RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Hfm1D3Z4R1 1434 aa12.81□□□□□ -0.36
Usp4-209ENSMUST00000194959 Tnnt1O88346 262 aa12.81□□□□□ -0.36
Usp4-209ENSMUST00000194959 Itsn2Q9Z0R6 1659 aa12.81□□□□□ -0.36
Usp4-209ENSMUST00000194959 Atp10aO54827 1508 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 CastP51125 788 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cc2d1aQ8K1A6 943 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 Map3k19E9Q3S4 1311 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cdk5rap2Q8K389 1822 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 FanciQ8K368 1330 aa12.8□□□□□ -0.36
Usp4-209ENSMUST00000194959 Adgrl3Q80TS3 1537 aa12.79□□□□□ -0.36
Usp4-209ENSMUST00000194959 GorabQ8BRM2 368 aa12.79□□□□□ -0.36
Usp4-209ENSMUST00000194959 Knl1Q66JQ7 1612 aa12.79□□□□□ -0.36
Usp4-209ENSMUST00000194959 Nkx1-2P42580 305 aa12.79□□□□□ -0.36
Usp4-209ENSMUST00000194959 AU019823E9PUQ3 292 aa12.78□□□□□ -0.36
Usp4-209ENSMUST00000194959 Abca8aQ8K442 1620 aa12.78□□□□□ -0.36
Usp4-209ENSMUST00000194959 Fgd1P52734 960 aa12.78□□□□□ -0.36
Usp4-209ENSMUST00000194959 Ggnbp2Q5SV77 696 aa12.78□□□□□ -0.36
Usp4-209ENSMUST00000194959 Cdc37l1Q9CZP7 335 aa12.78□□□□□ -0.36
Usp4-209ENSMUST00000194959 Uggt1Q6P5E4 1551 aa12.77□□□□□ -0.36
Usp4-209ENSMUST00000194959 Myom2Q14BI5 1463 aa12.77□□□□□ -0.36
Usp4-209ENSMUST00000194959 TnikP83510 1323 aa12.77□□□□□ -0.37
Usp4-209ENSMUST00000194959 Amer1Q7TS75 1132 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Gm21190A0A0G2JGJ6 266 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 IghaA0A0A6YXW6 389 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ccdc146E9Q9F7 977 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Plekhm2Q80TQ5 1018 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Stk31Q99MW1 1018 aa12.76□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ppp2r3aB2RXC8 1150 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Vsig10D3YX43 558 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 RereQ80TZ9 1558 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Snap23O09044 210 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Q3UPC7 1272 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Tnpo1Q8BFY9 898 aaKnown RBP12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ehbp1l1Q99MS7 1716 aa12.75□□□□□ -0.37
Usp4-209ENSMUST00000194959 Cog6Q8R3I3 657 aa12.74□□□□□ -0.37
Usp4-209ENSMUST00000194959 Triml2E9PW10 424 aa12.74□□□□□ -0.37
Usp4-209ENSMUST00000194959 Stk11ipQ3TAA7 1072 aa12.74□□□□□ -0.37
Usp4-209ENSMUST00000194959 Topbp1Q6ZQF0 1515 aa12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Tmem131lQ3U3D7 1597 aa12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Clasp1Q80TV8 1535 aaKnown RBP12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ric3Q8BPM6 367 aa12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Rsph4aQ8BYM7 716 aa12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ttc41Q692V3 1318 aa12.73□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ercc6l2Q9JIM3 1537 aa12.72□□□□□ -0.37
Usp4-209ENSMUST00000194959 Q3UJC8 639 aa12.72□□□□□ -0.37
Usp4-209ENSMUST00000194959 Q4VA45 678 aa12.72□□□□□ -0.37
Usp4-209ENSMUST00000194959 Akap12Q9WTQ5 1684 aa12.71□□□□□ -0.37
Usp4-209ENSMUST00000194959 Naip7Q9JIB3 1402 aa12.71□□□□□ -0.37
Usp4-209ENSMUST00000194959 Ankrd50F7BE84 1390 aa12.71□□□□□ -0.37
Usp4-209ENSMUST00000194959 Kif18aQ91WD7 886 aa12.71□□□□□ -0.37
Usp4-209ENSMUST00000194959 Gnai1B2RSH2 354 aa12.71□□□□□ -0.38
Usp4-209ENSMUST00000194959 Aifm3Q3TY86 605 aa12.71□□□□□ -0.38
Usp4-209ENSMUST00000194959 Gnai3Q9DC51 354 aa12.71□□□□□ -0.38
Usp4-209ENSMUST00000194959 Mroh1E0CZ22 1640 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Rtf1A2AQ19 715 aaKnown RBP12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ppp1r15aP17564 657 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Rfx1P48377 963 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 NpatQ8BMA5 1420 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Cdc42bpgQ80UW5 1551 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Vamp4O70480 141 aa12.7□□□□□ -0.38
Usp4-209ENSMUST00000194959 Uhrf1bp1lA2RSJ4 1457 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Idi2Q8BFZ6 227 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Rsph6aQ8CDR2 708 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ahdc1Q6PAL7 1594 aaKnown RBP12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 PtprmP28828 1452 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Eif4a2P10630 407 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Prim1P20664 417 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 MlecQ6ZQI3 291 aaKnown RBP12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Nckap5lQ6GQX2 1323 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Synj2Q9D2G5 1434 aa12.69□□□□□ -0.38
Usp4-209ENSMUST00000194959 Map7O88735 730 aa12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 Q3TQI7 289 aaKnown RBP12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 Myom1Q62234 1667 aaKnown RBP12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 TmpoQ61033 693 aaKnown RBP12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ap3b2Q9JME5 1082 aa12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ccne1Q61457 408 aa12.68□□□□□ -0.38
Usp4-209ENSMUST00000194959 AdgbG3UZ78 1657 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 AglF8VPN4 1532 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 SkilQ60665 675 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 Chmp4cQ9D7F7 232 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 Fchsd2Q3USJ8 740 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 Mre11Q61216 706 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 Tmem132eQ6IEE6 982 aa12.67□□□□□ -0.38
Usp4-209ENSMUST00000194959 CatipB9EKE5 520 aa12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Gm10563F6WIE4 79 aa12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Trim28Q62318 834 aa12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Arhgap23Q69ZH9 1483 aa12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Smarca5Q91ZW3 1051 aaKnown RBP12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ttc21aQ8C0S4 1314 aa12.66□□□□□ -0.38
Usp4-209ENSMUST00000194959 Tecpr2Q3UH45 1423 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Idi1P58044 227 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Aldh1l1Q8R0Y6 902 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Nek4Q9Z1J2 792 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ccdc171E9Q1U1 1324 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 DekQ7TNV0 380 aaKnown RBP12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Ciz1Q8VEH2 845 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Atl3Q91YH5 541 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Znf521Q6KAS7 1311 aa12.65□□□□□ -0.38
Usp4-209ENSMUST00000194959 Dennd6aQ8BH65 605 aa12.65□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms