RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 AKAP12Q02952 1782 aa22.96■■□□□ 1.27
CHCHD3-201ENST00000262570 PAK3O75914 559 aaPredicted RBP22.95■■□□□ 1.26
CHCHD3-201ENST00000262570 CARD14Q9BXL6 1004 aa22.95■■□□□ 1.26
CHCHD3-201ENST00000262570 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
CHCHD3-201ENST00000262570 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
CHCHD3-201ENST00000262570 EDC4Q6P2E9 1401 aaKnown RBP22.94■■□□□ 1.26
CHCHD3-201ENST00000262570 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
CHCHD3-201ENST00000262570 MON2Q7Z3U7 1717 aa22.93■■□□□ 1.26
CHCHD3-201ENST00000262570 TTC21AQ8NDW8 1320 aa22.91■■□□□ 1.26
CHCHD3-201ENST00000262570 ILDR1Q86SU0 546 aaPredicted RBP22.91■■□□□ 1.26
CHCHD3-201ENST00000262570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.269e-7■■■■□ 19.7
CHCHD3-201ENST00000262570 NRKQ7Z2Y5 1582 aa22.9■■□□□ 1.26
CHCHD3-201ENST00000262570 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.26
CHCHD3-201ENST00000262570 ABTB2Q8N961 1025 aa22.89■■□□□ 1.26
CHCHD3-201ENST00000262570 ARHGEF10O15013 1369 aa22.89■■□□□ 1.25
CHCHD3-201ENST00000262570 JCADQ9P266 1359 aa22.89■■□□□ 1.25
CHCHD3-201ENST00000262570 NSD3Q9BZ95 1437 aa22.88■■□□□ 1.25
CHCHD3-201ENST00000262570 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
CHCHD3-201ENST00000262570 ALS2Q96Q42 1657 aa22.87■■□□□ 1.25
CHCHD3-201ENST00000262570 PER1O15534 1290 aaPredicted RBP22.87■■□□□ 1.25
CHCHD3-201ENST00000262570 NME9Q86XW9 330 aa22.85■■□□□ 1.25
CHCHD3-201ENST00000262570 FYB1O15117 783 aa22.84■■□□□ 1.25
CHCHD3-201ENST00000262570 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
CHCHD3-201ENST00000262570 NUTM2GQ5VZR2 741 aa22.84■■□□□ 1.25
CHCHD3-201ENST00000262570 NLRP6P59044 892 aa22.84■■□□□ 1.25
CHCHD3-201ENST00000262570 KNSTRNQ9Y448 316 aa22.84■■□□□ 1.25
CHCHD3-201ENST00000262570 CGNL1Q0VF96 1302 aa22.83■■□□□ 1.25
CHCHD3-201ENST00000262570 NLRP13Q86W25 1043 aa22.83■■□□□ 1.25
CHCHD3-201ENST00000262570 USP31Q70CQ4 1352 aa22.83■■□□□ 1.24
CHCHD3-201ENST00000262570 PIK3C2AO00443 1686 aa22.82■■□□□ 1.24
CHCHD3-201ENST00000262570 ZRANB1Q9UGI0 708 aa22.82■■□□□ 1.24
CHCHD3-201ENST00000262570 SHPRHQ149N8 1683 aa22.82■■□□□ 1.24
CHCHD3-201ENST00000262570 COL22A1Q8NFW1 1626 aaPredicted RBP22.81■■□□□ 1.24
CHCHD3-201ENST00000262570 SPATA31A6Q5VVP1 1343 aa22.8■■□□□ 1.24
CHCHD3-201ENST00000262570 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
CHCHD3-201ENST00000262570 GGNBP2Q9H3C7 697 aa22.8■■□□□ 1.24
CHCHD3-201ENST00000262570 USP19O94966 1318 aa22.79■■□□□ 1.24
CHCHD3-201ENST00000262570 AMER1Q5JTC6 1135 aaPredicted RBP22.79■■□□□ 1.24
CHCHD3-201ENST00000262570 MED1Q15648 1581 aaPredicted RBP22.78■■□□□ 1.24
CHCHD3-201ENST00000262570 OVOS2A0A0J9YW53 1432 aa22.77■■□□□ 1.24
CHCHD3-201ENST00000262570 OVOS2Q6IE36 1432 aa22.77■■□□□ 1.24
CHCHD3-201ENST00000262570 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
CHCHD3-201ENST00000262570 COG3Q96JB2 828 aa22.77■■□□□ 1.24
CHCHD3-201ENST00000262570 GCP02774 474 aa22.75■■□□□ 1.23
CHCHD3-201ENST00000262570 NSD2O96028 1365 aa22.74■■□□□ 1.23
CHCHD3-201ENST00000262570 USP54Q70EL1 1684 aa22.74■■□□□ 1.23
CHCHD3-201ENST00000262570 NPC1L1Q9UHC9 1359 aa22.74■■□□□ 1.23
CHCHD3-201ENST00000262570 NUTM2BA6NNL0 878 aaPredicted RBP22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 NUTM2EB1AL46 878 aaPredicted RBP22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 NUTM2AQ8IVF1 878 aaPredicted RBP22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 SLIT3O75094 1523 aa22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 MARF1Q9Y4F3 1742 aaKnown RBP22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
CHCHD3-201ENST00000262570 HAP1P54257 671 aaPredicted RBP22.72■■□□□ 1.23
CHCHD3-201ENST00000262570 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
CHCHD3-201ENST00000262570 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
CHCHD3-201ENST00000262570 LRP6O75581 1613 aa22.7■■□□□ 1.22
CHCHD3-201ENST00000262570 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
CHCHD3-201ENST00000262570 PHRF1Q9P1Y6 1649 aaKnown RBP22.69■■□□□ 1.22
CHCHD3-201ENST00000262570 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
CHCHD3-201ENST00000262570 SOX12O15370 315 aa22.68■■□□□ 1.22
CHCHD3-201ENST00000262570 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
CHCHD3-201ENST00000262570 ZC3H6P61129 1189 aaKnown RBP22.67■■□□□ 1.22
CHCHD3-201ENST00000262570 MORC1Q86VD1 984 aa22.67■■□□□ 1.22
CHCHD3-201ENST00000262570 CPDO75976 1380 aa22.66■■□□□ 1.22
CHCHD3-201ENST00000262570 NFAT5O94916 1531 aa22.66■■□□□ 1.22
CHCHD3-201ENST00000262570 FBLN1P23142 703 aa22.66■■□□□ 1.22
CHCHD3-201ENST00000262570 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
CHCHD3-201ENST00000262570 KIAA0232Q92628 1395 aa22.65■■□□□ 1.22
CHCHD3-201ENST00000262570 CNGB1Q14028 1251 aaPredicted RBP22.64■■□□□ 1.22
CHCHD3-201ENST00000262570 ANKRD26Q9UPS8 1709 aa22.64■■□□□ 1.22
CHCHD3-201ENST00000262570 FAM83GA6ND36 823 aa22.63■■□□□ 1.21
CHCHD3-201ENST00000262570 PRDM11Q9NQV5 511 aa22.63■■□□□ 1.21
CHCHD3-201ENST00000262570 AATKQ6ZMQ8 1374 aa22.62■■□□□ 1.21
CHCHD3-201ENST00000262570 TNNT2P45379 298 aaPredicted RBP22.62■■□□□ 1.21
CHCHD3-201ENST00000262570 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
CHCHD3-201ENST00000262570 RRS1Q15050 365 aaKnown RBP22.6■■□□□ 1.21
CHCHD3-201ENST00000262570 CHRNA2Q15822 529 aa22.6■■□□□ 1.21
CHCHD3-201ENST00000262570 C8orf37Q96NL8 207 aa22.6■■□□□ 1.21
CHCHD3-201ENST00000262570 MAP3K19Q56UN5 1328 aa22.6■■□□□ 1.21
CHCHD3-201ENST00000262570 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
CHCHD3-201ENST00000262570 ZBTB7CA1YPR0 619 aa22.58■■□□□ 1.2
CHCHD3-201ENST00000262570 POLKQ9UBT6 870 aa22.58■■□□□ 1.2
CHCHD3-201ENST00000262570 PARD3Q8TEW0 1356 aa22.57■■□□□ 1.2
CHCHD3-201ENST00000262570 FNBP4Q8N3X1 1017 aaPredicted RBP22.57■■□□□ 1.2
CHCHD3-201ENST00000262570 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
CHCHD3-201ENST00000262570 AXIN2Q9Y2T1 843 aa22.55■■□□□ 1.2
CHCHD3-201ENST00000262570 AMPHP49418 695 aa22.55■■□□□ 1.2
CHCHD3-201ENST00000262570 RALBP1Q15311 655 aa22.55■■□□□ 1.2
CHCHD3-201ENST00000262570 IP6K1Q92551 441 aa22.55■■□□□ 1.2
CHCHD3-201ENST00000262570 SLIT2O94813 1529 aa22.54■■□□□ 1.2
CHCHD3-201ENST00000262570 COL14A1Q05707 1796 aaKnown RBP22.54■■□□□ 1.2
CHCHD3-201ENST00000262570 BTG4Q9NY30 223 aa22.54■■□□□ 1.2
CHCHD3-201ENST00000262570 KIF24Q5T7B8 1368 aa22.53■■□□□ 1.2
CHCHD3-201ENST00000262570 HOXC9P31274 260 aa22.53■■□□□ 1.2
CHCHD3-201ENST00000262570 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
CHCHD3-201ENST00000262570 LTN1O94822 1766 aa22.53■■□□□ 1.2
CHCHD3-201ENST00000262570 ABCC6O95255 1503 aa22.52■■□□□ 1.2
CHCHD3-201ENST00000262570 LMO7Q8WWI1 1683 aa22.52■■□□□ 1.2
CHCHD3-201ENST00000262570 COL18A1P39060 1754 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms