RNA–Protein interactions for RNA: ENSMUST00000170731.7

Rtn4-210, Transcript of Reticulon-4, mousemouse

TSL 1 (best) BASIC

Gene Rtn4, Length 1,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4-210ENSMUST00000170731 Pola1P33609 1465 aa28.17■■■□□ 2.1
Rtn4-210ENSMUST00000170731 Sbno1Q689Z5 1390 aa28.17■■■□□ 2.1
Rtn4-210ENSMUST00000170731 MpndQ3TV65 487 aa28.17■■■□□ 2.1
Rtn4-210ENSMUST00000170731 Idi2Q8BFZ6 227 aa28.16■■■□□ 2.1
Rtn4-210ENSMUST00000170731 Rgs17Q9QZB0 210 aa28.16■■■□□ 2.1
Rtn4-210ENSMUST00000170731 Shank2Q80Z38 1476 aa28.15■■■□□ 2.1
Rtn4-210ENSMUST00000170731 TimelessQ9R1X4 1197 aa28.14■■■□□ 2.1
Rtn4-210ENSMUST00000170731 PaskQ8CEE6 1383 aa28.12■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Zbtb4Q5F293 982 aa28.12■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Psrc1Q9D0P7 329 aa28.12■■■□□ 2.09
Rtn4-210ENSMUST00000170731 FanciQ8K368 1330 aa28.12■■■□□ 2.09
Rtn4-210ENSMUST00000170731 CatipB9EKE5 520 aa28.11■■■□□ 2.09
Rtn4-210ENSMUST00000170731 ZgpatQ8VDM1 511 aa28.11■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Map3k19E9Q3S4 1311 aa28.11■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Rundc1Q0VDN7 615 aa28.1■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Txnrd1Q9JMH6 613 aa28.08■■■□□ 2.09
Rtn4-210ENSMUST00000170731 InsrP15208 1372 aa28.08■■■□□ 2.09
Rtn4-210ENSMUST00000170731 Rock2P70336 1388 aa28.07■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Dzip1Q8BMD2 852 aa28.06■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Ltbp1Q8CG19 1712 aa28.06■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Frmpd2A0A140LI67 1392 aa28.05■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Nid2O88322 1403 aa28.05■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Ncapd2Q8K2Z4 1392 aa28.05■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Card11Q8CIS0 1159 aa28.04■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Exosc9Q9JHI7 438 aaKnown RBP28.04■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Tnks1bp1P58871 1720 aa28.04■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Znf335A2A5K6 1337 aa28.03■■■□□ 2.08
Rtn4-210ENSMUST00000170731 HdgfP51859 237 aaKnown RBP28.03■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Rtl5Q5DTT4 599 aa28.03■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Cacna1sQ02789 1880 aa28.02■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Sgsm1Q8BPQ7 1093 aa28.02■■■□□ 2.08
Rtn4-210ENSMUST00000170731 Gimap6Q8K349 305 aa27.99■■■□□ 2.07
Rtn4-210ENSMUST00000170731 Sf3b2Q3UJB0 878 aaKnown RBP27.97■■■□□ 2.07
Rtn4-210ENSMUST00000170731 TonslQ6NZL6 1363 aa27.97■■■□□ 2.07
Rtn4-210ENSMUST00000170731 Fer1l6E0CZ42 1862 aa27.94■■■□□ 2.06
Rtn4-210ENSMUST00000170731 Ncoa4Q5U4H9 625 aa27.94■■■□□ 2.06
Rtn4-210ENSMUST00000170731 Pard3Q99NH2 1333 aa27.93■■■□□ 2.06
Rtn4-210ENSMUST00000170731 Ccdc129Q14B48 1034 aa27.91■■■□□ 2.06
Rtn4-210ENSMUST00000170731 Gm21698A0A087WQP8 267 aa27.88■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Gm21671G3UY31 267 aa27.88■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Ly75Q60767 1723 aa27.87■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Kif16bB1AVY7 1312 aa27.87■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Ccdc6D3YZP9 469 aa27.86■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Slx1bQ8BX32 270 aa27.86■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Kat6bQ8BRB7 1872 aa27.86■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Cnga1P29974 684 aa27.85■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Mast2Q60592 1734 aa27.84■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Nup153E9Q3G8 1462 aaKnown RBP27.84■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Ildr2B5TVM2 661 aa27.84■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Mdc1Q5PSV9 1707 aa27.83■■■□□ 2.05
Rtn4-210ENSMUST00000170731 Chd4Q6PDQ2 1915 aaKnown RBP27.82■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Robo1O89026 1612 aa27.81■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Card10P58660 1021 aa27.79■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Gm21190A0A0G2JGJ6 266 aa27.78■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Dennd6aQ8BH65 605 aa27.77■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Pm20d1Q8C165 503 aa27.77■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Ppargc1bQ8VHJ7 1014 aa27.77■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Nlgn1Q99K10 843 aa27.77■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Zeb2Q9R0G7 1215 aa27.77■■■□□ 2.04
Rtn4-210ENSMUST00000170731 Astn2Q80Z10 1352 aa27.76■■■□□ 2.03
Rtn4-210ENSMUST00000170731 TnrQ8BYI9 1358 aa27.76■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Kcnh5Q920E3 988 aa27.76■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Ubr1O70481 1757 aa27.76■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Adamtsl1Q8BLI0 1745 aa27.75■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Sugp2Q8CH09 1067 aa27.75■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Cdk12Q14AX6 1484 aaKnown RBP27.73■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Kiaa0319Q5SZV5 1081 aa27.73■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Amotl2Q8K371 772 aa27.73■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Nckap5lQ6GQX2 1323 aa27.72■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Scn7aB1AYL1 1681 aa27.72■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Akap11E9Q777 1895 aa27.7■■■□□ 2.03
Rtn4-210ENSMUST00000170731 Dnajc10Q9DC23 793 aa27.7■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Kdm2bQ6P1G2 1309 aa27.68■■■□□ 2.02
Rtn4-210ENSMUST00000170731 CemipQ8BI06 1361 aa27.67■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Map2P20357 1828 aa27.67■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Fmnl2A2APV2 1086 aa27.66■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Taok3Q8BYC6 898 aa27.66■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Rpgrip1Q9EPQ2 1331 aa27.66■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Nwd2Q6P5U7 1742 aa27.65■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Ano8Q6PB70 1060 aa27.65■■■□□ 2.02
Rtn4-210ENSMUST00000170731 TatQ8QZR1 454 aa27.64■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Cabp4Q8VHC5 271 aa27.64■■■□□ 2.02
Rtn4-210ENSMUST00000170731 Ppp6r1Q7TSI3 856 aa27.62■■■□□ 2.01
Rtn4-210ENSMUST00000170731 Scaf1Q5U4C3 1256 aaKnown RBP27.61■■■□□ 2.01
Rtn4-210ENSMUST00000170731 RgmbQ7TQ33 436 aa27.6■■■□□ 2.01
Rtn4-210ENSMUST00000170731 FancaQ9JL70 1439 aa27.59■■■□□ 2.01
Rtn4-210ENSMUST00000170731 FocadA2AKG8 1798 aa27.59■■■□□ 2.01
Rtn4-210ENSMUST00000170731 4930523C07RikE9Q2T4 99 aa27.59■■■□□ 2.01
Rtn4-210ENSMUST00000170731 VirmaA2AIV2 1811 aaKnown RBP27.59■■■□□ 2.01
Rtn4-210ENSMUST00000170731 Nol11Q8BJW5 723 aaKnown RBP27.58■■■□□ 2.01
Rtn4-210ENSMUST00000170731 Ubap1lG3UW59 384 aa27.57■■■□□ 2
Rtn4-210ENSMUST00000170731 Slc4a1apE9PX68 744 aa27.54■■■□□ 2
Rtn4-210ENSMUST00000170731 Vps33bP59016 617 aa27.54■■■□□ 2
Rtn4-210ENSMUST00000170731 Slit1Q80TR4 1531 aa27.54■■■□□ 2
Rtn4-210ENSMUST00000170731 Uhrf1bp1lA2RSJ4 1457 aa27.53■■■□□ 2
Rtn4-210ENSMUST00000170731 Cwc22Q8C5N3 908 aaKnown RBP27.53■■■□□ 2
Rtn4-210ENSMUST00000170731 OscarQ8VBT3 265 aa27.53■■■□□ 2
Rtn4-210ENSMUST00000170731 CrklP47941 303 aa27.49■■□□□ 1.99
Rtn4-210ENSMUST00000170731 Ankrd23Q812A3 306 aa27.49■■□□□ 1.99
Rtn4-210ENSMUST00000170731 Mst1rQ62190 1378 aa27.48■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms