RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 ABCC1P33527 1531 aa18.66■□□□□ 0.58
XRCC1-201ENST00000262887 TERF1P54274 439 aa18.65■□□□□ 0.58
XRCC1-201ENST00000262887 NUCB1Q02818 461 aa18.65■□□□□ 0.58
XRCC1-201ENST00000262887 TMEM57Q8N5G2 664 aa18.65■□□□□ 0.58
XRCC1-201ENST00000262887 NOB1Q9ULX3 412 aaKnown RBP18.65■□□□□ 0.58
XRCC1-201ENST00000262887 IBTKQ9P2D0 1353 aaPredicted RBP18.64■□□□□ 0.57
XRCC1-201ENST00000262887 ZBTB40Q9NUA8 1239 aa18.64■□□□□ 0.57
XRCC1-201ENST00000262887 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 ADGRL1O94910 1474 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 K7ELQ4 463 aaPredicted RBP18.63■□□□□ 0.57
XRCC1-201ENST00000262887 CHD1LQ86WJ1 897 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 KIF2CQ99661 725 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
XRCC1-201ENST00000262887 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
XRCC1-201ENST00000262887 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
XRCC1-201ENST00000262887 SSFA2P28290 1259 aa18.62■□□□□ 0.57
XRCC1-201ENST00000262887 RIPK4P57078 832 aa18.62■□□□□ 0.57
XRCC1-201ENST00000262887 BMP2KLQ5H9B9 411 aa18.62■□□□□ 0.57
XRCC1-201ENST00000262887 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
XRCC1-201ENST00000262887 DEPDC5O75140 1603 aa18.62■□□□□ 0.57
XRCC1-201ENST00000262887 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
XRCC1-201ENST00000262887 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
XRCC1-201ENST00000262887 CLEC17AQ6ZS10 378 aa18.6■□□□□ 0.57
XRCC1-201ENST00000262887 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
XRCC1-201ENST00000262887 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
XRCC1-201ENST00000262887 ABCC11Q96J66 1382 aa18.59■□□□□ 0.57
XRCC1-201ENST00000262887 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
XRCC1-201ENST00000262887 USP32Q8NFA0 1604 aa18.59■□□□□ 0.57
XRCC1-201ENST00000262887 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
XRCC1-201ENST00000262887 HS1BP3Q53T59 392 aa18.59■□□□□ 0.57
XRCC1-201ENST00000262887 OSCARQ8IYS5 282 aa18.58■□□□□ 0.57
XRCC1-201ENST00000262887 BAG4O95429 457 aaKnown RBP18.58■□□□□ 0.56
XRCC1-201ENST00000262887 PDE4CQ08493 712 aa18.58■□□□□ 0.56
XRCC1-201ENST00000262887 R3HCC1Q9Y3T6 440 aaKnown RBP18.58■□□□□ 0.56
XRCC1-201ENST00000262887 NOS1P29475 1434 aa18.58■□□□□ 0.56
XRCC1-201ENST00000262887 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
XRCC1-201ENST00000262887 GAS2L2Q8NHY3 880 aa18.57■□□□□ 0.56
XRCC1-201ENST00000262887 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
XRCC1-201ENST00000262887 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
XRCC1-201ENST00000262887 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
XRCC1-201ENST00000262887 CD109Q6YHK3 1445 aa18.57■□□□□ 0.56
XRCC1-201ENST00000262887 TRIM35Q9UPQ4 493 aa18.57■□□□□ 0.56
XRCC1-201ENST00000262887 KIF3BO15066 747 aa18.56■□□□□ 0.56
XRCC1-201ENST00000262887 ZNF445P59923 1031 aa18.56■□□□□ 0.56
XRCC1-201ENST00000262887 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
XRCC1-201ENST00000262887 FAM13BQ9NYF5 915 aa18.56■□□□□ 0.56
XRCC1-201ENST00000262887 KIF1BO60333 1816 aa18.56■□□□□ 0.56
XRCC1-201ENST00000262887 NRXN1Q9ULB1 1477 aa18.55■□□□□ 0.56
XRCC1-201ENST00000262887 IFT172Q9UG01 1749 aa18.55■□□□□ 0.56
XRCC1-201ENST00000262887 TBC1D9Q6ZT07 1266 aa18.55■□□□□ 0.56
XRCC1-201ENST00000262887 QRICH2Q9H0J4 1663 aa18.55■□□□□ 0.56
XRCC1-201ENST00000262887 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
XRCC1-201ENST00000262887 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
XRCC1-201ENST00000262887 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
XRCC1-201ENST00000262887 ZNF500O60304 480 aaPredicted RBP18.54■□□□□ 0.56
XRCC1-201ENST00000262887 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
XRCC1-201ENST00000262887 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
XRCC1-201ENST00000262887 NSD2O96028 1365 aa18.54■□□□□ 0.56
XRCC1-201ENST00000262887 ARHGAP31Q2M1Z3 1444 aa18.54■□□□□ 0.56
XRCC1-201ENST00000262887 IL16Q14005 1332 aa18.53■□□□□ 0.56
XRCC1-201ENST00000262887 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
XRCC1-201ENST00000262887 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
XRCC1-201ENST00000262887 GCC1Q96CN9 775 aa18.52■□□□□ 0.56
XRCC1-201ENST00000262887 AK9Q5TCS8 1911 aa18.52■□□□□ 0.56
XRCC1-201ENST00000262887 INO80Q9ULG1 1556 aaPredicted RBP18.52■□□□□ 0.56
XRCC1-201ENST00000262887 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.55
XRCC1-201ENST00000262887 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.55
XRCC1-201ENST00000262887 ZSCAN23Q3MJ62 389 aa18.51■□□□□ 0.55
XRCC1-201ENST00000262887 MCTP1Q6DN14 999 aa18.51■□□□□ 0.55
XRCC1-201ENST00000262887 CAVIN1Q6NZI2 390 aaKnown RBP18.51■□□□□ 0.55
XRCC1-201ENST00000262887 ANKRD36BQ8N2N9 1353 aa18.51■□□□□ 0.55
XRCC1-201ENST00000262887 UQCRHLA0A096LP55 91 aa18.51■□□□□ 0.55
XRCC1-201ENST00000262887 UQCRHP07919 91 aa18.51■□□□□ 0.55
XRCC1-201ENST00000262887 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
XRCC1-201ENST00000262887 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
XRCC1-201ENST00000262887 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
XRCC1-201ENST00000262887 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
XRCC1-201ENST00000262887 RBSNQ9H1K0 784 aa18.5■□□□□ 0.55
XRCC1-201ENST00000262887 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.5■□□□□ 0.55
XRCC1-201ENST00000262887 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
XRCC1-201ENST00000262887 NUCB2P80303 420 aa18.49■□□□□ 0.55
XRCC1-201ENST00000262887 CSPP1Q1MSJ5 1256 aa18.48■□□□□ 0.55
XRCC1-201ENST00000262887 MTERF4Q7Z6M4 381 aaKnown RBP18.48■□□□□ 0.55
XRCC1-201ENST00000262887 C1orf115Q9H7X2 142 aa18.48■□□□□ 0.55
XRCC1-201ENST00000262887 CDC45O75419 566 aa18.48■□□□□ 0.55
XRCC1-201ENST00000262887 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
XRCC1-201ENST00000262887 LMBRD1Q9NUN5 540 aa18.48■□□□□ 0.55
XRCC1-201ENST00000262887 ATP7AQ04656 1500 aa18.47■□□□□ 0.55
XRCC1-201ENST00000262887 MED14O60244 1454 aa18.47■□□□□ 0.55
XRCC1-201ENST00000262887 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
XRCC1-201ENST00000262887 CHMP4BQ9H444 224 aaKnown RBP18.47■□□□□ 0.55
XRCC1-201ENST00000262887 ZKSCAN5Q9Y2L8 839 aa18.47■□□□□ 0.55
XRCC1-201ENST00000262887 DYNC1I1O14576 645 aa18.46■□□□□ 0.55
XRCC1-201ENST00000262887 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
XRCC1-201ENST00000262887 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
XRCC1-201ENST00000262887 MCM5P33992 734 aa18.45■□□□□ 0.54
XRCC1-201ENST00000262887 PRIM1P49642 420 aaKnown RBP18.45■□□□□ 0.54
XRCC1-201ENST00000262887 RABEP1Q15276 862 aa18.45■□□□□ 0.54
XRCC1-201ENST00000262887 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms