RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
TCF3-201ENST00000262965 AKAP17AQ02040 695 aaKnown RBP16.37■□□□□ 0.21
TCF3-201ENST00000262965 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 GCC1Q96CN9 775 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 ERC2O15083 957 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 CCDC173Q0VFZ6 552 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 CHD1LQ86WJ1 897 aa16.36■□□□□ 0.21
TCF3-201ENST00000262965 CEBPZQ03701 1054 aaKnown RBP16.35■□□□□ 0.21
TCF3-201ENST00000262965 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
TCF3-201ENST00000262965 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
TCF3-201ENST00000262965 PRAM1Q96QH2 718 aa16.35■□□□□ 0.21
TCF3-201ENST00000262965 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
TCF3-201ENST00000262965 TSPY26PQ9H489 355 aa16.35■□□□□ 0.21
TCF3-201ENST00000262965 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
TCF3-201ENST00000262965 TMEM57Q8N5G2 664 aa16.34■□□□□ 0.21
TCF3-201ENST00000262965 MARCH6O60337 910 aa16.34■□□□□ 0.21
TCF3-201ENST00000262965 NLRP6P59044 892 aa16.34■□□□□ 0.21
TCF3-201ENST00000262965 TRIM29Q14134 588 aa16.34■□□□□ 0.21
TCF3-201ENST00000262965 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.21
TCF3-201ENST00000262965 MAP4K4O95819 1239 aaPredicted RBP16.33■□□□□ 0.21
TCF3-201ENST00000262965 SULT6B1Q6IMI4 303 aa16.33■□□□□ 0.21
TCF3-201ENST00000262965 FSD1Q9BTV5 496 aa16.33■□□□□ 0.21
TCF3-201ENST00000262965 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
TCF3-201ENST00000262965 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
TCF3-201ENST00000262965 GNAI3P08754 354 aa16.33■□□□□ 0.2
TCF3-201ENST00000262965 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
TCF3-201ENST00000262965 CABP1Q9NZU7 370 aa16.33■□□□□ 0.2
TCF3-201ENST00000262965 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
TCF3-201ENST00000262965 TPM1P09493 284 aa16.32■□□□□ 0.2
TCF3-201ENST00000262965 TRDNQ13061 729 aa16.32■□□□□ 0.2
TCF3-201ENST00000262965 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
TCF3-201ENST00000262965 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
TCF3-201ENST00000262965 MNS1Q8NEH6 495 aa16.32■□□□□ 0.2
TCF3-201ENST00000262965 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 ABCC5O15440 1437 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 TPM2P07951 284 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 CNTROBQ8N137 903 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 CCDC141Q6ZP82 1450 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
TCF3-201ENST00000262965 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 KIF14Q15058 1648 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 PSME1Q06323 249 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 TBC1D2Q9BYX2 928 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
TCF3-201ENST00000262965 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
TCF3-201ENST00000262965 CHMP4CQ96CF2 233 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 WDR62O43379 1518 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 STK3Q13188 491 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 GNAI2P04899 355 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 GPS2Q13227 327 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 SSH1Q8WYL5 1049 aa16.29■□□□□ 0.2
TCF3-201ENST00000262965 UPF3BQ9BZI7 483 aaKnown RBP16.29■□□□□ 0.2
TCF3-201ENST00000262965 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
TCF3-201ENST00000262965 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
TCF3-201ENST00000262965 RALYLQ86SE5 291 aaKnown RBP16.28■□□□□ 0.2
TCF3-201ENST00000262965 PKNOX2Q96KN3 472 aa16.28■□□□□ 0.2
TCF3-201ENST00000262965 THOC2Q8NI27 1593 aaKnown RBP16.28■□□□□ 0.2
TCF3-201ENST00000262965 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.2
TCF3-201ENST00000262965 MCM2P49736 904 aa16.27■□□□□ 0.2
TCF3-201ENST00000262965 PDILTQ8N807 584 aa16.27■□□□□ 0.2
TCF3-201ENST00000262965 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.2
TCF3-201ENST00000262965 LRRFIP1Q32MZ4 808 aaKnown RBP16.27■□□□□ 0.2
TCF3-201ENST00000262965 DNAJC2Q99543 621 aaKnown RBP16.27■□□□□ 0.2
TCF3-201ENST00000262965 CTTNBP2Q8WZ74 1663 aa16.27■□□□□ 0.2
TCF3-201ENST00000262965 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.19
TCF3-201ENST00000262965 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.19
TCF3-201ENST00000262965 SYCE3A1L190 88 aa16.27■□□□□ 0.19
TCF3-201ENST00000262965 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.19
TCF3-201ENST00000262965 TTLL5Q6EMB2 1281 aa16.27■□□□□ 0.19
TCF3-201ENST00000262965 RRS1Q15050 365 aaKnown RBP16.26■□□□□ 0.19
TCF3-201ENST00000262965 CCDC30Q5VVM6 783 aa16.26■□□□□ 0.19
TCF3-201ENST00000262965 TXNDC2Q86VQ3 553 aa16.26■□□□□ 0.19
TCF3-201ENST00000262965 UGGT2Q9NYU1 1516 aa16.26■□□□□ 0.19
TCF3-201ENST00000262965 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
TCF3-201ENST00000262965 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
TCF3-201ENST00000262965 SYTL4Q96C24 671 aaPredicted RBP16.26■□□□□ 0.19
TCF3-201ENST00000262965 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
TCF3-201ENST00000262965 UQCRHP07919 91 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 SIL1Q9H173 461 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
TCF3-201ENST00000262965 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
TCF3-201ENST00000262965 EIF4G3O43432 1585 aaKnown RBP16.24■□□□□ 0.19
TCF3-201ENST00000262965 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 SMC2O95347 1197 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
TCF3-201ENST00000262965 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
TCF3-201ENST00000262965 IGHDP01880 384 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
TCF3-201ENST00000262965 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 RAD21O60216 631 aa16.24■□□□□ 0.19
TCF3-201ENST00000262965 PSMA5P28066 241 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms