RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Map3k19E9Q3S4 1311 aa23.29■■□□□ 1.32
Trim54-202ENSMUST00000202769 Cdhr2E9Q7P9 1308 aa23.29■■□□□ 1.32
Trim54-202ENSMUST00000202769 Bcl9lQ67FY2 1494 aa23.29■■□□□ 1.32
Trim54-202ENSMUST00000202769 CatipB9EKE5 520 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 Exosc9Q9JHI7 438 aaKnown RBP23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 TimelessQ9R1X4 1197 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 InsrP15208 1372 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 Zmym3Q9JLM4 1370 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 Nfat5Q9WV30 1534 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 Tet3Q8BG87 1668 aa23.28■■□□□ 1.32
Trim54-202ENSMUST00000202769 InhbeO08717 350 aa23.27■■□□□ 1.32
Trim54-202ENSMUST00000202769 PaskQ8CEE6 1383 aa23.27■■□□□ 1.32
Trim54-202ENSMUST00000202769 Dzip1Q8BMD2 852 aa23.24■■□□□ 1.31
Trim54-202ENSMUST00000202769 Txnrd1Q9JMH6 613 aa23.24■■□□□ 1.31
Trim54-202ENSMUST00000202769 Frmpd2A0A140LI67 1392 aa23.23■■□□□ 1.31
Trim54-202ENSMUST00000202769 Psrc1Q9D0P7 329 aa23.23■■□□□ 1.31
Trim54-202ENSMUST00000202769 Shank2Q80Z38 1476 aa23.23■■□□□ 1.31
Trim54-202ENSMUST00000202769 MpndQ3TV65 487 aa23.22■■□□□ 1.31
Trim54-202ENSMUST00000202769 Tnrc6cQ3UHC0 1690 aaKnown RBP23.22■■□□□ 1.31
Trim54-202ENSMUST00000202769 ZgpatQ8VDM1 511 aa23.21■■□□□ 1.31
Trim54-202ENSMUST00000202769 Nid2O88322 1403 aa23.19■■□□□ 1.3
Trim54-202ENSMUST00000202769 Znf335A2A5K6 1337 aa23.19■■□□□ 1.3
Trim54-202ENSMUST00000202769 Ppargc1bQ8VHJ7 1014 aa23.18■■□□□ 1.3
Trim54-202ENSMUST00000202769 Col22a1E9Q7P1 1613 aa23.18■■□□□ 1.3
Trim54-202ENSMUST00000202769 Rgs17Q9QZB0 210 aa23.17■■□□□ 1.3
Trim54-202ENSMUST00000202769 Cnga1P29974 684 aa23.16■■□□□ 1.3
Trim54-202ENSMUST00000202769 Rtl5Q5DTT4 599 aa23.16■■□□□ 1.3
Trim54-202ENSMUST00000202769 Sgsm1Q8BPQ7 1093 aa23.16■■□□□ 1.3
Trim54-202ENSMUST00000202769 HdgfP51859 237 aaKnown RBP23.15■■□□□ 1.3
Trim54-202ENSMUST00000202769 Gimap6Q8K349 305 aa23.14■■□□□ 1.29
Trim54-202ENSMUST00000202769 Ltbp1Q8CG19 1712 aa23.13■■□□□ 1.29
Trim54-202ENSMUST00000202769 Ncapd2Q8K2Z4 1392 aa23.13■■□□□ 1.29
Trim54-202ENSMUST00000202769 TonslQ6NZL6 1363 aa23.12■■□□□ 1.29
Trim54-202ENSMUST00000202769 Sf3b2Q3UJB0 878 aaKnown RBP23.11■■□□□ 1.29
Trim54-202ENSMUST00000202769 Kif16bB1AVY7 1312 aa23.11■■□□□ 1.29
Trim54-202ENSMUST00000202769 Ncoa4Q5U4H9 625 aa23.1■■□□□ 1.29
Trim54-202ENSMUST00000202769 Gm21698A0A087WQP8 267 aa23.08■■□□□ 1.29
Trim54-202ENSMUST00000202769 Gm21671G3UY31 267 aa23.08■■□□□ 1.29
Trim54-202ENSMUST00000202769 Rpgrip1Q9EPQ2 1331 aa23.08■■□□□ 1.29
Trim54-202ENSMUST00000202769 Cacna1sQ02789 1880 aa23.08■■□□□ 1.28
Trim54-202ENSMUST00000202769 Pard3Q99NH2 1333 aa23.07■■□□□ 1.28
Trim54-202ENSMUST00000202769 Ccdc129Q14B48 1034 aa23.06■■□□□ 1.28
Trim54-202ENSMUST00000202769 Tnks1bp1P58871 1720 aa23.04■■□□□ 1.28
Trim54-202ENSMUST00000202769 Gm21190A0A0G2JGJ6 266 aa23.03■■□□□ 1.28
Trim54-202ENSMUST00000202769 Dennd6aQ8BH65 605 aa23.01■■□□□ 1.27
Trim54-202ENSMUST00000202769 Fer1l6E0CZ42 1862 aa23.01■■□□□ 1.27
Trim54-202ENSMUST00000202769 Slx1bQ8BX32 270 aa23■■□□□ 1.27
Trim54-202ENSMUST00000202769 Astn2Q80Z10 1352 aa23■■□□□ 1.27
Trim54-202ENSMUST00000202769 Nlgn1Q99K10 843 aa22.99■■□□□ 1.27
Trim54-202ENSMUST00000202769 Nckap5lQ6GQX2 1323 aa22.99■■□□□ 1.27
Trim54-202ENSMUST00000202769 Mdc1Q5PSV9 1707 aa22.99■■□□□ 1.27
Trim54-202ENSMUST00000202769 Card10P58660 1021 aa22.98■■□□□ 1.27
Trim54-202ENSMUST00000202769 TnrQ8BYI9 1358 aa22.97■■□□□ 1.27
Trim54-202ENSMUST00000202769 Chd4Q6PDQ2 1915 aaKnown RBP22.97■■□□□ 1.27
Trim54-202ENSMUST00000202769 Cdk12Q14AX6 1484 aaKnown RBP22.96■■□□□ 1.27
Trim54-202ENSMUST00000202769 Kcnh5Q920E3 988 aa22.96■■□□□ 1.27
Trim54-202ENSMUST00000202769 Ubr1O70481 1757 aa22.96■■□□□ 1.27
Trim54-202ENSMUST00000202769 Mast2Q60592 1734 aa22.95■■□□□ 1.26
Trim54-202ENSMUST00000202769 Nup153E9Q3G8 1462 aaKnown RBP22.95■■□□□ 1.26
Trim54-202ENSMUST00000202769 Dnajc10Q9DC23 793 aa22.94■■□□□ 1.26
Trim54-202ENSMUST00000202769 Ly75Q60767 1723 aa22.93■■□□□ 1.26
Trim54-202ENSMUST00000202769 Ccdc6D3YZP9 469 aa22.93■■□□□ 1.26
Trim54-202ENSMUST00000202769 Amotl2Q8K371 772 aa22.93■■□□□ 1.26
Trim54-202ENSMUST00000202769 Scn7aB1AYL1 1681 aa22.93■■□□□ 1.26
Trim54-202ENSMUST00000202769 Sugp2Q8CH09 1067 aa22.92■■□□□ 1.26
Trim54-202ENSMUST00000202769 Zeb2Q9R0G7 1215 aa22.92■■□□□ 1.26
Trim54-202ENSMUST00000202769 Robo1O89026 1612 aa22.92■■□□□ 1.26
Trim54-202ENSMUST00000202769 NefmP08553 848 aa22.91■■□□□ 1.26
Trim54-202ENSMUST00000202769 Pm20d1Q8C165 503 aa22.91■■□□□ 1.26
Trim54-202ENSMUST00000202769 CemipQ8BI06 1361 aa22.91■■□□□ 1.26
Trim54-202ENSMUST00000202769 Ildr2B5TVM2 661 aa22.91■■□□□ 1.26
Trim54-202ENSMUST00000202769 Cabp4Q8VHC5 271 aa22.91■■□□□ 1.26
Trim54-202ENSMUST00000202769 Kat6bQ8BRB7 1872 aa22.9■■□□□ 1.26
Trim54-202ENSMUST00000202769 Fmnl2A2APV2 1086 aa22.89■■□□□ 1.25
Trim54-202ENSMUST00000202769 Slc4a1apE9PX68 744 aa22.89■■□□□ 1.25
Trim54-202ENSMUST00000202769 TatQ8QZR1 454 aa22.89■■□□□ 1.25
Trim54-202ENSMUST00000202769 FancaQ9JL70 1439 aa22.88■■□□□ 1.25
Trim54-202ENSMUST00000202769 Cwc22Q8C5N3 908 aaKnown RBP22.88■■□□□ 1.25
Trim54-202ENSMUST00000202769 Kiaa0319Q5SZV5 1081 aa22.87■■□□□ 1.25
Trim54-202ENSMUST00000202769 Ano8Q6PB70 1060 aa22.87■■□□□ 1.25
Trim54-202ENSMUST00000202769 Map2P20357 1828 aa22.87■■□□□ 1.25
Trim54-202ENSMUST00000202769 Prdm10Q3UTQ7 1184 aa22.86■■□□□ 1.25
Trim54-202ENSMUST00000202769 Adamtsl1Q8BLI0 1745 aa22.85■■□□□ 1.25
Trim54-202ENSMUST00000202769 Taok3Q8BYC6 898 aa22.84■■□□□ 1.25
Trim54-202ENSMUST00000202769 Slc24a1Q91WD8 1130 aa22.84■■□□□ 1.25
Trim54-202ENSMUST00000202769 RgmbQ7TQ33 436 aa22.83■■□□□ 1.25
Trim54-202ENSMUST00000202769 Akap11E9Q777 1895 aa22.83■■□□□ 1.24
Trim54-202ENSMUST00000202769 Ubap1lG3UW59 384 aa22.82■■□□□ 1.24
Trim54-202ENSMUST00000202769 Sin3aQ60520 1274 aaKnown RBP22.82■■□□□ 1.24
Trim54-202ENSMUST00000202769 Nol11Q8BJW5 723 aaKnown RBP22.82■■□□□ 1.24
Trim54-202ENSMUST00000202769 Scaf1Q5U4C3 1256 aaKnown RBP22.8■■□□□ 1.24
Trim54-202ENSMUST00000202769 Nwd2Q6P5U7 1742 aa22.79■■□□□ 1.24
Trim54-202ENSMUST00000202769 Fam184bQ0KK56 942 aa22.78■■□□□ 1.24
Trim54-202ENSMUST00000202769 Kdm2bQ6P1G2 1309 aa22.77■■□□□ 1.24
Trim54-202ENSMUST00000202769 Tmem132eQ6IEE6 982 aa22.77■■□□□ 1.24
Trim54-202ENSMUST00000202769 FocadA2AKG8 1798 aa22.77■■□□□ 1.24
Trim54-202ENSMUST00000202769 Uhrf1bp1lA2RSJ4 1457 aa22.77■■□□□ 1.24
Trim54-202ENSMUST00000202769 Slit1Q80TR4 1531 aa22.76■■□□□ 1.23
Trim54-202ENSMUST00000202769 Ppp6r1Q7TSI3 856 aa22.76■■□□□ 1.23
Trim54-202ENSMUST00000202769 4930523C07RikE9Q2T4 99 aa22.75■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms