B-201ENST00000276201 HAP1P54257 671 aaPredicted RBP13.42□□□□□ -0.26
UPF3B-201ENST00000276201 NGLY1Q96IV0 654 aa13.42□□□□□ -0.26
UPF3B-201ENST00000276201 POLR3GLQ9BT43 218 aa13.42□□□□□ -0.26
UPF3B-201ENST00000276201 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
UPF3B-201ENST00000276201 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
UPF3B-201ENST00000276201 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
UPF3B-201ENST00000276201 TTC21BQ7Z4L5 1316 aa13.41□□□□□ -0.26
UPF3B-201ENST00000276201 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
UPF3B-201ENST00000276201 IL27Q8NEV9 243 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms