RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Cyb5rlB1AS42 316 aa16.04■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Ccdc43Q9CR29 222 aaKnown RBP16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Eva1cP58659 440 aa16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Atf3Q60765 181 aa16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Kdm3bQ6ZPY7 1562 aa16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Sirt1Q923E4 737 aa16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Synj2Q9D2G5 1434 aa16.03■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Fmn2Q9JL04 1578 aa16.02■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Hmox1P14901 289 aa16.02■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Prkrip1Q9CWV6 186 aaKnown RBP16.02■□□□□ 0.16
Rnf40-202ENSMUST00000205694 Ssh2Q5SW75 1423 aa16.02■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Drc7Q6V3W6 876 aa16.02■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Gpatch3Q8BIY1 525 aa16.02■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Hmgn5Q9JL35 406 aa16.02■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Mcm2P97310 904 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Gtf3c3Q3TMP1 882 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Pank1Q8K4K6 548 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Gli2Q0VGT2 1544 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Nectin2P32507 530 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Trim29Q8R2Q0 587 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 PtprtQ99M80 1454 aa16.01■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ccdc171E9Q1U1 1324 aa16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ccdc34Q3UI66 367 aa16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 KarsQ99MN1 595 aaKnown RBP16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 NpatQ8BMA5 1420 aa16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Gm10471E9Q1C7 252 aa16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Bcl11bQ99PV8 884 aa16■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Plekhh1Q80TI1 1356 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Cfap99A0A140LIX9 648 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Cyp46a1Q9WVK8 500 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Zpr1Q62384 459 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Me1P06801 572 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 HypkQ9CR41 129 aa15.99■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Asxl1P59598 1514 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Kiaa1551Q5DTW7 1521 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Nek4Q9Z1J2 792 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Psma5Q9Z2U1 241 aaKnown RBP15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 BcanQ61361 883 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Adgrb2Q8CGM1 1561 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Taf3Q5HZG4 932 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 March6Q6ZQ89 909 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Necab1Q8BG18 352 aa15.98■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ccdc183A2AJB1 534 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Lrrcc1Q69ZB0 1026 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Atp7aQ64430 1491 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Mphosph10Q810V0 681 aaKnown RBP15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Pik3c2gO70167 1506 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Talpid3E9PV87 1520 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Cavin4A2AMM0 362 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Arid4aF8VPQ2 1261 aaKnown RBP15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Chrna2Q91X60 512 aa15.97■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Mad1l1Q9WTX8 717 aaKnown RBP15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ccdc173A0JLY1 547 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Bcl2l13P59017 434 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ints3Q7TPD0 1041 aaKnown RBP15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 NaspQ99MD9 773 aaKnown RBP15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Zkscan2G3X952 960 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Ubxn4Q8VCH8 506 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Rprd2Q6NXI6 1469 aaKnown RBP15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 SkilQ60665 675 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 SphkapQ6NSW3 1687 aa15.96■□□□□ 0.15
Rnf40-202ENSMUST00000205694 Wdr78E9PYY5 807 aa15.96■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Hap1O35668 628 aa15.96■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Nutm1Q8BHP2 1126 aa15.96■□□□□ 0.14
Rnf40-202ENSMUST00000205694 PogkQ80TC5 607 aa15.95■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Hnrnpul1Q8VDM6 859 aaKnown RBP15.95■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Lrrc9Q8CDN9 1456 aa15.95■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Znf608Q56A10 1511 aa15.95■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Fam208aQ69ZR9 1610 aaKnown RBP15.94■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Zranb3Q6NZP1 1069 aa15.94■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Rbm28Q8CGC6 750 aaKnown RBP15.94■□□□□ 0.14
Rnf40-202ENSMUST00000205694 FosbP13346 338 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Polr3aB2RXC6 1390 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Znhit6Q3UFB2 460 aaKnown RBP15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 PsapQ61207 557 aaKnown RBP15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Chmp4cQ9D7F7 232 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Washc2Q6PGL7 1334 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Znf518aB2RRF6 1478 aaKnown RBP15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 OptnQ8K3K8 584 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 TefQ9JLC6 301 aa15.93■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Gcom1E9PZ54 550 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 MyzapQ3UIJ9 466 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Ppp2r1aQ76MZ3 589 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Sall3Q62255 1320 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Ptch1Q61115 1434 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Zrsr2Q62377 462 aaKnown RBP15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Evi5lH3BKQ3 813 aa15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Smg7Q5RJH6 1138 aaKnown RBP15.92■□□□□ 0.14
Rnf40-202ENSMUST00000205694 EzrP26040 586 aaKnown RBP15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 1700010I14RikQ7TPG0 532 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Depdc5P61460 1591 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Usp48Q3V0C5 1052 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Dixdc1Q80Y83 711 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Fam193aQ8CGI1 1231 aaKnown RBP15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Mroh2aD3Z750 1679 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Rab3gap2Q8BMG7 1366 aa15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Smc2Q8CG48 1191 aaKnown RBP15.91■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Odf2lQ9D478 642 aa15.9■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Ttll13A4Q9F6 804 aa15.89■□□□□ 0.14
Rnf40-202ENSMUST00000205694 Ppp2r3aB2RXC8 1150 aa15.89■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms