RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TMPOP42166 694 aaKnown RBP28.11■■■□□ 2.09
CLN6-201ENST00000249806 SIRT1Q96EB6 747 aa28.11■■■□□ 2.09
CLN6-201ENST00000249806 CPSF1Q10570 1443 aaKnown RBP28.11■■■□□ 2.09
CLN6-201ENST00000249806 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
CLN6-201ENST00000249806 POLKQ9UBT6 870 aa28.11■■■□□ 2.09
CLN6-201ENST00000249806 TECPR2O15040 1411 aa28.11■■■□□ 2.09
CLN6-201ENST00000249806 PLPPR3Q6T4P5 718 aa28.1■■■□□ 2.09
CLN6-201ENST00000249806 CENPQQ7L2Z9 268 aaPredicted RBP28.1■■■□□ 2.09
CLN6-201ENST00000249806 PDE4AP27815 886 aa28.1■■■□□ 2.09
CLN6-201ENST00000249806 CANXP27824 592 aaKnown RBP28.1■■■□□ 2.09
CLN6-201ENST00000249806 FRAT1Q92837 279 aaPredicted RBP28.1■■■□□ 2.09
CLN6-201ENST00000249806 KNDC1Q76NI1 1749 aa28.09■■■□□ 2.09
CLN6-201ENST00000249806 MS4A1P11836 297 aa28.09■■■□□ 2.09
CLN6-201ENST00000249806 PDE3AQ14432 1141 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 NME9Q86XW9 330 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 PANK1Q8TE04 598 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 ZRANB1Q9UGI0 708 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 CCDC61Q9Y6R9 512 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 MAPK8IP3Q9UPT6 1336 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 ADAMTS13Q76LX8 1427 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 MYH16Q9H6N6 1097 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 TRIM35Q9UPQ4 493 aa28.08■■■□□ 2.09
CLN6-201ENST00000249806 ROBO2Q9HCK4 1378 aa28.07■■■□□ 2.08
CLN6-201ENST00000249806 BCL2L13Q9BXK5 485 aa28.07■■■□□ 2.08
CLN6-201ENST00000249806 MAP2P11137 1827 aaKnown RBP28.06■■■□□ 2.08
CLN6-201ENST00000249806 CPS1P31327 1500 aa28.06■■■□□ 2.08
CLN6-201ENST00000249806 COG6Q9Y2V7 657 aa28.06■■■□□ 2.08
CLN6-201ENST00000249806 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
CLN6-201ENST00000249806 BACH2Q9BYV9 841 aa28.05■■■□□ 2.08
CLN6-201ENST00000249806 TSR2Q969E8 191 aaKnown RBP28.04■■■□□ 2.08
CLN6-201ENST00000249806 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
CLN6-201ENST00000249806 RIPK4P57078 832 aa28.03■■■□□ 2.08
CLN6-201ENST00000249806 SLC26A8Q96RN1 970 aa28.03■■■□□ 2.08
CLN6-201ENST00000249806 EMILIN1Q9Y6C2 1016 aa28.03■■■□□ 2.08
CLN6-201ENST00000249806 ANP32AP39687 249 aaKnown RBP28.02■■■□□ 2.08
CLN6-201ENST00000249806 ERICH6Q7L0X2 663 aa28.02■■■□□ 2.08
CLN6-201ENST00000249806 TNNQ9UQP3 1299 aa28.01■■■□□ 2.07
CLN6-201ENST00000249806 PLEKHG1Q9ULL1 1385 aa28.01■■■□□ 2.07
CLN6-201ENST00000249806 MYT1Q01538 1121 aa28■■■□□ 2.07
CLN6-201ENST00000249806 CDC42BPGQ6DT37 1551 aa28■■■□□ 2.07
CLN6-201ENST00000249806 FCHSD2O94868 740 aa27.99■■■□□ 2.07
CLN6-201ENST00000249806 PNNQ9H307 717 aaKnown RBP27.99■■■□□ 2.07
CLN6-201ENST00000249806 NUTM2FA1L443 756 aa27.98■■■□□ 2.07
CLN6-201ENST00000249806 RLBP1P12271 317 aa27.98■■■□□ 2.07
CLN6-201ENST00000249806 C3P01024 1663 aa27.97■■■□□ 2.07
CLN6-201ENST00000249806 IGHDP01880 384 aa27.97■■■□□ 2.07
CLN6-201ENST00000249806 PRKAR2BP31323 418 aa27.97■■■□□ 2.07
CLN6-201ENST00000249806 RSPH6AQ9H0K4 717 aa27.97■■■□□ 2.07
CLN6-201ENST00000249806 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.97■■■□□ 2.07
CLN6-201ENST00000249806 EXOSC9Q06265 439 aaKnown RBP27.96■■■□□ 2.07
CLN6-201ENST00000249806 COG3Q96JB2 828 aa27.96■■■□□ 2.07
CLN6-201ENST00000249806 EID1Q9Y6B2 187 aa27.96■■■□□ 2.07
CLN6-201ENST00000249806 HMOX1P09601 288 aa27.96■■■□□ 2.07
CLN6-201ENST00000249806 MON2Q7Z3U7 1717 aa27.96■■■□□ 2.07
CLN6-201ENST00000249806 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
CLN6-201ENST00000249806 CLUAP1Q96AJ1 413 aa27.96■■■□□ 2.07
CLN6-201ENST00000249806 LRRC7Q96NW7 1537 aa27.95■■■□□ 2.06
CLN6-201ENST00000249806 IPO9Q96P70 1041 aaKnown RBP27.95■■■□□ 2.06
CLN6-201ENST00000249806 RRS1Q15050 365 aaKnown RBP27.94■■■□□ 2.06
CLN6-201ENST00000249806 ZNF692Q9BU19 519 aaPredicted RBP27.94■■■□□ 2.06
CLN6-201ENST00000249806 PTPRUQ92729 1446 aa27.94■■■□□ 2.06
CLN6-201ENST00000249806 AKAP12Q02952 1782 aa27.93■■■□□ 2.06
CLN6-201ENST00000249806 PHACTR3Q96KR7 559 aa27.92■■■□□ 2.06
CLN6-201ENST00000249806 PAK3O75914 559 aaPredicted RBP27.92■■■□□ 2.06
CLN6-201ENST00000249806 IL13P35225 146 aa27.92■■■□□ 2.06
CLN6-201ENST00000249806 NOP58Q9Y2X3 529 aaKnown RBP27.92■■■□□ 2.06
CLN6-201ENST00000249806 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
CLN6-201ENST00000249806 AATKQ6ZMQ8 1374 aa27.91■■■□□ 2.06
CLN6-201ENST00000249806 IL16Q14005 1332 aa27.91■■■□□ 2.06
CLN6-201ENST00000249806 TRHP20396 242 aaPredicted RBP27.91■■■□□ 2.06
CLN6-201ENST00000249806 RGS3P49796 1198 aa27.9■■■□□ 2.06
CLN6-201ENST00000249806 AMOTL2Q9Y2J4 779 aa27.9■■■□□ 2.06
CLN6-201ENST00000249806 ACEP12821 1306 aa27.89■■■□□ 2.06
CLN6-201ENST00000249806 CT47B1P0C2W7 299 aaPredicted RBP27.89■■■□□ 2.06
CLN6-201ENST00000249806 FER1L4A9Z1Z3 1794 aa27.89■■■□□ 2.05
CLN6-201ENST00000249806 NEFMP07197 916 aa27.88■■■□□ 2.05
CLN6-201ENST00000249806 CDK12Q9NYV4 1490 aaPredicted RBP27.87■■■□□ 2.05
CLN6-201ENST00000249806 SLIT1O75093 1534 aa27.86■■■□□ 2.05
CLN6-201ENST00000249806 SMC4Q9NTJ3 1288 aa27.86■■■□□ 2.05
CLN6-201ENST00000249806 SSH1Q8WYL5 1049 aa27.86■■■□□ 2.05
CLN6-201ENST00000249806 ARHGAP23Q9P227 1491 aa27.85■■■□□ 2.05
CLN6-201ENST00000249806 TTC21BQ7Z4L5 1316 aa27.85■■■□□ 2.05
CLN6-201ENST00000249806 ZKSCAN2Q63HK3 967 aa27.85■■■□□ 2.05
CLN6-201ENST00000249806 TBX22Q9Y458 520 aa27.84■■■□□ 2.05
CLN6-201ENST00000249806 PCDHB15Q9Y5E8 787 aa27.84■■■□□ 2.05
CLN6-201ENST00000249806 PLEKHG3A1L390 1219 aa27.84■■■□□ 2.05
CLN6-201ENST00000249806 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
CLN6-201ENST00000249806 THEMISQ8N1K5 641 aaPredicted RBP27.84■■■□□ 2.05
CLN6-201ENST00000249806 THUMPD2Q9BTF0 503 aaKnown RBP27.82■■■□□ 2.04
CLN6-201ENST00000249806 LAS1LQ9Y4W2 734 aaKnown RBP27.82■■■□□ 2.04
CLN6-201ENST00000249806 ZBTB47Q9UFB7 747 aaPredicted RBP27.82■■■□□ 2.04
CLN6-201ENST00000249806 DZIP1LQ8IYY4 767 aaKnown RBP27.81■■■□□ 2.04
CLN6-201ENST00000249806 TOPAZ1Q8N9V7 1692 aa27.81■■■□□ 2.04
CLN6-201ENST00000249806 FTSJ3Q8IY81 847 aaKnown RBP27.8■■■□□ 2.04
CLN6-201ENST00000249806 MVPQ14764 893 aaKnown RBP27.8■■■□□ 2.04
CLN6-201ENST00000249806 C8orf34Q49A92 452 aa27.79■■■□□ 2.04
CLN6-201ENST00000249806 TRIM27P14373 513 aa27.79■■■□□ 2.04
CLN6-201ENST00000249806 AAMPQ13685 434 aa27.79■■■□□ 2.04
CLN6-201ENST00000249806 FAM161AQ3B820 660 aa27.78■■■□□ 2.04
CLN6-201ENST00000249806 PMFBP1Q8TBY8 1022 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms