RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
TTC1-201ENST00000231238 CLTCL1P53675 1640 aa13.63□□□□□ -0.23
TTC1-201ENST00000231238 CARD11Q9BXL7 1154 aa13.63□□□□□ -0.23
TTC1-201ENST00000231238 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
TTC1-201ENST00000231238 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
TTC1-201ENST00000231238 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
TTC1-201ENST00000231238 POTEEQ6S8J3 1075 aa13.61□□□□□ -0.23
TTC1-201ENST00000231238 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
TTC1-201ENST00000231238 ARHGAP31Q2M1Z3 1444 aa13.6□□□□□ -0.23
TTC1-201ENST00000231238 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
TTC1-201ENST00000231238 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
TTC1-201ENST00000231238 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
TTC1-201ENST00000231238 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
TTC1-201ENST00000231238 PRAG1Q86YV5 1406 aa13.59□□□□□ -0.23
TTC1-201ENST00000231238 KIF1BO60333 1816 aa13.58□□□□□ -0.24
TTC1-201ENST00000231238 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
TTC1-201ENST00000231238 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
TTC1-201ENST00000231238 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
TTC1-201ENST00000231238 USP47Q96K76 1375 aa13.58□□□□□ -0.24
TTC1-201ENST00000231238 FOSBP53539 338 aa13.57□□□□□ -0.24
TTC1-201ENST00000231238 DDX10Q13206 875 aaKnown RBP13.57□□□□□ -0.24
TTC1-201ENST00000231238 PDIA6Q15084 440 aa13.56□□□□□ -0.24
TTC1-201ENST00000231238 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
TTC1-201ENST00000231238 NOS1P29475 1434 aa13.56□□□□□ -0.24
TTC1-201ENST00000231238 FBXO31Q5XUX0 539 aaPredicted RBP13.55□□□□□ -0.24
TTC1-201ENST00000231238 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
TTC1-201ENST00000231238 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
TTC1-201ENST00000231238 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
TTC1-201ENST00000231238 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
TTC1-201ENST00000231238 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
TTC1-201ENST00000231238 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
TTC1-201ENST00000231238 IDI1Q13907 227 aa13.53□□□□□ -0.24
TTC1-201ENST00000231238 ERVK-7P63135 1459 aa13.52□□□□□ -0.24
TTC1-201ENST00000231238 ADGRB3O60242 1522 aa13.52□□□□□ -0.24
TTC1-201ENST00000231238 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.24
TTC1-201ENST00000231238 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.25
TTC1-201ENST00000231238 PCDHGA10Q9Y5H3 936 aa13.52□□□□□ -0.25
TTC1-201ENST00000231238 ZMYM3Q14202 1370 aa13.51□□□□□ -0.25
TTC1-201ENST00000231238 SIGLEC1Q9BZZ2 1709 aa13.51□□□□□ -0.25
TTC1-201ENST00000231238 SYNMO15061 1565 aa13.51□□□□□ -0.25
TTC1-201ENST00000231238 TRPM1Q7Z4N2 1603 aa13.51□□□□□ -0.25
TTC1-201ENST00000231238 SPDYE16A6NNV3 312 aaPredicted RBP13.5□□□□□ -0.25
TTC1-201ENST00000231238 PTGER2P43116 358 aa13.5□□□□□ -0.25
TTC1-201ENST00000231238 MYOM2P54296 1465 aa13.49□□□□□ -0.25
TTC1-201ENST00000231238 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
TTC1-201ENST00000231238 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
TTC1-201ENST00000231238 ARHGEF1Q92888 912 aaKnown RBP13.49□□□□□ -0.25
TTC1-201ENST00000231238 MROH2AA6NES4 1674 aa13.49□□□□□ -0.25
TTC1-201ENST00000231238 DDX12PQ92771 950 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 ADGRF5Q8IZF2 1346 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 PBX2P40425 430 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 NUTM2DQ5VT03 806 aaPredicted RBP13.48□□□□□ -0.25
TTC1-201ENST00000231238 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
TTC1-201ENST00000231238 ANP32CO43423 234 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 PHF14O94880 888 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 PSEN2P49810 448 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 ZDHHC16Q969W1 377 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 ADAM33Q9BZ11 813 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 EIF3AQ14152 1382 aaKnown RBP13.47□□□□□ -0.25
TTC1-201ENST00000231238 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 TNRQ92752 1358 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 CCDC7Q96M83 1385 aa13.47□□□□□ -0.25
TTC1-201ENST00000231238 ARHGAP33O14559 1287 aa13.46□□□□□ -0.25
TTC1-201ENST00000231238 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
TTC1-201ENST00000231238 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
TTC1-201ENST00000231238 LAMC1P11047 1609 aa13.44□□□□□ -0.26
TTC1-201ENST00000231238 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
TTC1-201ENST00000231238 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
TTC1-201ENST00000231238 HDGFP51858 240 aaKnown RBP13.43□□□□□ -0.26
TTC1-201ENST00000231238 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
TTC1-201ENST00000231238 SPNS2Q8IVW8 549 aa13.43□□□□□ -0.26
TTC1-201ENST00000231238 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
TTC1-201ENST00000231238 C11orf95C9JLR9 678 aaPredicted RBP13.42□□□□□ -0.26
TTC1-201ENST00000231238 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
TTC1-201ENST00000231238 TMF1P82094 1093 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 BCANQ96GW7 911 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 PPLO60437 1756 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 TYW1BQ6NUM6 668 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.42□□□□□ -0.26
TTC1-201ENST00000231238 KCNK17Q96T54 332 aa13.42□□□□□ -0.26
TTC1-201ENST00000231238 FER1L4A9Z1Z3 1794 aa13.41□□□□□ -0.26
TTC1-201ENST00000231238 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
TTC1-201ENST00000231238 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
TTC1-201ENST00000231238 NEXMIFQ5QGS0 1516 aa13.41□□□□□ -0.26
TTC1-201ENST00000231238 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
TTC1-201ENST00000231238 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
TTC1-201ENST00000231238 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
TTC1-201ENST00000231238 EPAS1Q99814 870 aa13.4□□□□□ -0.26
TTC1-201ENST00000231238 C14orf93Q9H972 538 aaKnown RBP13.4□□□□□ -0.26
TTC1-201ENST00000231238 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
TTC1-201ENST00000231238 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
TTC1-201ENST00000231238 CDCA8Q53HL2 280 aa13.39□□□□□ -0.27
TTC1-201ENST00000231238 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
TTC1-201ENST00000231238 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
TTC1-201ENST00000231238 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
TTC1-201ENST00000231238 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms