RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 CHD1O14646 1710 aa7.33□□□□□ -1.24
CEACAM1-201ENST00000161559 ATF7IPQ6VMQ6 1270 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 WDR63Q8IWG1 891 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 NINLQ9Y2I6 1382 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 ZBTB40Q9NUA8 1239 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 STK26Q9P289 416 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 ABCC1P33527 1531 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 ANKRD45Q5TZF3 282 aa7.32□□□□□ -1.24
CEACAM1-201ENST00000161559 NCOA3Q9Y6Q9 1424 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 TMPOP42166 694 aaKnown RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 FOXD4L5Q5VV16 416 aaPredicted RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 SMC5Q8IY18 1101 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 TSPYL6Q8N831 410 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 FOXD4L4Q8WXT5 416 aaPredicted RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 PLEKHF1Q96S99 279 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 ZFYVE16Q7Z3T8 1539 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 PLCH2O75038 1416 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 SIRT2Q8IXJ6 389 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 C16orf71Q8IYS4 520 aaPredicted RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 MPNDQ8N594 471 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 JARID2Q92833 1246 aaPredicted RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 STAG3Q9UJ98 1225 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 QRICH2Q9H0J4 1663 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 APBB1O00213 710 aa7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
CEACAM1-201ENST00000161559 RIPK4P57078 832 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 NUCB1Q02818 461 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 HDAC1Q13547 482 aaPredicted RBP7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 RAB3GAP1Q15042 981 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 CHD1LQ86WJ1 897 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 OTUD7AQ8TE49 926 aaPredicted RBP7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 GGT6Q6P531 493 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 KIAA1211Q6ZU35 1233 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 TRIM44Q96DX7 344 aaPredicted RBP7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 PPIP5K1Q6PFW1 1433 aa7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
CEACAM1-201ENST00000161559 DDX11L8A8MPP1 907 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 DTNBO60941 627 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 HMOX1P09601 288 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 NSFL1CQ9UNZ2 370 aaKnown RBP7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 TPRNQ4KMQ1 711 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 DDX19BQ9UMR2 479 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 TET3O43151 1660 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 SHROOM2Q13796 1616 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 ZCCHC11Q5TAX3 1644 aaKnown RBP7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 MROH1Q8NDA8 1641 aa7.29□□□□□ -1.24
CEACAM1-201ENST00000161559 ASXL2Q76L83 1435 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 GSPT1P15170 499 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 MCTP1Q6DN14 999 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 ZGPATQ8N5A5 531 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 PHACTR3Q96KR7 559 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 NASPP49321 788 aaPredicted RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 XPCQ01831 940 aaPredicted RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 CCDC27Q2M243 656 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 CAVIN1Q6NZI2 390 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 KIF1BO60333 1816 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 IFT172Q9UG01 1749 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 A0A1W2PP64 1363 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 RAPGEF3O95398 923 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 FOXD4L6Q3SYB3 417 aaPredicted RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 FOXD4L3Q6VB84 417 aaPredicted RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 DDX49Q9Y6V7 483 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 ZC3H13Q5T200 1668 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 PPRC1Q5VV67 1664 aaKnown RBP7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 TULP4Q9NRJ4 1543 aa7.28□□□□□ -1.24
CEACAM1-201ENST00000161559 ADGRB2O60241 1585 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 DEPDC5O75140 1603 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 FAM83GA6ND36 823 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 K7ELQ4 463 aaPredicted RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 SMARCA5O60264 1052 aaPredicted RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 BAG4O95429 457 aaKnown RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 DCTN1Q14203 1278 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 KRT24Q2M2I5 525 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 RBSNQ9H1K0 784 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 KIAA1210Q9ULL0 1709 aa7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 RRP9O43818 475 aaKnown RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 SRPK2P78362 688 aaKnown RBP7.27□□□□□ -1.25
CEACAM1-201ENST00000161559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.27□□□□□ -1.253e-8■■□□□ 12.2
CEACAM1-201ENST00000161559 ADGRB1O14514 1584 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 ZBTB7BO15156 539 aaPredicted RBP7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 TSHZ3Q63HK5 1081 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 FYB1O15117 783 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 PRIM1P49642 420 aaKnown RBP7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 SNX21Q969T3 373 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 FAM13BQ9NYF5 915 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 R3HCC1Q9Y3T6 440 aaKnown RBP7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 KANK1Q14678 1352 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 ATP7AQ04656 1500 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 MYOM2P54296 1465 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 MYO3AQ8NEV4 1616 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 NOL8Q76FK4 1167 aaKnown RBP7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 NGEFQ8N5V2 710 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 RNF214Q8ND24 703 aa7.26□□□□□ -1.25
CEACAM1-201ENST00000161559 TSC1Q92574 1164 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms