RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 CHD1LQ86WJ1 897 aa16.58■□□□□ 0.24
PGBD1-201ENST00000259883 RTEL1-TNFRSF6BF6WH68 1400 aa16.57■□□□□ 0.24
PGBD1-201ENST00000259883 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
PGBD1-201ENST00000259883 NPATQ14207 1427 aa16.57■□□□□ 0.24
PGBD1-201ENST00000259883 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
PGBD1-201ENST00000259883 TNPO1Q92973 898 aaKnown RBP16.57■□□□□ 0.24
PGBD1-201ENST00000259883 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
PGBD1-201ENST00000259883 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
PGBD1-201ENST00000259883 PLEKHF1Q96S99 279 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 EMILIN1Q9Y6C2 1016 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
PGBD1-201ENST00000259883 CCDC27Q2M243 656 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 TERF2IPQ9NYB0 399 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 MROH2AA6NES4 1674 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 TET3O43151 1660 aa16.56■□□□□ 0.24
PGBD1-201ENST00000259883 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
PGBD1-201ENST00000259883 NCKAP5LQ9HCH0 1330 aa16.55■□□□□ 0.24
PGBD1-201ENST00000259883 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
PGBD1-201ENST00000259883 KRT24Q2M2I5 525 aa16.55■□□□□ 0.24
PGBD1-201ENST00000259883 CDK19Q9BWU1 502 aa16.55■□□□□ 0.24
PGBD1-201ENST00000259883 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
PGBD1-201ENST00000259883 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
PGBD1-201ENST00000259883 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
PGBD1-201ENST00000259883 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
PGBD1-201ENST00000259883 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
PGBD1-201ENST00000259883 SSFA2P28290 1259 aa16.53■□□□□ 0.24
PGBD1-201ENST00000259883 HDAC1Q13547 482 aaPredicted RBP16.53■□□□□ 0.24
PGBD1-201ENST00000259883 IQSEC2Q5JU85 1478 aa16.53■□□□□ 0.24
PGBD1-201ENST00000259883 CHAMP1Q96JM3 812 aa16.53■□□□□ 0.24
PGBD1-201ENST00000259883 GRPEL1Q9HAV7 217 aa16.53■□□□□ 0.24
PGBD1-201ENST00000259883 KIF1BO60333 1816 aa16.53■□□□□ 0.24
PGBD1-201ENST00000259883 PLPPR3Q6T4P5 718 aa16.52■□□□□ 0.24
PGBD1-201ENST00000259883 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.24
PGBD1-201ENST00000259883 NUCB1Q02818 461 aa16.52■□□□□ 0.24
PGBD1-201ENST00000259883 NOL8Q76FK4 1167 aaKnown RBP16.52■□□□□ 0.24
PGBD1-201ENST00000259883 TRIM44Q96DX7 344 aaPredicted RBP16.52■□□□□ 0.24
PGBD1-201ENST00000259883 SHPRHQ149N8 1683 aa16.52■□□□□ 0.23
PGBD1-201ENST00000259883 TBC1D9Q6ZT07 1266 aa16.52■□□□□ 0.23
PGBD1-201ENST00000259883 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
PGBD1-201ENST00000259883 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
PGBD1-201ENST00000259883 MYOM2P54296 1465 aa16.51■□□□□ 0.23
PGBD1-201ENST00000259883 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
PGBD1-201ENST00000259883 FOXD4L6Q3SYB3 417 aaPredicted RBP16.51■□□□□ 0.23
PGBD1-201ENST00000259883 FOXD4L3Q6VB84 417 aaPredicted RBP16.51■□□□□ 0.23
PGBD1-201ENST00000259883 NME9Q86XW9 330 aa16.5■□□□□ 0.23
PGBD1-201ENST00000259883 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
PGBD1-201ENST00000259883 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
PGBD1-201ENST00000259883 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
PGBD1-201ENST00000259883 AAMPQ13685 434 aa16.49■□□□□ 0.23
PGBD1-201ENST00000259883 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
PGBD1-201ENST00000259883 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
PGBD1-201ENST00000259883 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
PGBD1-201ENST00000259883 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
PGBD1-201ENST00000259883 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
PGBD1-201ENST00000259883 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
PGBD1-201ENST00000259883 EFCAB6Q5THR3 1501 aa16.48■□□□□ 0.23
PGBD1-201ENST00000259883 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
PGBD1-201ENST00000259883 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
PGBD1-201ENST00000259883 SIRT2Q8IXJ6 389 aa16.47■□□□□ 0.23
PGBD1-201ENST00000259883 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
PGBD1-201ENST00000259883 DDX49Q9Y6V7 483 aaKnown RBP16.47■□□□□ 0.23
PGBD1-201ENST00000259883 MRE11P49959 708 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 TSHZ3Q63HK5 1081 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 GBP4Q96PP9 640 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 ARID3AQ99856 593 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 ZNF692Q9BU19 519 aaPredicted RBP16.46■□□□□ 0.23
PGBD1-201ENST00000259883 ERBB4Q15303 1308 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 FSD2A1L4K1 749 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
PGBD1-201ENST00000259883 SLC4A10Q6U841 1118 aa16.46■□□□□ 0.23
PGBD1-201ENST00000259883 TULP4Q9NRJ4 1543 aa16.46■□□□□ 0.22
PGBD1-201ENST00000259883 VAMP4O75379 141 aa16.45■□□□□ 0.22
PGBD1-201ENST00000259883 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
PGBD1-201ENST00000259883 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
PGBD1-201ENST00000259883 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
PGBD1-201ENST00000259883 PKP1Q13835 747 aa16.45■□□□□ 0.22
PGBD1-201ENST00000259883 MROH1Q8NDA8 1641 aa16.44■□□□□ 0.22
PGBD1-201ENST00000259883 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
PGBD1-201ENST00000259883 AEBP1Q8IUX7 1158 aa16.43■□□□□ 0.22
PGBD1-201ENST00000259883 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
PGBD1-201ENST00000259883 KIF2CQ99661 725 aa16.43■□□□□ 0.22
PGBD1-201ENST00000259883 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
PGBD1-201ENST00000259883 K7ELQ4 463 aaPredicted RBP16.43■□□□□ 0.22
PGBD1-201ENST00000259883 MCM10Q7L590 875 aa16.43■□□□□ 0.22
PGBD1-201ENST00000259883 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
PGBD1-201ENST00000259883 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
PGBD1-201ENST00000259883 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
PGBD1-201ENST00000259883 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
PGBD1-201ENST00000259883 ESPNB1AK53 854 aa16.42■□□□□ 0.22
PGBD1-201ENST00000259883 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
PGBD1-201ENST00000259883 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
PGBD1-201ENST00000259883 ADGRB1O14514 1584 aa16.42■□□□□ 0.22
PGBD1-201ENST00000259883 INO80Q9ULG1 1556 aaPredicted RBP16.42■□□□□ 0.22
PGBD1-201ENST00000259883 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
PGBD1-201ENST00000259883 FCHSD2O94868 740 aa16.41■□□□□ 0.22
PGBD1-201ENST00000259883 GSPT1P15170 499 aaKnown RBP16.41■□□□□ 0.22
PGBD1-201ENST00000259883 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
PGBD1-201ENST00000259883 MPNDQ8N594 471 aa16.41■□□□□ 0.22
PGBD1-201ENST00000259883 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
PGBD1-201ENST00000259883 RPGRIP1LQ68CZ1 1315 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms