RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 MROH1Q8NDA8 1641 aa14.48□□□□□ -0.09
CLSTN3-201ENST00000266546 APAF1O14727 1248 aa14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 WAPLQ7Z5K2 1190 aa14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 TBX22Q9Y458 520 aa14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 NUDT16Q96DE0 195 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 GGNBP2Q9H3C7 697 aa14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 RRP7AQ9Y3A4 280 aaKnown RBP14.47□□□□□ -0.09
CLSTN3-201ENST00000266546 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.09
CLSTN3-201ENST00000266546 ABCC11Q96J66 1382 aa14.46□□□□□ -0.09
CLSTN3-201ENST00000266546 PTMSP20962 102 aa14.46□□□□□ -0.09
CLSTN3-201ENST00000266546 MTHFSP49914 203 aa14.46□□□□□ -0.09
CLSTN3-201ENST00000266546 RUNDC1Q96C34 613 aa14.46□□□□□ -0.09
CLSTN3-201ENST00000266546 SETBP1Q9Y6X0 1596 aa14.46□□□□□ -0.1
CLSTN3-201ENST00000266546 AMOTL2Q9Y2J4 779 aa14.46□□□□□ -0.1
CLSTN3-201ENST00000266546 KIAA1210Q9ULL0 1709 aa14.45□□□□□ -0.1
CLSTN3-201ENST00000266546 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
CLSTN3-201ENST00000266546 ADAMTS8Q9UP79 889 aa14.45□□□□□ -0.1
CLSTN3-201ENST00000266546 LMOD3Q0VAK6 560 aa14.44□□□□□ -0.1
CLSTN3-201ENST00000266546 COG6Q9Y2V7 657 aa14.44□□□□□ -0.1
CLSTN3-201ENST00000266546 KDM5AP29375 1690 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-201ENST00000266546 E9PSI1 815 aa14.44□□□□□ -0.1
CLSTN3-201ENST00000266546 BCORL1Q5H9F3 1711 aa14.44□□□□□ -0.1
CLSTN3-201ENST00000266546 DDX11L8A8MPP1 907 aa14.43□□□□□ -0.1
CLSTN3-201ENST00000266546 ITPRIPQ8IWB1 547 aa14.42□□□□□ -0.1
CLSTN3-201ENST00000266546 A2ML1A8K2U0 1454 aa14.42□□□□□ -0.1
CLSTN3-201ENST00000266546 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 SYNMO15061 1565 aa14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 TPRNQ4KMQ1 711 aa14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 CLTCQ00610 1675 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 AMPHP49418 695 aa14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-201ENST00000266546 PLEKHG1Q9ULL1 1385 aa14.4□□□□□ -0.1
CLSTN3-201ENST00000266546 NRXN1Q9ULB1 1477 aa14.4□□□□□ -0.1
CLSTN3-201ENST00000266546 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
CLSTN3-201ENST00000266546 INSRP06213 1382 aa14.39□□□□□ -0.11
CLSTN3-201ENST00000266546 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-201ENST00000266546 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
CLSTN3-201ENST00000266546 PROSER2Q86WR7 435 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-201ENST00000266546 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
CLSTN3-201ENST00000266546 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
CLSTN3-201ENST00000266546 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
CLSTN3-201ENST00000266546 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
CLSTN3-201ENST00000266546 PSME1Q06323 249 aa14.37□□□□□ -0.11
CLSTN3-201ENST00000266546 ARID3AQ99856 593 aa14.37□□□□□ -0.11
CLSTN3-201ENST00000266546 ATF3P18847 181 aa14.37□□□□□ -0.11
CLSTN3-201ENST00000266546 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
CLSTN3-201ENST00000266546 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
CLSTN3-201ENST00000266546 NEXMIFQ5QGS0 1516 aa14.36□□□□□ -0.11
CLSTN3-201ENST00000266546 NPHP1O15259 732 aa14.36□□□□□ -0.11
CLSTN3-201ENST00000266546 RTF1Q92541 710 aaKnown RBP14.36□□□□□ -0.11
CLSTN3-201ENST00000266546 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
CLSTN3-201ENST00000266546 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
CLSTN3-201ENST00000266546 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
CLSTN3-201ENST00000266546 FAM135BQ49AJ0 1406 aa14.35□□□□□ -0.11
CLSTN3-201ENST00000266546 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
CLSTN3-201ENST00000266546 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.11
CLSTN3-201ENST00000266546 NLRP6P59044 892 aa14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 SKOR2Q2VWA4 1001 aaPredicted RBP14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 SKAP1Q86WV1 359 aa14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 LTKP29376 864 aa14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
CLSTN3-201ENST00000266546 IQGAP1P46940 1657 aa14.32□□□□□ -0.12
CLSTN3-201ENST00000266546 ALKQ9UM73 1620 aa14.32□□□□□ -0.12
CLSTN3-201ENST00000266546 A0A1W2PP64 1363 aa14.32□□□□□ -0.12
CLSTN3-201ENST00000266546 DDX49Q9Y6V7 483 aaKnown RBP14.32□□□□□ -0.12
CLSTN3-201ENST00000266546 TTC21AQ8NDW8 1320 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 MRE11P49959 708 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 PIK3R4Q99570 1358 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 FYB1O15117 783 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 FCHSD2O94868 740 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 WDR63Q8IWG1 891 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 PPLO60437 1756 aa14.31□□□□□ -0.12
CLSTN3-201ENST00000266546 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
CLSTN3-201ENST00000266546 ESCO1Q5FWF5 840 aa14.3□□□□□ -0.12
CLSTN3-201ENST00000266546 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
CLSTN3-201ENST00000266546 RIPK4P57078 832 aa14.3□□□□□ -0.12
CLSTN3-201ENST00000266546 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
CLSTN3-201ENST00000266546 KIAA2012Q0VF49 1180 aa14.29□□□□□ -0.12
CLSTN3-201ENST00000266546 METP08581 1390 aa14.29□□□□□ -0.12
CLSTN3-201ENST00000266546 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
CLSTN3-201ENST00000266546 TMEM131LA2VDJ0 1609 aa14.29□□□□□ -0.12
CLSTN3-201ENST00000266546 TRAK2O60296 914 aa14.29□□□□□ -0.12
CLSTN3-201ENST00000266546 ACEP12821 1306 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 MROH2AA6NES4 1674 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 EDC4Q6P2E9 1401 aaKnown RBP14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 CSB-PGBD3P0DP91 1061 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 DLC1Q96QB1 1528 aa14.28□□□□□ -0.12
CLSTN3-201ENST00000266546 APBB1O00213 710 aa14.27□□□□□ -0.12
CLSTN3-201ENST00000266546 NME9Q86XW9 330 aa14.27□□□□□ -0.13
CLSTN3-201ENST00000266546 TTC21BQ7Z4L5 1316 aa14.26□□□□□ -0.13
CLSTN3-201ENST00000266546 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
CLSTN3-201ENST00000266546 ATP7BP35670 1465 aa14.26□□□□□ -0.13
CLSTN3-201ENST00000266546 MCCP23508 829 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms