RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
CSPG5-201ENST00000264723 FGD1P98174 961 aa24.53■■□□□ 1.52
CSPG5-201ENST00000264723 ZNF428Q96B54 188 aa24.53■■□□□ 1.52
CSPG5-201ENST00000264723 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
CSPG5-201ENST00000264723 ESCO1Q5FWF5 840 aa24.52■■□□□ 1.52
CSPG5-201ENST00000264723 CHMP3Q9Y3E7 222 aa24.52■■□□□ 1.52
CSPG5-201ENST00000264723 DDX11L8A8MPP1 907 aa24.51■■□□□ 1.51
CSPG5-201ENST00000264723 XPCQ01831 940 aaPredicted RBP24.51■■□□□ 1.51
CSPG5-201ENST00000264723 ABCC2Q92887 1545 aa24.5■■□□□ 1.51
CSPG5-201ENST00000264723 MCM4P33991 863 aa24.5■■□□□ 1.51
CSPG5-201ENST00000264723 CHD1LQ86WJ1 897 aa24.49■■□□□ 1.51
CSPG5-201ENST00000264723 CCDC9Q9Y3X0 531 aaKnown RBP24.49■■□□□ 1.51
CSPG5-201ENST00000264723 DNTTIP2Q5QJE6 756 aaKnown RBP24.49■■□□□ 1.51
CSPG5-201ENST00000264723 MIS18AQ9NYP9 233 aa24.49■■□□□ 1.51
CSPG5-201ENST00000264723 C1orf141Q5JVX7 400 aa24.48■■□□□ 1.51
CSPG5-201ENST00000264723 BLMP54132 1417 aaPredicted RBP24.48■■□□□ 1.51
CSPG5-201ENST00000264723 AAMPQ13685 434 aa24.47■■□□□ 1.51
CSPG5-201ENST00000264723 THEMISQ8N1K5 641 aaPredicted RBP24.47■■□□□ 1.51
CSPG5-201ENST00000264723 MCCP23508 829 aa24.46■■□□□ 1.51
CSPG5-201ENST00000264723 KIAA1211Q6ZU35 1233 aa24.46■■□□□ 1.51
CSPG5-201ENST00000264723 FAM83GA6ND36 823 aa24.46■■□□□ 1.51
CSPG5-201ENST00000264723 TBC1D32Q96NH3 1257 aa24.45■■□□□ 1.5
CSPG5-201ENST00000264723 FYB1O15117 783 aa24.45■■□□□ 1.5
CSPG5-201ENST00000264723 ZNF692Q9BU19 519 aaPredicted RBP24.45■■□□□ 1.5
CSPG5-201ENST00000264723 MSNP26038 577 aaKnown RBP24.44■■□□□ 1.5
CSPG5-201ENST00000264723 CFAP65Q6ZU64 1925 aaKnown RBP24.44■■□□□ 1.5
CSPG5-201ENST00000264723 MCTP1Q6DN14 999 aa24.44■■□□□ 1.5
CSPG5-201ENST00000264723 FCHSD2O94868 740 aa24.43■■□□□ 1.5
CSPG5-201ENST00000264723 ZMYM4Q5VZL5 1548 aa24.43■■□□□ 1.5
CSPG5-201ENST00000264723 GLIPR1L2Q4G1C9 344 aa24.43■■□□□ 1.5
CSPG5-201ENST00000264723 MCM10Q7L590 875 aa24.42■■□□□ 1.5
CSPG5-201ENST00000264723 ZRANB1Q9UGI0 708 aa24.42■■□□□ 1.5
CSPG5-201ENST00000264723 WASLO00401 505 aaPredicted RBP24.41■■□□□ 1.5
CSPG5-201ENST00000264723 PIK3C2GO75747 1445 aa24.41■■□□□ 1.5
CSPG5-201ENST00000264723 NLRP2Q9NX02 1062 aa24.41■■□□□ 1.5
CSPG5-201ENST00000264723 SLC4A2P04920 1241 aa24.41■■□□□ 1.5
CSPG5-201ENST00000264723 NCKAP5LQ9HCH0 1330 aa24.41■■□□□ 1.5
CSPG5-201ENST00000264723 NINLQ9Y2I6 1382 aa24.4■■□□□ 1.5
CSPG5-201ENST00000264723 ST18O60284 1047 aa24.4■■□□□ 1.5
CSPG5-201ENST00000264723 ZNF518AQ6AHZ1 1483 aa24.4■■□□□ 1.5
CSPG5-201ENST00000264723 SMARCA5O60264 1052 aaPredicted RBP24.39■■□□□ 1.5
CSPG5-201ENST00000264723 AIMP1Q12904 312 aaKnown RBP24.39■■□□□ 1.49
CSPG5-201ENST00000264723 ZNF521Q96K83 1311 aa24.39■■□□□ 1.49
CSPG5-201ENST00000264723 ADGBQ8N7X0 1667 aa24.39■■□□□ 1.49
CSPG5-201ENST00000264723 NFE2L2Q16236 605 aa24.38■■□□□ 1.49
CSPG5-201ENST00000264723 AMOTL2Q9Y2J4 779 aa24.38■■□□□ 1.49
CSPG5-201ENST00000264723 CDC45O75419 566 aa24.37■■□□□ 1.49
CSPG5-201ENST00000264723 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-201ENST00000264723 POLR3AO14802 1390 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-201ENST00000264723 ANO2Q9NQ90 1003 aa24.37■■□□□ 1.49
CSPG5-201ENST00000264723 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
CSPG5-201ENST00000264723 RBM42Q9BTD8 480 aaKnown RBP24.37■■□□□ 1.49
CSPG5-201ENST00000264723 TSPYL6Q8N831 410 aa24.36■■□□□ 1.49
CSPG5-201ENST00000264723 SAMD9LQ8IVG5 1584 aa24.36■■□□□ 1.49
CSPG5-201ENST00000264723 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.49
CSPG5-201ENST00000264723 NPHP1O15259 732 aa24.35■■□□□ 1.49
CSPG5-201ENST00000264723 PANK2Q9BZ23 570 aa24.35■■□□□ 1.49
CSPG5-201ENST00000264723 PHACTR3Q96KR7 559 aa24.35■■□□□ 1.49
CSPG5-201ENST00000264723 ABCA8O94911 1581 aa24.33■■□□□ 1.49
CSPG5-201ENST00000264723 CT47B1P0C2W7 299 aaPredicted RBP24.33■■□□□ 1.49
CSPG5-201ENST00000264723 CFAP44Q96MT7 982 aa24.33■■□□□ 1.49
CSPG5-201ENST00000264723 RSPH6AQ9H0K4 717 aa24.33■■□□□ 1.48
CSPG5-201ENST00000264723 CHMP4AQ9BY43 222 aa24.32■■□□□ 1.48
CSPG5-201ENST00000264723 CAVIN1Q6NZI2 390 aaKnown RBP24.32■■□□□ 1.48
CSPG5-201ENST00000264723 GCC1Q96CN9 775 aa24.32■■□□□ 1.48
CSPG5-201ENST00000264723 KDM5DQ9BY66 1539 aa24.31■■□□□ 1.48
CSPG5-201ENST00000264723 ATF3P18847 181 aa24.31■■□□□ 1.48
CSPG5-201ENST00000264723 KRT24Q2M2I5 525 aa24.31■■□□□ 1.48
CSPG5-201ENST00000264723 USHBP1Q8N6Y0 703 aa24.31■■□□□ 1.48
CSPG5-201ENST00000264723 MRE11P49959 708 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 TRMT2AQ8IZ69 625 aaKnown RBP24.3■■□□□ 1.48
CSPG5-201ENST00000264723 RAPGEF4Q8WZA2 1011 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 INTS3Q68E01 1043 aaKnown RBP24.3■■□□□ 1.48
CSPG5-201ENST00000264723 RNF214Q8ND24 703 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 F6X3S4 739 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 UGGT1Q9NYU2 1555 aa24.3■■□□□ 1.48
CSPG5-201ENST00000264723 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
CSPG5-201ENST00000264723 ANKLE2Q86XL3 938 aa24.29■■□□□ 1.48
CSPG5-201ENST00000264723 MPNDQ8N594 471 aa24.29■■□□□ 1.48
CSPG5-201ENST00000264723 NEK4P51957 841 aa24.28■■□□□ 1.48
CSPG5-201ENST00000264723 MBIPQ9NS73 344 aa24.28■■□□□ 1.48
CSPG5-201ENST00000264723 K7ELQ4 463 aaPredicted RBP24.27■■□□□ 1.48
CSPG5-201ENST00000264723 PRPF40AO75400 957 aaKnown RBP24.27■■□□□ 1.48
CSPG5-201ENST00000264723 ZC3H6P61129 1189 aaKnown RBP24.27■■□□□ 1.48
CSPG5-201ENST00000264723 C16orf71Q8IYS4 520 aaPredicted RBP24.27■■□□□ 1.48
CSPG5-201ENST00000264723 REC8O95072 547 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 EVA1CP58658 441 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 EXOC6BQ9Y2D4 811 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 TSHZ3Q63HK5 1081 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 TTC5Q8N0Z6 440 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 TNPO1Q92973 898 aaKnown RBP24.27■■□□□ 1.48
CSPG5-201ENST00000264723 GRPEL1Q9HAV7 217 aa24.27■■□□□ 1.48
CSPG5-201ENST00000264723 FOXO3O43524 673 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 TBC1D9Q6ZT07 1266 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 TRIM35Q9UPQ4 493 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 EIF2AK4Q9P2K8 1649 aaKnown RBP24.26■■□□□ 1.47
CSPG5-201ENST00000264723 SKOR2Q2VWA4 1001 aaPredicted RBP24.26■■□□□ 1.47
CSPG5-201ENST00000264723 GORABQ5T7V8 394 aa24.26■■□□□ 1.47
CSPG5-201ENST00000264723 HDGFL1Q5TGJ6 251 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms