RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
HDAC7-201ENST00000080059 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
HDAC7-201ENST00000080059 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
HDAC7-201ENST00000080059 MIS18AQ9NYP9 233 aa16.18■□□□□ 0.18
HDAC7-201ENST00000080059 CFAP65Q6ZU64 1925 aaKnown RBP16.17■□□□□ 0.18
HDAC7-201ENST00000080059 NKTRP30414 1462 aaKnown RBP16.17■□□□□ 0.18
HDAC7-201ENST00000080059 MCM10Q7L590 875 aa16.17■□□□□ 0.18
HDAC7-201ENST00000080059 CCDC30Q5VVM6 783 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 GCC2Q8IWJ2 1684 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 REC8O95072 547 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
HDAC7-201ENST00000080059 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 POGZQ7Z3K3 1410 aa16.15■□□□□ 0.18
HDAC7-201ENST00000080059 FOXD4L6Q3SYB3 417 aaPredicted RBP16.14■□□□□ 0.18
HDAC7-201ENST00000080059 FOXD4L3Q6VB84 417 aaPredicted RBP16.14■□□□□ 0.18
HDAC7-201ENST00000080059 ASXL1Q8IXJ9 1541 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 MSH5O43196 834 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 GSE1Q14687 1217 aa16.14■□□□□ 0.17
HDAC7-201ENST00000080059 DNTTIP2Q5QJE6 756 aaKnown RBP16.13■□□□□ 0.17
HDAC7-201ENST00000080059 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
HDAC7-201ENST00000080059 ZNF428Q96B54 188 aa16.13■□□□□ 0.17
HDAC7-201ENST00000080059 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
HDAC7-201ENST00000080059 ABCA8O94911 1581 aa16.13■□□□□ 0.17
HDAC7-201ENST00000080059 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
HDAC7-201ENST00000080059 GOLGA6L3A6NEY3 463 aa16.12■□□□□ 0.17
HDAC7-201ENST00000080059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.174e-6■■■□□ 19
HDAC7-201ENST00000080059 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
HDAC7-201ENST00000080059 GNAI3P08754 354 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 DIAPH3Q9NSV4 1193 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-201ENST00000080059 INTS3Q68E01 1043 aaKnown RBP16.11■□□□□ 0.17
HDAC7-201ENST00000080059 ZNF530Q6P9A1 599 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-201ENST00000080059 COL17A1Q9UMD9 1497 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-201ENST00000080059 ANKRD36BQ8N2N9 1353 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 TRIM27P14373 513 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 GCC1Q96CN9 775 aa16.11■□□□□ 0.17
HDAC7-201ENST00000080059 IFIT2P09913 472 aaKnown RBP16.1■□□□□ 0.17
HDAC7-201ENST00000080059 CHMP5Q9NZZ3 219 aa16.1■□□□□ 0.17
HDAC7-201ENST00000080059 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-201ENST00000080059 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
HDAC7-201ENST00000080059 FOXO3O43524 673 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 CDC45O75419 566 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
HDAC7-201ENST00000080059 ZRANB1Q9UGI0 708 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-201ENST00000080059 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-201ENST00000080059 NSD2O96028 1365 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
HDAC7-201ENST00000080059 ACEP12821 1306 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC7-201ENST00000080059 ATP7AQ04656 1500 aa16.09■□□□□ 0.17
HDAC7-201ENST00000080059 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.16
HDAC7-201ENST00000080059 IGHDP01880 384 aa16.08■□□□□ 0.16
HDAC7-201ENST00000080059 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
HDAC7-201ENST00000080059 GNAI2P04899 355 aa16.07■□□□□ 0.16
HDAC7-201ENST00000080059 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
HDAC7-201ENST00000080059 ABCC11Q96J66 1382 aa16.07■□□□□ 0.16
HDAC7-201ENST00000080059 PTMSP20962 102 aa16.07■□□□□ 0.16
HDAC7-201ENST00000080059 EIF2AK4Q9P2K8 1649 aaKnown RBP16.07■□□□□ 0.16
HDAC7-201ENST00000080059 DDX11L8A8MPP1 907 aa16.06■□□□□ 0.16
HDAC7-201ENST00000080059 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
HDAC7-201ENST00000080059 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
HDAC7-201ENST00000080059 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
HDAC7-201ENST00000080059 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
HDAC7-201ENST00000080059 TNRQ92752 1358 aa16.05■□□□□ 0.16
HDAC7-201ENST00000080059 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
HDAC7-201ENST00000080059 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
HDAC7-201ENST00000080059 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
HDAC7-201ENST00000080059 PHF8Q9UPP1 1060 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 UHRF1BP1LA0JNW5 1464 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 GTF2E1P29083 439 aaPredicted RBP16.04■□□□□ 0.16
HDAC7-201ENST00000080059 HSP90AB4PQ58FF6 505 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 SAMD9LQ8IVG5 1584 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 GNAT3A8MTJ3 354 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
HDAC7-201ENST00000080059 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
HDAC7-201ENST00000080059 CLASRPQ8N2M8 674 aaKnown RBP16.03■□□□□ 0.16
HDAC7-201ENST00000080059 F6X3S4 739 aa16.03■□□□□ 0.16
HDAC7-201ENST00000080059 RIMS2Q9UQ26 1411 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 A0A1W2PP64 1363 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 PCDHB15Q9Y5E8 787 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 MSNP26038 577 aaKnown RBP16.02■□□□□ 0.16
HDAC7-201ENST00000080059 SRCIN1Q9C0H9 1055 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 STRN4Q9NRL3 753 aa16.02■□□□□ 0.16
HDAC7-201ENST00000080059 MBIPQ9NS73 344 aa16.02■□□□□ 0.15
HDAC7-201ENST00000080059 PIK3C2GO75747 1445 aa16.02■□□□□ 0.15
HDAC7-201ENST00000080059 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-201ENST00000080059 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-201ENST00000080059 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
HDAC7-201ENST00000080059 GNL2Q13823 731 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms