RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
SLC47A1-201ENST00000270570 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
SLC47A1-201ENST00000270570 LAMC1P11047 1609 aa16.49■□□□□ 0.23
SLC47A1-201ENST00000270570 CHMP5Q9NZZ3 219 aa16.49■□□□□ 0.23
SLC47A1-201ENST00000270570 ASXL2Q76L83 1435 aa16.49■□□□□ 0.23
SLC47A1-201ENST00000270570 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
SLC47A1-201ENST00000270570 MYOM1P52179 1685 aa16.49■□□□□ 0.23
SLC47A1-201ENST00000270570 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
SLC47A1-201ENST00000270570 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
SLC47A1-201ENST00000270570 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
SLC47A1-201ENST00000270570 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
SLC47A1-201ENST00000270570 NME9Q86XW9 330 aa16.47■□□□□ 0.23
SLC47A1-201ENST00000270570 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
SLC47A1-201ENST00000270570 FOXD4L6Q3SYB3 417 aaPredicted RBP16.46■□□□□ 0.23
SLC47A1-201ENST00000270570 FOXD4L3Q6VB84 417 aaPredicted RBP16.46■□□□□ 0.23
SLC47A1-201ENST00000270570 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
SLC47A1-201ENST00000270570 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.22
SLC47A1-201ENST00000270570 C16orf71Q8IYS4 520 aaPredicted RBP16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 ZBTB40Q9NUA8 1239 aa16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 ANKRD36BQ8N2N9 1353 aa16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 MAP3K4Q9Y6R4 1608 aa16.45■□□□□ 0.22
SLC47A1-201ENST00000270570 SLC4A10Q6U841 1118 aa16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 CEP152O94986 1710 aa16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 CD109Q6YHK3 1445 aa16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
SLC47A1-201ENST00000270570 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
SLC47A1-201ENST00000270570 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
SLC47A1-201ENST00000270570 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
SLC47A1-201ENST00000270570 TNPO1Q92973 898 aaKnown RBP16.43■□□□□ 0.22
SLC47A1-201ENST00000270570 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
SLC47A1-201ENST00000270570 C8orf58Q8NAV2 365 aa16.42■□□□□ 0.22
SLC47A1-201ENST00000270570 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
SLC47A1-201ENST00000270570 TWISTNBQ3B726 338 aaPredicted RBP16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 PNNQ9H307 717 aaKnown RBP16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 TBC1D9Q6ZT07 1266 aa16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
SLC47A1-201ENST00000270570 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 TSHZ3Q63HK5 1081 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 SMC5Q8IY18 1101 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 MBIPQ9NS73 344 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 TET3O43151 1660 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 SSFA2P28290 1259 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
SLC47A1-201ENST00000270570 MCM10Q7L590 875 aa16.39■□□□□ 0.21
SLC47A1-201ENST00000270570 AEBP1Q8IUX7 1158 aa16.39■□□□□ 0.21
SLC47A1-201ENST00000270570 NUCB1Q02818 461 aa16.39■□□□□ 0.21
SLC47A1-201ENST00000270570 MROH2AA6NES4 1674 aa16.38■□□□□ 0.21
SLC47A1-201ENST00000270570 GLIPR1L2Q4G1C9 344 aa16.38■□□□□ 0.21
SLC47A1-201ENST00000270570 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
SLC47A1-201ENST00000270570 SHROOM2Q13796 1616 aa16.38■□□□□ 0.21
SLC47A1-201ENST00000270570 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
SLC47A1-201ENST00000270570 KIF1BO60333 1816 aa16.37■□□□□ 0.21
SLC47A1-201ENST00000270570 MYOM2P54296 1465 aa16.37■□□□□ 0.21
SLC47A1-201ENST00000270570 VAMP4O75379 141 aa16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 ARID3AQ99856 593 aa16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 GRPEL1Q9HAV7 217 aa16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 PPRC1Q5VV67 1664 aaKnown RBP16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
SLC47A1-201ENST00000270570 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 GAS2L3Q86XJ1 694 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 EFCAB6Q5THR3 1501 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 DTNBO60941 627 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 MCTP1Q6DN14 999 aa16.35■□□□□ 0.21
SLC47A1-201ENST00000270570 FCHSD2O94868 740 aa16.34■□□□□ 0.21
SLC47A1-201ENST00000270570 AAMPQ13685 434 aa16.34■□□□□ 0.21
SLC47A1-201ENST00000270570 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
SLC47A1-201ENST00000270570 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
SLC47A1-201ENST00000270570 F6X3S4 739 aa16.34■□□□□ 0.21
SLC47A1-201ENST00000270570 RPGRIP1LQ68CZ1 1315 aa16.33■□□□□ 0.21
SLC47A1-201ENST00000270570 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
SLC47A1-201ENST00000270570 PKP1Q13835 747 aa16.33■□□□□ 0.2
SLC47A1-201ENST00000270570 COG3Q96JB2 828 aa16.33■□□□□ 0.2
SLC47A1-201ENST00000270570 NUTM2GQ5VZR2 741 aa16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 MPNDQ8N594 471 aa16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 TULP4Q9NRJ4 1543 aa16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 QRICH2Q9H0J4 1663 aa16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 GNAI1P63096 354 aa16.32■□□□□ 0.2
SLC47A1-201ENST00000270570 ABCC11Q96J66 1382 aa16.31■□□□□ 0.2
SLC47A1-201ENST00000270570 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
SLC47A1-201ENST00000270570 LTV1Q96GA3 475 aaPredicted RBP16.31■□□□□ 0.2
SLC47A1-201ENST00000270570 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
SLC47A1-201ENST00000270570 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
SLC47A1-201ENST00000270570 HSP90AA2PQ14568 343 aaPredicted RBP16.3■□□□□ 0.2
SLC47A1-201ENST00000270570 CAVIN1Q6NZI2 390 aaKnown RBP16.3■□□□□ 0.2
SLC47A1-201ENST00000270570 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms