RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 PTPN14Q15678 1187 aa16.26■□□□□ 0.19
SIPA1L3-201ENST00000222345 PANK3Q9H999 370 aa16.26■□□□□ 0.19
SIPA1L3-201ENST00000222345 IVLP07476 585 aa16.26■□□□□ 0.19
SIPA1L3-201ENST00000222345 FOXD1Q16676 465 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 KRT85P78386 507 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 STIM1Q13586 685 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 MEX3CQ5U5Q3 659 aaKnown RBP16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 NACADO15069 1562 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 SMTNL1A8MU46 457 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 LNPKQ9C0E8 428 aa16.25■□□□□ 0.19
SIPA1L3-201ENST00000222345 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
SIPA1L3-201ENST00000222345 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
SIPA1L3-201ENST00000222345 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
SIPA1L3-201ENST00000222345 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
SIPA1L3-201ENST00000222345 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
SIPA1L3-201ENST00000222345 NEMFO60524 1076 aa16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 CCDC144AA2RUR9 1427 aa16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 MAP2K1Q02750 393 aaPredicted RBP16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 SYCP1Q15431 976 aa16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 CFAP45Q9UL16 551 aa16.23■□□□□ 0.19
SIPA1L3-201ENST00000222345 MSH5O43196 834 aa16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 ZFYVE27Q5T4F4 411 aa16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
SIPA1L3-201ENST00000222345 KIAA1328Q86T90 577 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 FIBPO43427 364 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 PPP4R3BQ5MIZ7 849 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 SOGA1O94964 1423 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 NF2P35240 595 aa16.21■□□□□ 0.19
SIPA1L3-201ENST00000222345 FAM193AP78312 1265 aa16.21■□□□□ 0.18
SIPA1L3-201ENST00000222345 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.18
SIPA1L3-201ENST00000222345 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 NEK4P51957 841 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 CCDC27Q2M243 656 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 PAXBP1Q9Y5B6 917 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 TAX1BP1Q86VP1 789 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 CASQ1P31415 396 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 TICAM2Q86XR7 235 aa16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 DDX58O95786 925 aaKnown RBP16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 SSR1P43307 286 aaKnown RBP16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 NGDNQ8NEJ9 315 aaKnown RBP16.2■□□□□ 0.18
SIPA1L3-201ENST00000222345 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 MNAT1P51948 309 aa16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 JAKMIP3Q5VZ66 844 aa16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
SIPA1L3-201ENST00000222345 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 KIF3BO15066 747 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 NUP62CLQ9H1M0 184 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 APAF1O14727 1248 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 CCDC7Q96M83 1385 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 FMNL2Q96PY5 1086 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 KRT222Q8N1A0 295 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
SIPA1L3-201ENST00000222345 CUX2O14529 1486 aa16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 STK38Q15208 465 aa16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 IPO4Q8TEX9 1081 aaKnown RBP16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 AMPHP49418 695 aa16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 MAP3K11Q16584 847 aa16.17■□□□□ 0.18
SIPA1L3-201ENST00000222345 ANKRD62A6NC57 917 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 KIF5CO60282 957 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■■■□□ 14.9
SIPA1L3-201ENST00000222345 GNAI1P63096 354 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 PPM1EQ8WY54 764 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 TRIM34Q9BYJ4 488 aa16.16■□□□□ 0.18
SIPA1L3-201ENST00000222345 CCDC183Q5T5S1 534 aa16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 MYZAPP0CAP1 466 aa16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 EVA1CP58658 441 aa16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 CUX1P39880 1505 aa16.15■□□□□ 0.18
SIPA1L3-201ENST00000222345 CLCN1P35523 988 aa16.14■□□□□ 0.17
SIPA1L3-201ENST00000222345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms