RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 H3BQV1 296 aa13.21□□□□□ -0.29
URB2-201ENST00000258243 CCDC27Q2M243 656 aa13.21□□□□□ -0.29
URB2-201ENST00000258243 IFFO2Q5TF58 517 aa13.21□□□□□ -0.29
URB2-201ENST00000258243 WWC1Q8IX03 1113 aa13.21□□□□□ -0.3
URB2-201ENST00000258243 IL27Q8NEV9 243 aa13.21□□□□□ -0.3
URB2-201ENST00000258243 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.3
URB2-201ENST00000258243 ERC2O15083 957 aa13.21□□□□□ -0.3
URB2-201ENST00000258243 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.3
URB2-201ENST00000258243 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.3
URB2-201ENST00000258243 FBXO31Q5XUX0 539 aaPredicted RBP13.2□□□□□ -0.3
URB2-201ENST00000258243 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
URB2-201ENST00000258243 ERICH2A1L162 156 aa13.2□□□□□ -0.3
URB2-201ENST00000258243 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
URB2-201ENST00000258243 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
URB2-201ENST00000258243 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
URB2-201ENST00000258243 ADAMTS2O95450 1211 aa13.19□□□□□ -0.3
URB2-201ENST00000258243 PPP2R1AP30153 589 aa13.19□□□□□ -0.3
URB2-201ENST00000258243 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
URB2-201ENST00000258243 TRIM29Q14134 588 aa13.18□□□□□ -0.3
URB2-201ENST00000258243 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
URB2-201ENST00000258243 RNF20Q5VTR2 975 aa13.18□□□□□ -0.3
URB2-201ENST00000258243 NGLY1Q96IV0 654 aa13.18□□□□□ -0.3
URB2-201ENST00000258243 BRPF3Q9ULD4 1205 aa13.18□□□□□ -0.3
URB2-201ENST00000258243 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 FYB1O15117 783 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
URB2-201ENST00000258243 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
URB2-201ENST00000258243 TNRQ92752 1358 aa13.17□□□□□ -0.3
URB2-201ENST00000258243 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
URB2-201ENST00000258243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
URB2-201ENST00000258243 GNAI3P08754 354 aa13.16□□□□□ -0.3
URB2-201ENST00000258243 SAMD1Q6SPF0 538 aaPredicted RBP13.16□□□□□ -0.3
URB2-201ENST00000258243 TBC1D2BQ9UPU7 963 aa13.16□□□□□ -0.3
URB2-201ENST00000258243 REC8O95072 547 aa13.16□□□□□ -0.3
URB2-201ENST00000258243 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
URB2-201ENST00000258243 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
URB2-201ENST00000258243 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
URB2-201ENST00000258243 RRS1Q15050 365 aaKnown RBP13.15□□□□□ -0.3
URB2-201ENST00000258243 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
URB2-201ENST00000258243 FAM135AQ9P2D6 1515 aa13.15□□□□□ -0.3
URB2-201ENST00000258243 CPLX1O14810 134 aa13.15□□□□□ -0.3
URB2-201ENST00000258243 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
URB2-201ENST00000258243 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
URB2-201ENST00000258243 TOM1O60784 492 aa13.14□□□□□ -0.31
URB2-201ENST00000258243 PTPN23Q9H3S7 1636 aa13.14□□□□□ -0.31
URB2-201ENST00000258243 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
URB2-201ENST00000258243 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
URB2-201ENST00000258243 CWC15Q9P013 229 aaKnown RBP13.14□□□□□ -0.31
URB2-201ENST00000258243 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
URB2-201ENST00000258243 ABCC5O15440 1437 aa13.13□□□□□ -0.31
URB2-201ENST00000258243 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
URB2-201ENST00000258243 IDI1Q13907 227 aa13.13□□□□□ -0.31
URB2-201ENST00000258243 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
URB2-201ENST00000258243 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
URB2-201ENST00000258243 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
URB2-201ENST00000258243 MSH6P52701 1360 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 STARD3NLO95772 234 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 FOXO3O43524 673 aa13.12□□□□□ -0.31
URB2-201ENST00000258243 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
URB2-201ENST00000258243 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
URB2-201ENST00000258243 MYL6BP14649 208 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 TPM3P06753 285 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 MCTP1Q6DN14 999 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 RALYLQ86SE5 291 aaKnown RBP13.11□□□□□ -0.31
URB2-201ENST00000258243 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 NINLQ9Y2I6 1382 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
URB2-201ENST00000258243 ERC1Q8IUD2 1116 aa13.11□□□□□ -0.31
URB2-201ENST00000258243 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
URB2-201ENST00000258243 AAMPQ13685 434 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 NBPF8Q3BBV2 869 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
URB2-201ENST00000258243 PHF14O94880 888 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 SLC3A2P08195 630 aaKnown RBP13.1□□□□□ -0.31
URB2-201ENST00000258243 FAM13BQ9NYF5 915 aa13.1□□□□□ -0.31
URB2-201ENST00000258243 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 IKQ13123 557 aaPredicted RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 TPD52L1Q16890 204 aaPredicted RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 INTS3Q68E01 1043 aaKnown RBP13.09□□□□□ -0.31
URB2-201ENST00000258243 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms