RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 IL27Q8NEV9 243 aa21.43■■□□□ 1.02
PDE4C-201ENST00000262805 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
PDE4C-201ENST00000262805 EXOSC9Q06265 439 aaKnown RBP21.41■■□□□ 1.02
PDE4C-201ENST00000262805 FBXO31Q5XUX0 539 aaPredicted RBP21.41■■□□□ 1.02
PDE4C-201ENST00000262805 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
PDE4C-201ENST00000262805 FRAT2O75474 233 aaPredicted RBP21.41■■□□□ 1.02
PDE4C-201ENST00000262805 MVPQ14764 893 aaKnown RBP21.41■■□□□ 1.02
PDE4C-201ENST00000262805 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.01
PDE4C-201ENST00000262805 ZKSCAN2Q63HK3 967 aa21.39■■□□□ 1.01
PDE4C-201ENST00000262805 YTHDC2Q9H6S0 1430 aaKnown RBP21.39■■□□□ 1.01
PDE4C-201ENST00000262805 POGKQ9P215 609 aa21.38■■□□□ 1.01
PDE4C-201ENST00000262805 ANKRD26Q9UPS8 1709 aa21.38■■□□□ 1.01
PDE4C-201ENST00000262805 AAMPQ13685 434 aa21.38■■□□□ 1.01
PDE4C-201ENST00000262805 GSE1Q14687 1217 aa21.38■■□□□ 1.01
PDE4C-201ENST00000262805 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
PDE4C-201ENST00000262805 DZIP1LQ8IYY4 767 aaKnown RBP21.37■■□□□ 1.01
PDE4C-201ENST00000262805 SSH1Q8WYL5 1049 aa21.37■■□□□ 1.01
PDE4C-201ENST00000262805 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
PDE4C-201ENST00000262805 TRIM27P14373 513 aa21.36■■□□□ 1.01
PDE4C-201ENST00000262805 FBLN1P23142 703 aa21.36■■□□□ 1.01
PDE4C-201ENST00000262805 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
PDE4C-201ENST00000262805 CLTCQ00610 1675 aaKnown RBP21.36■■□□□ 1.01
PDE4C-201ENST00000262805 RWDD1Q9H446 243 aaPredicted RBP21.36■■□□□ 1.01
PDE4C-201ENST00000262805 TERF2IPQ9NYB0 399 aa21.36■■□□□ 1.01
PDE4C-201ENST00000262805 CDK19Q9BWU1 502 aa21.34■■□□□ 1.01
PDE4C-201ENST00000262805 CABP1Q9NZU7 370 aa21.34■■□□□ 1.01
PDE4C-201ENST00000262805 ALKQ9UM73 1620 aa21.33■■□□□ 1.01
PDE4C-201ENST00000262805 RIPK4P57078 832 aa21.33■■□□□ 1.01
PDE4C-201ENST00000262805 MED14O60244 1454 aa21.32■■□□□ 1
PDE4C-201ENST00000262805 DIAPH1O60610 1272 aaKnown RBP21.31■■□□□ 1
PDE4C-201ENST00000262805 NOB1Q9ULX3 412 aaKnown RBP21.31■■□□□ 1
PDE4C-201ENST00000262805 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
PDE4C-201ENST00000262805 CT47B1P0C2W7 299 aaPredicted RBP21.31■■□□□ 1
PDE4C-201ENST00000262805 ITPRIPQ8IWB1 547 aa21.31■■□□□ 1
PDE4C-201ENST00000262805 RTN4Q9NQC3 1192 aaKnown RBP21.3■■□□□ 1
PDE4C-201ENST00000262805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.3■■□□□ 1
PDE4C-201ENST00000262805 TBC1D32Q96NH3 1257 aa21.3■■□□□ 1
PDE4C-201ENST00000262805 SLKQ9H2G2 1235 aaPredicted RBP21.3■■□□□ 1
PDE4C-201ENST00000262805 KIF20BQ96Q89 1820 aa21.3■■□□□ 1
PDE4C-201ENST00000262805 PNPLA6Q8IY17 1366 aa21.3■■□□□ 1
PDE4C-201ENST00000262805 ATF7IPQ6VMQ6 1270 aa21.29■■□□□ 1
PDE4C-201ENST00000262805 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
PDE4C-201ENST00000262805 WAPLQ7Z5K2 1190 aa21.29■■□□□ 1
PDE4C-201ENST00000262805 ZMYM3Q14202 1370 aa21.28■■□□□ 1
PDE4C-201ENST00000262805 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
PDE4C-201ENST00000262805 BRPF3Q9ULD4 1205 aa21.28■■□□□ 1
PDE4C-201ENST00000262805 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
PDE4C-201ENST00000262805 IL16Q14005 1332 aa21.26■□□□□ 0.99
PDE4C-201ENST00000262805 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
PDE4C-201ENST00000262805 BECN1Q14457 450 aa21.25■□□□□ 0.99
PDE4C-201ENST00000262805 DDX19BQ9UMR2 479 aa21.25■□□□□ 0.99
PDE4C-201ENST00000262805 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
PDE4C-201ENST00000262805 HDAC1Q13547 482 aaPredicted RBP21.24■□□□□ 0.99
PDE4C-201ENST00000262805 TBC1D2Q9BYX2 928 aa21.24■□□□□ 0.99
PDE4C-201ENST00000262805 POLKQ9UBT6 870 aa21.24■□□□□ 0.99
PDE4C-201ENST00000262805 UPF2Q9HAU5 1272 aaKnown RBP21.23■□□□□ 0.99
PDE4C-201ENST00000262805 RSPH6AQ9H0K4 717 aa21.23■□□□□ 0.99
PDE4C-201ENST00000262805 THUMPD2Q9BTF0 503 aaKnown RBP21.22■□□□□ 0.99
PDE4C-201ENST00000262805 ANTXR1Q9H6X2 564 aa21.22■□□□□ 0.99
PDE4C-201ENST00000262805 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
PDE4C-201ENST00000262805 ZBTB40Q9NUA8 1239 aa21.22■□□□□ 0.99
PDE4C-201ENST00000262805 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
PDE4C-201ENST00000262805 HMOX1P09601 288 aa21.21■□□□□ 0.99
PDE4C-201ENST00000262805 FAM135BQ49AJ0 1406 aa21.21■□□□□ 0.99
PDE4C-201ENST00000262805 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
PDE4C-201ENST00000262805 FCHSD2O94868 740 aa21.2■□□□□ 0.98
PDE4C-201ENST00000262805 SMC5Q8IY18 1101 aa21.19■□□□□ 0.98
PDE4C-201ENST00000262805 MFAP1P55081 439 aaKnown RBP21.19■□□□□ 0.98
PDE4C-201ENST00000262805 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
PDE4C-201ENST00000262805 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
PDE4C-201ENST00000262805 SETD1AO15047 1707 aaKnown RBP21.19■□□□□ 0.98
PDE4C-201ENST00000262805 SPRYD3Q8NCJ5 442 aa21.18■□□□□ 0.98
PDE4C-201ENST00000262805 A2ML1A8K2U0 1454 aa21.18■□□□□ 0.98
PDE4C-201ENST00000262805 KIF16BQ96L93 1317 aa21.18■□□□□ 0.98
PDE4C-201ENST00000262805 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
PDE4C-201ENST00000262805 NME9Q86XW9 330 aa21.16■□□□□ 0.98
PDE4C-201ENST00000262805 NCKAP5LQ9HCH0 1330 aa21.16■□□□□ 0.98
PDE4C-201ENST00000262805 TSPYL6Q8N831 410 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 ATP7BP35670 1465 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 C22orf23Q9BZE7 217 aa21.15■□□□□ 0.98
PDE4C-201ENST00000262805 DLC1Q96QB1 1528 aa21.14■□□□□ 0.98
PDE4C-201ENST00000262805 IPO8O15397 1037 aaKnown RBP21.14■□□□□ 0.98
PDE4C-201ENST00000262805 MLECQ14165 292 aa21.14■□□□□ 0.98
PDE4C-201ENST00000262805 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
PDE4C-201ENST00000262805 NFE2L2Q16236 605 aa21.13■□□□□ 0.97
PDE4C-201ENST00000262805 LNPKQ9C0E8 428 aa21.13■□□□□ 0.97
PDE4C-201ENST00000262805 VAMP4O75379 141 aa21.12■□□□□ 0.97
PDE4C-201ENST00000262805 NUCB1Q02818 461 aa21.12■□□□□ 0.97
PDE4C-201ENST00000262805 C1orf115Q9H7X2 142 aa21.12■□□□□ 0.97
PDE4C-201ENST00000262805 IL13P35225 146 aa21.11■□□□□ 0.97
PDE4C-201ENST00000262805 PPIP5K1Q6PFW1 1433 aa21.11■□□□□ 0.97
PDE4C-201ENST00000262805 CPSF1Q10570 1443 aaKnown RBP21.11■□□□□ 0.97
PDE4C-201ENST00000262805 METP08581 1390 aa21.1■□□□□ 0.97
PDE4C-201ENST00000262805 NRXN3Q9Y4C0 1643 aa21.1■□□□□ 0.97
PDE4C-201ENST00000262805 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
PDE4C-201ENST00000262805 MRPL50Q8N5N7 158 aaKnown RBP21.1■□□□□ 0.97
PDE4C-201ENST00000262805 SPATA31D1Q6ZQQ2 1576 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms