RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 GBP2P32456 591 aaPredicted RBP8.86□□□□□ -0.99
MED28-201ENST00000237380 KCNH5Q8NCM2 988 aa8.86□□□□□ -0.99
MED28-201ENST00000237380 ZNHIT6Q9NWK9 470 aaKnown RBP8.85□□□□□ -0.99
MED28-201ENST00000237380 CLASRPQ8N2M8 674 aaKnown RBP8.85□□□□□ -0.99
MED28-201ENST00000237380 CABP4P57796 275 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 KIF4AO95239 1232 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 UBTFL1P0CB47 393 aaPredicted RBP8.85□□□□□ -0.99
MED28-201ENST00000237380 RBM5P52756 815 aaKnown RBP eCLIP8.85□□□□□ -0.99
MED28-201ENST00000237380 NUCB2P80303 420 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 MPHOSPH8Q99549 860 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 DEF6Q9H4E7 631 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 LRRCC1Q9C099 1032 aa8.85□□□□□ -0.99
MED28-201ENST00000237380 HECW1Q76N89 1606 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 RUNDC1Q96C34 613 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 ZPR1O75312 459 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
MED28-201ENST00000237380 PDCL3Q9H2J4 239 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 HMGB1P1B2RPK0 211 aaPredicted RBP8.84□□□□□ -0.99
MED28-201ENST00000237380 SMC3Q9UQE7 1217 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 NOL7Q9UMY1 257 aaKnown RBP8.84□□□□□ -0.99
MED28-201ENST00000237380 EPRSP07814 1512 aaKnown RBP8.84□□□□□ -0.99
MED28-201ENST00000237380 HSP90B2PQ58FF3 399 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 WASF1Q92558 559 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 B4DLN1 442 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 MRPL12P52815 198 aaKnown RBP8.84□□□□□ -0.99
MED28-201ENST00000237380 TTC39AQ5SRH9 613 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 IQCEQ6IPM2 695 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 TOM1L2Q6ZVM7 507 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 FERMT1Q9BQL6 677 aa8.84□□□□□ -0.99
MED28-201ENST00000237380 HSP90AB3PQ58FF7 597 aa8.84□□□□□ -1
MED28-201ENST00000237380 TXNDC2Q86VQ3 553 aa8.84□□□□□ -1
MED28-201ENST00000237380 IFT140Q96RY7 1462 aa8.83□□□□□ -1
MED28-201ENST00000237380 SLKQ9H2G2 1235 aaPredicted RBP8.83□□□□□ -1
MED28-201ENST00000237380 MINK1Q8N4C8 1332 aaPredicted RBP8.83□□□□□ -1
MED28-201ENST00000237380 BICD2Q8TD16 824 aa8.83□□□□□ -1
MED28-201ENST00000237380 CCDC97Q96F63 343 aaPredicted RBP8.83□□□□□ -1
MED28-201ENST00000237380 NEUROD6Q96NK8 337 aa8.83□□□□□ -1
MED28-201ENST00000237380 SUPT6HQ7KZ85 1726 aaKnown RBP8.83□□□□□ -1
MED28-201ENST00000237380 IGHMBP2P38935 993 aaKnown RBP8.83□□□□□ -1
MED28-201ENST00000237380 EFCAB5A4FU69 1503 aa8.83□□□□□ -1
MED28-201ENST00000237380 MYO1BO43795 1136 aa8.83□□□□□ -1
MED28-201ENST00000237380 NLRP6P59044 892 aa8.83□□□□□ -1
MED28-201ENST00000237380 SAMD1Q6SPF0 538 aaPredicted RBP8.83□□□□□ -1
MED28-201ENST00000237380 GIGYF2Q6Y7W6 1299 aaKnown RBP8.83□□□□□ -1
MED28-201ENST00000237380 SIN3AQ96ST3 1273 aa8.83□□□□□ -1
MED28-201ENST00000237380 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
MED28-201ENST00000237380 NCOA2Q15596 1464 aa8.83□□□□□ -1
MED28-201ENST00000237380 MRC2Q9UBG0 1479 aa8.83□□□□□ -1
MED28-201ENST00000237380 HOMER1Q86YM7 354 aa8.82□□□□□ -1
MED28-201ENST00000237380 ANKRD30BQ9BXX2 1392 aa8.82□□□□□ -1
MED28-201ENST00000237380 ZBED9Q6R2W3 1325 aa8.82□□□□□ -1
MED28-201ENST00000237380 RPGRIP1LQ68CZ1 1315 aa8.82□□□□□ -1
MED28-201ENST00000237380 CTNNA3Q9UI47 895 aa8.82□□□□□ -1
MED28-201ENST00000237380 CCAR2Q8N163 923 aaKnown RBP8.82□□□□□ -1
MED28-201ENST00000237380 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
MED28-201ENST00000237380 FERMT2Q96AC1 680 aa8.81□□□□□ -1
MED28-201ENST00000237380 GOLGA6L7A0A1B0GV03 622 aa8.81□□□□□ -1
MED28-201ENST00000237380 RIPK4P57078 832 aa8.81□□□□□ -1
MED28-201ENST00000237380 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
MED28-201ENST00000237380 RAB34Q9BZG1 259 aa8.81□□□□□ -1
MED28-201ENST00000237380 GOLGA6L10A6NI86 522 aa8.81□□□□□ -1
MED28-201ENST00000237380 ZSCAN29Q8IWY8 852 aaPredicted RBP8.81□□□□□ -1
MED28-201ENST00000237380 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
MED28-201ENST00000237380 ATAD2BQ9ULI0 1458 aa8.81□□□□□ -1
MED28-201ENST00000237380 A0A087WZG4 1122 aa8.81□□□□□ -1
MED28-201ENST00000237380 SRCIN1Q9C0H9 1055 aa8.81□□□□□ -1
MED28-201ENST00000237380 PABPN1LA6NDY0 278 aaKnown RBP8.8□□□□□ -1
MED28-201ENST00000237380 ZNF76P36508 570 aa8.8□□□□□ -1
MED28-201ENST00000237380 MATR3P43243 847 aaKnown RBP eCLIP8.8□□□□□ -1
MED28-201ENST00000237380 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
MED28-201ENST00000237380 PPP6R1Q9UPN7 881 aa8.8□□□□□ -1
MED28-201ENST00000237380 AKAP2Q9Y2D5 859 aa8.8□□□□□ -1
MED28-201ENST00000237380 CCDC69A6NI79 296 aa8.8□□□□□ -1
MED28-201ENST00000237380 FYB1O15117 783 aa8.8□□□□□ -1
MED28-201ENST00000237380 KIF20AO95235 890 aa8.8□□□□□ -1
MED28-201ENST00000237380 PPM1FP49593 454 aaPredicted RBP8.8□□□□□ -1
MED28-201ENST00000237380 CT47B1P0C2W7 299 aaPredicted RBP8.8□□□□□ -1
MED28-201ENST00000237380 CAVIN4Q5BKX8 364 aa8.8□□□□□ -1
MED28-201ENST00000237380 SPRYD3Q8NCJ5 442 aa8.8□□□□□ -1
MED28-201ENST00000237380 HFM1A2PYH4 1435 aa8.8□□□□□ -1
MED28-201ENST00000237380 FGFR1OPO95684 399 aaKnown RBP8.79□□□□□ -1
MED28-201ENST00000237380 TEX13AQ9BXU3 409 aaPredicted RBP8.79□□□□□ -1
MED28-201ENST00000237380 NEFHP12036 1026 aa8.79□□□□□ -1
MED28-201ENST00000237380 CUL5Q93034 780 aa8.79□□□□□ -1
MED28-201ENST00000237380 SEC63Q9UGP8 760 aaKnown RBP8.79□□□□□ -1
MED28-201ENST00000237380 STAMBPO95630 424 aa8.79□□□□□ -1
MED28-201ENST00000237380 CCT4P50991 539 aaKnown RBP8.79□□□□□ -1
MED28-201ENST00000237380 STRN4Q9NRL3 753 aa8.79□□□□□ -1
MED28-201ENST00000237380 TTC21AQ8NDW8 1320 aa8.79□□□□□ -1
MED28-201ENST00000237380 NF2P35240 595 aa8.79□□□□□ -1
MED28-201ENST00000237380 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
MED28-201ENST00000237380 CNTLNQ9NXG0 1405 aa8.79□□□□□ -1
MED28-201ENST00000237380 NUTM2DQ5VT03 806 aaPredicted RBP8.79□□□□□ -1
MED28-201ENST00000237380 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
MED28-201ENST00000237380 IL27Q8NEV9 243 aa8.79□□□□□ -1
MED28-201ENST00000237380 JAKMIP3Q5VZ66 844 aa8.78□□□□□ -1
MED28-201ENST00000237380 CCDC91Q7Z6B0 441 aa8.78□□□□□ -1
MED28-201ENST00000237380 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms